BLASTX nr result

ID: Cimicifuga21_contig00033841 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00033841
         (526 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304873.1| predicted protein [Populus trichocarpa] gi|2...   100   2e-19
ref|XP_002271561.1| PREDICTED: uncharacterized protein LOC100244...   100   2e-19
ref|XP_002530868.1| conserved hypothetical protein [Ricinus comm...    97   1e-18
ref|XP_002299130.1| predicted protein [Populus trichocarpa] gi|2...    96   2e-18
emb|CCH50953.1| T1.1 [Malus x robusta]                                 90   2e-16

>ref|XP_002304873.1| predicted protein [Populus trichocarpa] gi|222842305|gb|EEE79852.1|
           predicted protein [Populus trichocarpa]
          Length = 313

 Score =  100 bits (248), Expect = 2e-19
 Identities = 51/94 (54%), Positives = 65/94 (69%), Gaps = 2/94 (2%)
 Frame = +2

Query: 5   VVRCEGDHALHRAKSLVNIQFSWILTLVSIFAMLFYLIMTKLYVEKVEYWTIGSVDT--G 178
           VVRC G+ ALHRAKSLVNIQFSW+L  + IF M FYL + KLY ++ EY T+   +    
Sbjct: 220 VVRCHGEEALHRAKSLVNIQFSWLLIAIIIFVMSFYLFLVKLYGDEAEYSTLTKENLLYE 279

Query: 179 EDSEDIESQKKTHNESTTSFIHIGKGSEPMDMER 280
           EDS+D+ESQK +      SF+ IG+G  P+DMER
Sbjct: 280 EDSDDVESQKGSKVGEKKSFMEIGRGFVPIDMER 313


>ref|XP_002271561.1| PREDICTED: uncharacterized protein LOC100244332 [Vitis vinifera]
           gi|296085464|emb|CBI29196.3| unnamed protein product
           [Vitis vinifera]
          Length = 306

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 50/92 (54%), Positives = 67/92 (72%)
 Frame = +2

Query: 5   VVRCEGDHALHRAKSLVNIQFSWILTLVSIFAMLFYLIMTKLYVEKVEYWTIGSVDTGED 184
           VV C    ALHRAKSLVNI+FSW++  + IFAM FYL + ++Y EKVEYW++G  +  ED
Sbjct: 220 VVNCSDTEALHRAKSLVNIEFSWLVVGMMIFAMSFYLFLARVYREKVEYWSLGREEGRED 279

Query: 185 SEDIESQKKTHNESTTSFIHIGKGSEPMDMER 280
            ED+ESQKK++ E    F+H+GK +  MD+ER
Sbjct: 280 DEDLESQKKSNLE----FVHMGK-TYAMDIER 306


>ref|XP_002530868.1| conserved hypothetical protein [Ricinus communis]
           gi|223529557|gb|EEF31508.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 258

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 50/103 (48%), Positives = 67/103 (65%), Gaps = 11/103 (10%)
 Frame = +2

Query: 5   VVRCEGDHALHRAKSLVNIQFSWILTLVSIFAMLFYLIMTKLYVEKVEYWTIGSV----- 169
           VVRC G+ +LHRAKSLVNIQFSW L  ++I  M FYL++ K Y EKVEY ++        
Sbjct: 156 VVRCSGEESLHRAKSLVNIQFSWFLIGITILVMCFYLVLLKYYGEKVEYTSLTKAEDQLL 215

Query: 170 --DTGEDSEDIESQKKTHNE----STTSFIHIGKGSEPMDMER 280
             D+ E   D+ESQKK   +    +++SF+HIG+   P+DMER
Sbjct: 216 EEDSSESDRDVESQKKVTTKFGANNSSSFMHIGRSFAPIDMER 258


>ref|XP_002299130.1| predicted protein [Populus trichocarpa] gi|222846388|gb|EEE83935.1|
           predicted protein [Populus trichocarpa]
          Length = 314

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 49/95 (51%), Positives = 63/95 (66%), Gaps = 3/95 (3%)
 Frame = +2

Query: 5   VVRCEGDHALHRAKSLVNIQFSWILTLVSIFAMLFYLIMTKLYVEKVEYWTIGSVD---T 175
           VVRC  + ALHRAKSLVNIQFSW+L  ++IF MLFYL++ K Y +KVEY T+   +    
Sbjct: 220 VVRCHDNEALHRAKSLVNIQFSWLLIAITIFVMLFYLVLVKFYGDKVEYSTLTREEDQLP 279

Query: 176 GEDSEDIESQKKTHNESTTSFIHIGKGSEPMDMER 280
            +D +D+ESQK        SF+   KG  P+DMER
Sbjct: 280 DDDLDDVESQKSKKVGDKKSFMDFEKGFAPIDMER 314


>emb|CCH50953.1| T1.1 [Malus x robusta]
          Length = 316

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 49/97 (50%), Positives = 70/97 (72%), Gaps = 5/97 (5%)
 Frame = +2

Query: 5   VVRCEGDHALHRAKSLVNIQFSWILTLVSIFAMLFYLIMTKLYVEKVEYWTIGSV--DTG 178
           VVRC GD A HRAKSLVN+QFSW L  ++IF + FYL++ K+Y EKVEY+++  +  +  
Sbjct: 220 VVRCHGDEARHRAKSLVNLQFSWFLVGIAIFGVSFYLVLVKVYGEKVEYFSLTRLREEDE 279

Query: 179 EDSE-DIESQKKTHNESTTSFI-HIGKGS-EPMDMER 280
           ED++ D+ESQK +    + SF+ H+GK +  P+DMER
Sbjct: 280 EDTDLDVESQKISKLGDSKSFVNHMGKTAFAPIDMER 316


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