BLASTX nr result

ID: Cimicifuga21_contig00033833 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00033833
         (338 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520135.1| voltage-dependent anion-selective channel, p...    71   1e-10
gb|AFK39621.1| unknown [Lotus japonicus]                               69   4e-10
gb|AAQ87019.1| VDAC1.1 [Lotus japonicus] gi|388505354|gb|AFK4074...    69   4e-10
ref|XP_004147460.1| PREDICTED: mitochondrial outer membrane prot...    69   5e-10
ref|XP_003554316.1| PREDICTED: mitochondrial outer membrane prot...    68   9e-10

>ref|XP_002520135.1| voltage-dependent anion-selective channel, putative [Ricinus
           communis] gi|223540627|gb|EEF42190.1| voltage-dependent
           anion-selective channel, putative [Ricinus communis]
          Length = 276

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 38/87 (43%), Positives = 52/87 (59%), Gaps = 3/87 (3%)
 Frame = +3

Query: 87  LCQLLRNNWGDTMNASYYHVVS---RTTLGAELVHNFSSNMSTLAIRT*HAWCDSTIVKI 257
           +  L  N+ GDT+NASYYH+VS    T +GAEL H+FSSN +TL   T HA    T VK 
Sbjct: 170 IASLTLNDKGDTLNASYYHIVSPLTNTAVGAELTHSFSSNENTLTFGTQHALDPLTTVKA 229

Query: 258 CVSIFSKMSVFLRH*FHANSFLSVHGE 338
            V+ + K S  ++H +   S  ++ GE
Sbjct: 230 RVNSYGKASALIQHEWRPKSLFTISGE 256


>gb|AFK39621.1| unknown [Lotus japonicus]
          Length = 276

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 37/87 (42%), Positives = 52/87 (59%), Gaps = 3/87 (3%)
 Frame = +3

Query: 87  LCQLLRNNWGDTMNASYYHVVS---RTTLGAELVHNFSSNMSTLAIRT*HAWCDSTIVKI 257
           +  L  N+ GD +NASYYHVVS    T +GAE+ H FS+N +TL + T HA    T +K 
Sbjct: 170 IAALTLNDRGDALNASYYHVVSPLTNTAVGAEVTHRFSTNENTLTLGTQHALDPLTTLKA 229

Query: 258 CVSIFSKMSVFLRH*FHANSFLSVHGE 338
            V+ F K S  ++H +   SF ++ GE
Sbjct: 230 RVNNFGKASALIQHEWRPKSFFTISGE 256


>gb|AAQ87019.1| VDAC1.1 [Lotus japonicus] gi|388505354|gb|AFK40743.1| unknown
           [Lotus japonicus]
          Length = 276

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 37/87 (42%), Positives = 52/87 (59%), Gaps = 3/87 (3%)
 Frame = +3

Query: 87  LCQLLRNNWGDTMNASYYHVVS---RTTLGAELVHNFSSNMSTLAIRT*HAWCDSTIVKI 257
           +  L  N+ GD +NASYYHVVS    T +GAE+ H FS+N +TL + T HA    T +K 
Sbjct: 170 IAALTLNDKGDALNASYYHVVSPLTNTAVGAEVTHRFSTNENTLTLGTQHALDPLTTLKA 229

Query: 258 CVSIFSKMSVFLRH*FHANSFLSVHGE 338
            V+ F K S  ++H +   SF ++ GE
Sbjct: 230 RVNNFGKASALIQHEWRPKSFFTISGE 256


>ref|XP_004147460.1| PREDICTED: mitochondrial outer membrane protein porin of 34
           kDa-like [Cucumis sativus]
           gi|449523227|ref|XP_004168625.1| PREDICTED:
           mitochondrial outer membrane protein porin of 34
           kDa-like [Cucumis sativus]
          Length = 276

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 37/87 (42%), Positives = 53/87 (60%), Gaps = 3/87 (3%)
 Frame = +3

Query: 87  LCQLLRNNWGDTMNASYYHVVS---RTTLGAELVHNFSSNMSTLAIRT*HAWCDSTIVKI 257
           +  L  N+ GDT++ASYYH V+    T +GAE+ H+FSSN +T+ + T HA    T VK 
Sbjct: 170 IASLTLNDKGDTLSASYYHTVNPLTSTAVGAEVAHSFSSNENTITVGTQHALDPLTSVKA 229

Query: 258 CVSIFSKMSVFLRH*FHANSFLSVHGE 338
            V+ F K S  ++H +   SF +V GE
Sbjct: 230 RVNNFGKASALIQHEWRPKSFFTVSGE 256


>ref|XP_003554316.1| PREDICTED: mitochondrial outer membrane protein porin of 34 kDa
           [Glycine max]
          Length = 276

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 36/87 (41%), Positives = 52/87 (59%), Gaps = 3/87 (3%)
 Frame = +3

Query: 87  LCQLLRNNWGDTMNASYYHVVSR---TTLGAELVHNFSSNMSTLAIRT*HAWCDSTIVKI 257
           +  L  NN GD++NASYYH V+R   T +GAE+ H FS+N +TL + T HA    T VK 
Sbjct: 170 VASLTVNNKGDSLNASYYHTVNRLTNTAVGAEVTHQFSTNENTLTLGTQHALDPLTTVKA 229

Query: 258 CVSIFSKMSVFLRH*FHANSFLSVHGE 338
            V+   K +  ++H +   SF ++ GE
Sbjct: 230 RVNNLGKANALIQHEWRPRSFFTISGE 256


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