BLASTX nr result

ID: Cimicifuga21_contig00033806 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00033806
         (340 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516134.1| conserved hypothetical protein [Ricinus comm...    64   1e-08
ref|XP_002279983.2| PREDICTED: F-box/LRR-repeat protein 15-like ...    60   2e-07
emb|CBI20722.3| unnamed protein product [Vitis vinifera]               60   2e-07
ref|XP_003526056.1| PREDICTED: F-box/LRR-repeat protein 15-like ...    59   5e-07
ref|XP_002324196.1| predicted protein [Populus trichocarpa] gi|2...    58   7e-07

>ref|XP_002516134.1| conserved hypothetical protein [Ricinus communis]
            gi|223544620|gb|EEF46136.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 997

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 29/46 (63%), Positives = 36/46 (78%)
 Frame = -1

Query: 340  SCSIAEEELEAVVSRCSMLETLDFRYCPKIYPGIMEMLRTVCPNLQ 203
            SC+I EE++EA +SRCSMLETLD R+CPKIY   M  LR  CP+L+
Sbjct: 943  SCNIDEEDVEAAISRCSMLETLDVRFCPKIYSISMGRLRASCPSLK 988


>ref|XP_002279983.2| PREDICTED: F-box/LRR-repeat protein 15-like [Vitis vinifera]
          Length = 922

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 26/48 (54%), Positives = 36/48 (75%)
 Frame = -1

Query: 340  SCSIAEEELEAVVSRCSMLETLDFRYCPKIYPGIMEMLRTVCPNLQCI 197
            SC+I  E +EA +S+C+MLETLD R+CPK+    M+ LR VCP+L+ I
Sbjct: 871  SCNITVEAVEAAISQCNMLETLDIRFCPKLSNASMKTLRAVCPSLKRI 918


>emb|CBI20722.3| unnamed protein product [Vitis vinifera]
          Length = 957

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 26/48 (54%), Positives = 36/48 (75%)
 Frame = -1

Query: 340  SCSIAEEELEAVVSRCSMLETLDFRYCPKIYPGIMEMLRTVCPNLQCI 197
            SC+I  E +EA +S+C+MLETLD R+CPK+    M+ LR VCP+L+ I
Sbjct: 906  SCNITVEAVEAAISQCNMLETLDIRFCPKLSNASMKTLRAVCPSLKRI 953


>ref|XP_003526056.1| PREDICTED: F-box/LRR-repeat protein 15-like [Glycine max]
          Length = 893

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 27/48 (56%), Positives = 36/48 (75%)
 Frame = -1

Query: 340 SCSIAEEELEAVVSRCSMLETLDFRYCPKIYPGIMEMLRTVCPNLQCI 197
           SC+I EE +EA +S+CS+LETLD R+CPKI    M  LRT+C +L+ I
Sbjct: 843 SCNIDEEAVEAAISKCSILETLDVRFCPKISSMSMGRLRTICSSLKRI 890


>ref|XP_002324196.1| predicted protein [Populus trichocarpa] gi|222865630|gb|EEF02761.1|
            predicted protein [Populus trichocarpa]
          Length = 957

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 27/48 (56%), Positives = 34/48 (70%)
 Frame = -1

Query: 340  SCSIAEEELEAVVSRCSMLETLDFRYCPKIYPGIMEMLRTVCPNLQCI 197
            SC+I EE +EA +S+C MLETLD R+CPKI    M  LR  CP+L+ I
Sbjct: 906  SCNIDEETVEAAISQCGMLETLDVRFCPKICSISMGQLRAACPSLKRI 953


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