BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00033923
         (728 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003638527.1| Zinc finger CCCH domain-containing protein [...    85   2e-14
ref|XP_003549835.1| PREDICTED: zinc finger CCCH domain-containin...    81   3e-13
ref|XP_003525622.1| PREDICTED: zinc finger CCCH domain-containin...    80   4e-13
ref|XP_002511264.1| nucleic acid binding protein, putative [Rici...    79   1e-12
ref|XP_003522417.1| PREDICTED: zinc finger CCCH domain-containin...    78   2e-12

>ref|XP_003638527.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
           gi|355504462|gb|AES85665.1| Zinc finger CCCH
           domain-containing protein [Medicago truncatula]
          Length = 511

 Score = 84.7 bits (208), Expect = 2e-14
 Identities = 44/115 (38%), Positives = 60/115 (52%), Gaps = 4/115 (3%)
 Frame = -3

Query: 381 EELLHPPEWNTHPLSVVDPMEKGDDSRCNQKEIPTEEAPQDYSRIVCPFLISYGECQLDT 202
           E  +HPP     P +V +P  + +      K  P EE P+      C F +  G+C+  +
Sbjct: 367 ERSMHPPS----PYAVNNPAMEMNAYMHRHKHTPVEEFPERPGEPECSFFLKTGDCKFKS 422

Query: 201 -CMFQHPE---VYVPTCVLTSVGLPLRPGTKVCPAFRLWGICKLGRSCKYDHPQN 49
            C F HP+     +P C L+  GLPLRPG  VC  +  +GICK G +CKYDHP N
Sbjct: 423 HCKFHHPKNRITKLPPCNLSDKGLPLRPGQNVCTHYSRYGICKFGPACKYDHPIN 477


>ref|XP_003549835.1| PREDICTED: zinc finger CCCH domain-containing protein 43-like
           [Glycine max]
          Length = 501

 Score = 80.9 bits (198), Expect = 3e-13
 Identities = 44/127 (34%), Positives = 65/127 (51%), Gaps = 7/127 (5%)
 Frame = -3

Query: 408 TQVPECKAPEELLHPPEWNTHPLSVVDPMEKGDDSRC---NQKEIPTEEAPQDYSRIVCP 238
           TQ  +    +  ++ PE N HP S         D+     +QK++P +E P+      C 
Sbjct: 334 TQSSDWNGYQASVYLPERNMHPPSTFVMNNPAIDTNVYMHHQKQMPVDEFPERPGEPECS 393

Query: 237 FLISYGECQLDT-CMFQHPEVYV---PTCVLTSVGLPLRPGTKVCPAFRLWGICKLGRSC 70
           + +  G+C+  + C F HP+  V   P C L+  GLPLRP   VC  +  +GICK G +C
Sbjct: 394 YFLKTGDCKFKSNCKFNHPKNRVARLPPCNLSDKGLPLRPDQSVCSHYSRYGICKFGPAC 453

Query: 69  KYDHPQN 49
           K+DHP N
Sbjct: 454 KFDHPIN 460


>ref|XP_003525622.1| PREDICTED: zinc finger CCCH domain-containing protein 43-like
           [Glycine max]
          Length = 490

 Score = 80.1 bits (196), Expect = 4e-13
 Identities = 44/127 (34%), Positives = 65/127 (51%), Gaps = 7/127 (5%)
 Frame = -3

Query: 408 TQVPECKAPEELLHPPEWNTHPLSVVDPMEKGDDSRC---NQKEIPTEEAPQDYSRIVCP 238
           TQ  +    +  ++ PE + HP S         D+     +QK++P +E P+      C 
Sbjct: 324 TQSSDWNGYQASVYLPERSIHPPSTFVMNNPAIDTNVYMHHQKQMPVDEFPERPGEPECS 383

Query: 237 FLISYGECQLDT-CMFQHPEVYV---PTCVLTSVGLPLRPGTKVCPAFRLWGICKLGRSC 70
           F +  G+C+  + C F HP+  V   P C L+  GLPLRP   VC  +  +GICK G +C
Sbjct: 384 FFLKTGDCKFKSNCKFHHPKNRVTRLPPCNLSDKGLPLRPDQSVCSHYSRYGICKFGPAC 443

Query: 69  KYDHPQN 49
           K+DHP N
Sbjct: 444 KFDHPIN 450


>ref|XP_002511264.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223550379|gb|EEF51866.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 495

 Score = 78.6 bits (192), Expect = 1e-12
 Identities = 39/122 (31%), Positives = 62/122 (50%), Gaps = 19/122 (15%)
 Frame = -3

Query: 363 PEWNTH---------------PLSVVDPMEKGDDSRCNQKEIPTEEAPQDYSRIVCPFLI 229
           PEWN +               P  V+       +   +Q++I  EE P+   +  C + +
Sbjct: 330 PEWNGYQVCYFPLYERSMHQPPAYVISNPATDTNVYAHQQQIQVEEFPERPGQPECSYFM 389

Query: 228 SYGECQLDT-CMFQHPEVYV---PTCVLTSVGLPLRPGTKVCPAFRLWGICKLGRSCKYD 61
             G+C+  + C + HP+ ++   P CVL+  GLPLRPG  +C  +  +GICK G +CK+D
Sbjct: 390 KTGDCKFKSNCKYHHPKNHISKSPPCVLSDKGLPLRPGQNICSYYSRYGICKFGPACKFD 449

Query: 60  HP 55
           HP
Sbjct: 450 HP 451


>ref|XP_003522417.1| PREDICTED: zinc finger CCCH domain-containing protein 43-like
           [Glycine max]
          Length = 570

 Score = 78.2 bits (191), Expect = 2e-12
 Identities = 41/113 (36%), Positives = 64/113 (56%), Gaps = 4/113 (3%)
 Frame = -3

Query: 381 EELLHPPEWNTHPLSVVDPMEKGDDSRCNQKEIPTEEAPQDYSRIVCPFLISYGECQLDT 202
           E  LHPP  +T+ ++  +P  + +    +QK++  EE P+      C + +  G+C+  +
Sbjct: 426 ERSLHPP--STYVMN--NPAMESNVYMHHQKQMLVEEFPERPGEPECSYFLKTGDCKFKS 481

Query: 201 -CMFQHPE---VYVPTCVLTSVGLPLRPGTKVCPAFRLWGICKLGRSCKYDHP 55
            C F HP+     +P C L+  GLPLRP   VC  +R +GICK G +CK+DHP
Sbjct: 482 NCKFHHPKNRIARLPLCNLSDKGLPLRPDQNVCTYYRRYGICKFGPACKFDHP 534