BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00033898
         (512 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279701.2| PREDICTED: pentatricopeptide repeat-containi...   168   5e-40
emb|CBI20513.3| unnamed protein product [Vitis vinifera]              168   5e-40
ref|XP_002522838.1| pentatricopeptide repeat-containing protein,...   156   1e-36
dbj|BAD07992.1| putative pentatricopeptide (PPR) repeat-containi...   151   5e-35
ref|NP_001172787.1| Os02g0132600 [Oryza sativa Japonica Group] g...   151   5e-35

>ref|XP_002279701.2| PREDICTED: pentatricopeptide repeat-containing protein At4g04790,
            mitochondrial-like [Vitis vinifera]
          Length = 848

 Score =  168 bits (425), Expect = 5e-40
 Identities = 88/173 (50%), Positives = 120/173 (69%), Gaps = 3/173 (1%)
 Frame = +3

Query: 3    IYCIRHNHLSSAINLLKQLKD---QDKMSTYAVLDQVFCQIFEMNPIDLQIGLXXXXXXX 173
            +YC+R+NHLSSAI+LLKQLKD    ++++  A+LD+VF  I E+ P++L+IGL       
Sbjct: 680  LYCVRYNHLSSAIDLLKQLKDTFHDNELAMEAILDEVFSLIAEIEPVNLKIGL------- 732

Query: 174  XXXXXXXXXDLLQAIKEELKLCLSRNSLDFLLSACVNAKDPLCGKLVWEEYQKAGLSYNV 353
                     DLL AIKEEL L  SR SLDFLL+ACVN KD    +L+W EYQ AG ++NV
Sbjct: 733  ---------DLLTAIKEELGLRPSRKSLDFLLAACVNGKDLDNSRLIWREYQTAGFTHNV 783

Query: 354  LTYIRMYRLHLACGEHKNANKVLKKISKDDPHVRSIIGACELTFSRSKSMRRK 512
            L+++RMY+  LACG+HK+A  +L KI KDDPHV  +I AC+ T+++S    +K
Sbjct: 784  LSFLRMYQACLACGDHKSAANILHKIPKDDPHVCCVIKACQTTYAKSSVKGKK 836


>emb|CBI20513.3| unnamed protein product [Vitis vinifera]
          Length = 618

 Score =  168 bits (425), Expect = 5e-40
 Identities = 88/173 (50%), Positives = 120/173 (69%), Gaps = 3/173 (1%)
 Frame = +3

Query: 3   IYCIRHNHLSSAINLLKQLKD---QDKMSTYAVLDQVFCQIFEMNPIDLQIGLXXXXXXX 173
           +YC+R+NHLSSAI+LLKQLKD    ++++  A+LD+VF  I E+ P++L+IGL       
Sbjct: 450 LYCVRYNHLSSAIDLLKQLKDTFHDNELAMEAILDEVFSLIAEIEPVNLKIGL------- 502

Query: 174 XXXXXXXXXDLLQAIKEELKLCLSRNSLDFLLSACVNAKDPLCGKLVWEEYQKAGLSYNV 353
                    DLL AIKEEL L  SR SLDFLL+ACVN KD    +L+W EYQ AG ++NV
Sbjct: 503 ---------DLLTAIKEELGLRPSRKSLDFLLAACVNGKDLDNSRLIWREYQTAGFTHNV 553

Query: 354 LTYIRMYRLHLACGEHKNANKVLKKISKDDPHVRSIIGACELTFSRSKSMRRK 512
           L+++RMY+  LACG+HK+A  +L KI KDDPHV  +I AC+ T+++S    +K
Sbjct: 554 LSFLRMYQACLACGDHKSAANILHKIPKDDPHVCCVIKACQTTYAKSSVKGKK 606


>ref|XP_002522838.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223537922|gb|EEF39536.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 867

 Score =  156 bits (395), Expect = 1e-36
 Identities = 82/169 (48%), Positives = 111/169 (65%), Gaps = 3/169 (1%)
 Frame = +3

Query: 3    IYCIRHNHLSSAINLLKQLKDQ---DKMSTYAVLDQVFCQIFEMNPIDLQIGLXXXXXXX 173
            ++CIR+ HLSSA+NLLKQLKD+   D+++   + D+VF  I EM P DL IGL       
Sbjct: 709  LWCIRNKHLSSAVNLLKQLKDRLSSDELTMQVIFDEVFSLIAEMEPTDLLIGL------- 761

