BLASTX nr result

ID: Cimicifuga21_contig00033891 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00033891
         (314 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21348.3| unnamed protein product [Vitis vinifera]               90   2e-16
ref|XP_002967167.1| hypothetical protein SELMODRAFT_86596 [Selag...    72   4e-11
ref|XP_002298629.1| predicted protein [Populus trichocarpa] gi|2...    72   6e-11
ref|XP_002509512.1| conserved hypothetical protein [Ricinus comm...    67   1e-09
ref|XP_001767085.1| predicted protein [Physcomitrella patens sub...    67   2e-09

>emb|CBI21348.3| unnamed protein product [Vitis vinifera]
          Length = 491

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 48/83 (57%), Positives = 51/83 (61%)
 Frame = +1

Query: 64  WKDFEMNLFWXXXXXXXXXXXXXXXXXXXXXXXXXSVHVALSVPRFELFLLIFMIPCISQ 243
           W+D EMNLFW                         S H  LSVPRFELFLLI M+PCISQ
Sbjct: 7   WEDLEMNLFWLGVGGGSLIIIHILILIFLRWRTGTSAHGILSVPRFELFLLILMLPCISQ 66

Query: 244 SSALVIRGGTTKGIIVGSLLLAI 312
           SSA VIRGGTT GIIVG+LLLAI
Sbjct: 67  SSAFVIRGGTTGGIIVGALLLAI 89


>ref|XP_002967167.1| hypothetical protein SELMODRAFT_86596 [Selaginella moellendorffii]
           gi|300165158|gb|EFJ31766.1| hypothetical protein
           SELMODRAFT_86596 [Selaginella moellendorffii]
          Length = 760

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 37/84 (44%), Positives = 46/84 (54%)
 Frame = +1

Query: 61  RWKDFEMNLFWXXXXXXXXXXXXXXXXXXXXXXXXXSVHVALSVPRFELFLLIFMIPCIS 240
           RW DF  N+FW                         ++  AL VPRFE+FLL   +PCI 
Sbjct: 251 RWNDFGKNMFWLGVFGGGFVLFHLLLLYFLRWRTEATLRGALCVPRFEIFLLYVALPCIC 310

Query: 241 QSSALVIRGGTTKGIIVGSLLLAI 312
           Q++A +IRGGTT GIIVG LLLA+
Sbjct: 311 QAAAFIIRGGTTGGIIVGVLLLAV 334


>ref|XP_002298629.1| predicted protein [Populus trichocarpa] gi|222845887|gb|EEE83434.1|
           predicted protein [Populus trichocarpa]
          Length = 1156

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 36/83 (43%), Positives = 45/83 (54%)
 Frame = +1

Query: 64  WKDFEMNLFWXXXXXXXXXXXXXXXXXXXXXXXXXSVHVALSVPRFELFLLIFMIPCISQ 243
           W+D E NLFW                               SVPRFEL LLI M+PCISQ
Sbjct: 665 WQDLEKNLFWLGVGGGSLLIIHVLTLLFLRWRTGAPAQGIFSVPRFELLLLILMLPCISQ 724

Query: 244 SSALVIRGGTTKGIIVGSLLLAI 312
           SSA V++GG+ +GII+G+LLL +
Sbjct: 725 SSAFVMKGGSPRGIIIGALLLVV 747


>ref|XP_002509512.1| conserved hypothetical protein [Ricinus communis]
           gi|223549411|gb|EEF50899.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1095

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 38/84 (45%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
 Frame = +1

Query: 64  WKDFEMNLFWXXXXXXXXXXXXXXXXXXXXXXXXXS-VHVALSVPRFELFLLIFMIPCIS 240
           W+D EMNLF+                         S  H  LS PRFEL LLI  +PC+S
Sbjct: 612 WEDLEMNLFFLGVGGGSLFMIHILILLFLRWRIGASSAHGILSFPRFELLLLILALPCVS 671

Query: 241 QSSALVIRGGTTKGIIVGSLLLAI 312
           Q+SA V+RGGT  GII G+LLL I
Sbjct: 672 QASAFVMRGGTVGGIITGALLLVI 695


>ref|XP_001767085.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162681581|gb|EDQ68006.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 876

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 35/86 (40%), Positives = 47/86 (54%)
 Frame = +1

Query: 55  LNRWKDFEMNLFWXXXXXXXXXXXXXXXXXXXXXXXXXSVHVALSVPRFELFLLIFMIPC 234
           L+RW+DFE N+FW                         S+  AL  PR ELF L+ ++P 
Sbjct: 519 LSRWQDFERNIFWICVVGGSFCLLHILVLQFLRRRSKSSLRGALIFPRPELFFLVLVMPG 578

Query: 235 ISQSSALVIRGGTTKGIIVGSLLLAI 312
           + Q+SA +IRGGTT GI +G LLL+I
Sbjct: 579 LCQASAFIIRGGTTVGIAIGVLLLSI 604


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