BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00033853
         (428 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003548358.1| PREDICTED: DNA topoisomerase 2-binding prote...   172   3e-41
ref|XP_002284611.2| PREDICTED: DNA topoisomerase 2-binding prote...   167   6e-40
emb|CBI18968.3| unnamed protein product [Vitis vinifera]              165   4e-39
ref|XP_002520311.1| topbp1, putative [Ricinus communis] gi|22354...   161   6e-38
dbj|BAJ53188.1| JMS09K11.6 [Jatropha curcas]                          158   4e-37

>ref|XP_003548358.1| PREDICTED: DNA topoisomerase 2-binding protein 1-A-like [Glycine
           max]
          Length = 970

 Score =  172 bits (436), Expect = 3e-41
 Identities = 86/141 (60%), Positives = 111/141 (78%), Gaps = 1/141 (0%)
 Frame = +3

Query: 3   AVSDSTIFTKDEDSEAPNLQAGDDTNFDGFVADDSETEDDDSYLSDCRIFFVGFQASELR 182
           +VS+  +F K+ DSE   LQ   + NFDG VA+DSE++D+D YLS+CRI  VGF+A E+R
Sbjct: 334 SVSNVPLFAKEADSEPLPLQTCSELNFDGAVANDSESDDNDLYLSECRILLVGFEACEMR 393

Query: 183 KLVKLVQKGGGSRCMSFSEQKMTHIIVGTPSENEKKEIRHHAALGVIYVVKTVWLEDCDR 362
           KLV +V+KGGGSR MSF++ K+THI++G P+E EKK++R  AALGVIYVVKT WLEDCDR
Sbjct: 394 KLVNMVRKGGGSRYMSFND-KLTHIVIGNPTEMEKKDVRSLAALGVIYVVKTAWLEDCDR 452

Query: 363 IKKEVPVSQRHVC-DSLLPKA 422
            KK+VPV +RH+  D L PKA
Sbjct: 453 EKKQVPVLRRHIAYDLLYPKA 473


>ref|XP_002284611.2| PREDICTED: DNA topoisomerase 2-binding protein 1-B-like [Vitis
           vinifera]
          Length = 962

 Score =  167 bits (424), Expect = 6e-40
 Identities = 85/137 (62%), Positives = 105/137 (76%), Gaps = 1/137 (0%)
 Frame = +3

Query: 12  DSTIFTKDEDSEAPNLQAGDDTNFDGFVADDSETEDDDSYLSDCRIFFVGFQASELRKLV 191
           D+ IF K+ ++  P +Q  D+   DG VADDS+TED D YLSDCRI  VGF+ASE+RKLV
Sbjct: 305 DAPIFIKEGETREPAMQDKDENKLDGLVADDSQTEDSDLYLSDCRILLVGFEASEMRKLV 364

Query: 192 KLVQKGGGSRCMSFSEQKMTHIIVGTPSENEKKEIRHHAALGVIYVVKTVWLEDCDRIKK 371
            +V++GGGSR MSF+E K+THI+VGTPSE EKK +R  AA GVI VV+T+WLEDCD  KK
Sbjct: 365 NMVRRGGGSRYMSFNE-KLTHIVVGTPSEVEKKVVRGLAATGVISVVRTIWLEDCDHEKK 423

Query: 372 EVPVSQRHVC-DSLLPK 419
           EV V +RH+  D LLPK
Sbjct: 424 EVSVLRRHIAHDLLLPK 440


>emb|CBI18968.3| unnamed protein product [Vitis vinifera]
          Length = 952

 Score =  165 bits (417), Expect = 4e-39
 Identities = 85/138 (61%), Positives = 104/138 (75%), Gaps = 1/138 (0%)
 Frame = +3

Query: 9   SDSTIFTKDEDSEAPNLQAGDDTNFDGFVADDSETEDDDSYLSDCRIFFVGFQASELRKL 188
           S S+    D + +AP +Q  D+   DG VADDS+TED D YLSDCRI  VGF+ASE+RKL
Sbjct: 304 SASSSLAADSNLQAPAMQDKDENKLDGLVADDSQTEDSDLYLSDCRILLVGFEASEMRKL 363

Query: 189 VKLVQKGGGSRCMSFSEQKMTHIIVGTPSENEKKEIRHHAALGVIYVVKTVWLEDCDRIK 368
           V +V++GGGSR MSF+E K+THI+VGTPSE EKK +R  AA GVI VV+T+WLEDCD  K
Sbjct: 364 VNMVRRGGGSRYMSFNE-KLTHIVVGTPSEVEKKVVRGLAATGVISVVRTIWLEDCDHEK 422

Query: 369 KEVPVSQRHVC-DSLLPK 419
           KEV V +RH+  D LLPK
Sbjct: 423 KEVSVLRRHIAHDLLLPK 440


>ref|XP_002520311.1| topbp1, putative [Ricinus communis] gi|223540530|gb|EEF42097.1|
           topbp1, putative [Ricinus communis]
          Length = 950

 Score =  161 bits (407), Expect = 6e-38
 Identities = 82/138 (59%), Positives = 107/138 (77%), Gaps = 1/138 (0%)
 Frame = +3

Query: 9   SDSTIFTKDEDSEAPNLQAGDDTNFDGFVADDSETEDDDSYLSDCRIFFVGFQASELRKL 188
           SD  +  K+ D+E P +   ++TN DG VA+DS++ED D YLS+CRI  VGF+ASELRKL
Sbjct: 298 SDPPVSVKEWDNEVPAVHPTNETNLDGCVANDSQSEDSDLYLSECRISLVGFEASELRKL 357

Query: 189 VKLVQKGGGSRCMSFSEQKMTHIIVGTPSENEKKEIRHHAALGVIYVVKTVWLEDCDRIK 368
           V +V++GGGSR +SF++ K+THI+VG P+E EKKE+R  AALGVI VV+  WLEDCDR K
Sbjct: 358 VNMVRRGGGSRYLSFND-KLTHIVVGAPTEVEKKELRGLAALGVIDVVRPTWLEDCDRQK 416

Query: 369 KEVPVSQRHVC-DSLLPK 419
           KEVPV ++H+  D LLPK
Sbjct: 417 KEVPVIRQHLAYDLLLPK 434


>dbj|BAJ53188.1| JMS09K11.6 [Jatropha curcas]
          Length = 918

 Score =  158 bits (400), Expect = 4e-37
 Identities = 81/138 (58%), Positives = 106/138 (76%), Gaps = 1/138 (0%)
 Frame = +3

Query: 9   SDSTIFTKDEDSEAPNLQAGDDTNFDGFVADDSETEDDDSYLSDCRIFFVGFQASELRKL 188
           SD  IF K+ D + P +   ++TN D  VA+DS++ED D YLS+CRI  VGF+ASELRKL
Sbjct: 296 SDPPIFMKEGDKQMPAVHPINETNLDVCVANDSQSEDSDLYLSECRISLVGFEASELRKL 355

Query: 189 VKLVQKGGGSRCMSFSEQKMTHIIVGTPSENEKKEIRHHAALGVIYVVKTVWLEDCDRIK 368
           V +V++GGGSR MSF++ K+THI+VG P+E EKKE+R  AALGVI VV+ VWLE+CD  K
Sbjct: 356 VNMVRRGGGSRYMSFND-KLTHIVVGAPTEVEKKELRGLAALGVINVVRPVWLEECDHEK 414

Query: 369 KEVPVSQRHVC-DSLLPK 419
           KE+PV ++H+  D LLPK
Sbjct: 415 KEIPVLRQHIAYDLLLPK 432