Query: 174  XXXXXXXXXDLLQAIKEELKLCLSRNSLDFLLSACVNAKDPLCGKLVWEEYQKAGLSYNV 353
                     DLLQ IK+EL +C SR SLDFLLSAC  AKD      +W+EY  AG  YNV
Sbjct: 762  ---------DLLQVIKDELCVCPSRKSLDFLLSACAKAKDLTNSLFIWKEYHAAGYPYNV 812

Query: 354  LTYIRMYRLHLACGEHKNANKVLKKISKDDPHVRSIIGACELTFSRSKS 500
            ++Y+RMY+  L+ G++++A  +L +I KDDPHVR +I AC+ T+ +S S
Sbjct: 813  ISYLRMYQALLSSGDYRSAKVILAEIQKDDPHVRRMIQACQKTYIQSHS 861


>dbj|BAD07992.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
            sativa Japonica Group] gi|222622115|gb|EEE56247.1|
            hypothetical protein OsJ_05263 [Oryza sativa Japonica
            Group]
          Length = 889

 Score =  151 bits (382), Expect = 5e-35
 Identities = 82/179 (45%), Positives = 117/179 (65%), Gaps = 10/179 (5%)
 Frame = +3

Query: 3    IYCIRHNHLSSAINLLKQLKDQDKMSTYAVLDQVFCQIFEMNPIDLQIGLXXXXXXXXXX 182
            +YC++HNH ++AI LLKQLK++D++STY V+DQVF QI++M+P++L  G+          
Sbjct: 698  LYCVQHNHPNAAIGLLKQLKEKDELSTYMVIDQVFSQIWDMDPVNLDFGMK--------- 748

Query: 183  XXXXXXDLLQAIKEELKLCLSRNSLDFLLSACVNAKDPLCGKLVWEEYQKAGLSYNVLTY 362
                   +L A+KE L L +SR SLDFLLSACV AKD    +L+W EY+ AGL +NVLT 
Sbjct: 749  -------ILHAVKE-LGLNVSRTSLDFLLSACVKAKDSNRAQLIWTEYESAGLPHNVLTS 800

Query: 363  IRMYRLHLACGEHKNANKVLKKISKDDPHVRSIIGACELTF----------SRSKSMRR 509
            +RMY+  L   + K   K+L+KI K+D HVR II +C++ +          SRS S++R
Sbjct: 801  LRMYQALLLSQKKKATKKLLRKIPKEDVHVRYIIDSCQMAYCSQNLKLPSASRSSSIKR 859


>ref|NP_001172787.1| Os02g0132600 [Oryza sativa Japonica Group]
           gi|255670575|dbj|BAH91516.1| Os02g0132600 [Oryza sativa
           Japonica Group]
          Length = 385

 Score =  151 bits (382), Expect = 5e-35
 Identities = 82/179 (45%), Positives = 117/179 (65%), Gaps = 10/179 (5%)
 Frame = +3

Query: 3   IYCIRHNHLSSAINLLKQLKDQDKMSTYAVLDQVFCQIFEMNPIDLQIGLXXXXXXXXXX 182
           +YC++HNH ++AI LLKQLK++D++STY V+DQVF QI++M+P++L  G+          
Sbjct: 194 LYCVQHNHPNAAIGLLKQLKEKDELSTYMVIDQVFSQIWDMDPVNLDFGMK--------- 244

Query: 183 XXXXXXDLLQAIKEELKLCLSRNSLDFLLSACVNAKDPLCGKLVWEEYQKAGLSYNVLTY 362
                  +L A+KE L L +SR SLDFLLSACV AKD    +L+W EY+ AGL +NVLT 
Sbjct: 245 -------ILHAVKE-LGLNVSRTSLDFLLSACVKAKDSNRAQLIWTEYESAGLPHNVLTS 296

Query: 363 IRMYRLHLACGEHKNANKVLKKISKDDPHVRSIIGACELTF----------SRSKSMRR 509
           +RMY+  L   + K   K+L+KI K+D HVR II +C++ +          SRS S++R
Sbjct: 297 LRMYQALLLSQKKKATKKLLRKIPKEDVHVRYIIDSCQMAYCSQNLKLPSASRSSSIKR 355