BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00033801
         (629 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22115.3| unnamed protein product [Vitis vinifera]              345   3e-93
ref|XP_002279656.1| PREDICTED: pentatricopeptide repeat-containi...   345   3e-93
ref|XP_002316152.1| predicted protein [Populus trichocarpa] gi|2...   339   2e-91
ref|XP_002532083.1| pentatricopeptide repeat-containing protein,...   338   4e-91
ref|XP_003555011.1| PREDICTED: pentatricopeptide repeat-containi...   333   1e-89

>emb|CBI22115.3| unnamed protein product [Vitis vinifera]
          Length = 765

 Score =  345 bits (886), Expect = 3e-93
 Identities = 168/206 (81%), Positives = 188/206 (91%)
 Frame = +3

Query: 12  AHSRVIQHLARAEKLEVSFCCFKKIQDSGCKIDTPTYNSLITLFLNKGLPYKAFEIYETM 191
           A ++V++ LA+AEKLEV+FCCFKK+QDSGCKIDT TYNSLITLFLNKGLPYKAFE+YE+M
Sbjct: 164 ACNQVVRDLAKAEKLEVAFCCFKKVQDSGCKIDTATYNSLITLFLNKGLPYKAFEVYESM 223

Query: 192 AEAGCSLDASSYELMIPSLAKSGRLDSAFKLFQEMKEKGFRPNFPIFSSLVDSMGKAGRL 371
             AGC LD S+YELMIPSLAKSGRLD+AFKLFQEMKEK  RP+F +F+SLVDSMGKAGRL
Sbjct: 224 EAAGCLLDGSTYELMIPSLAKSGRLDAAFKLFQEMKEKNLRPSFLVFASLVDSMGKAGRL 283

Query: 372 DMAMKVYMEMQGLGFRPFATMFVSLIESFAKAGKLEMAMRLWDEMKKAGFRPNYGLYTLT 551
           D +MKVYMEMQG G RP ATM+VSLIESF KAGKLE A+R+WDEMKKAGFRPNYGLYT+ 
Sbjct: 284 DTSMKVYMEMQGFGLRPSATMYVSLIESFVKAGKLETALRIWDEMKKAGFRPNYGLYTMV 343

Query: 552 VESHAKSGKLELAMSLFSDMEKAGFL 629
           VESHAKSGKLE AMS+FSDMEKAGFL
Sbjct: 344 VESHAKSGKLETAMSVFSDMEKAGFL 369



 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 56/206 (27%), Positives = 106/206 (51%)
 Frame = +3

Query: 6   FEAHSRVIQHLARAEKLEVSFCCFKKIQDSGCKIDTPTYNSLITLFLNKGLPYKAFEIYE 185
           F   + ++  + +A +L+ S   + ++Q  G +     Y SLI  F+  G    A  I++
Sbjct: 267 FLVFASLVDSMGKAGRLDTSMKVYMEMQGFGLRPSATMYVSLIESFVKAGKLETALRIWD 326

Query: 186 TMAEAGCSLDASSYELMIPSLAKSGRLDSAFKLFQEMKEKGFRPNFPIFSSLVDSMGKAG 365
            M +AG   +   Y +++ S AKSG+L++A  +F +M++ GF P    +S L++    +G
Sbjct: 327 EMKKAGFRPNYGLYTMVVESHAKSGKLETAMSVFSDMEKAGFLPTPSTYSCLLEMHSASG 386

Query: 366 RLDMAMKVYMEMQGLGFRPFATMFVSLIESFAKAGKLEMAMRLWDEMKKAGFRPNYGLYT 545
           ++D AMK+Y  M   G RP  + + +L+   A    +++A ++  EMK  GF  +     
Sbjct: 387 QVDSAMKLYNSMTNAGLRPGLSTYTALLTLLANKKLVDVAAKVLLEMKAMGFSVDVSASD 446

Query: 546 LTVESHAKSGKLELAMSLFSDMEKAG 623
           + +  + K G ++LA+     M  +G
Sbjct: 447 VLM-VYIKDGSVDLALRWLRFMGSSG 471


>ref|XP_002279656.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79490,
           mitochondrial-like [Vitis vinifera]
          Length = 844

 Score =  345 bits (886), Expect = 3e-93
 Identities = 168/206 (81%), Positives = 188/206 (91%)
 Frame = +3

Query: 12  AHSRVIQHLARAEKLEVSFCCFKKIQDSGCKIDTPTYNSLITLFLNKGLPYKAFEIYETM 191
           A ++V++ LA+AEKLEV+FCCFKK+QDSGCKIDT TYNSLITLFLNKGLPYKAFE+YE+M
Sbjct: 251 ACNQVVRDLAKAEKLEVAFCCFKKVQDSGCKIDTATYNSLITLFLNKGLPYKAFEVYESM 310

Query: 192 AEAGCSLDASSYELMIPSLAKSGRLDSAFKLFQEMKEKGFRPNFPIFSSLVDSMGKAGRL 371
             AGC LD S+YELMIPSLAKSGRLD+AFKLFQEMKEK  RP+F +F+SLVDSMGKAGRL
Sbjct: 311 EAAGCLLDGSTYELMIPSLAKSGRLDAAFKLFQEMKEKNLRPSFLVFASLVDSMGKAGRL 370

Query: 372 DMAMKVYMEMQGLGFRPFATMFVSLIESFAKAGKLEMAMRLWDEMKKAGFRPNYGLYTLT 551
           D +MKVYMEMQG G RP ATM+VSLIESF KAGKLE A+R+WDEMKKAGFRPNYGLYT+ 
Sbjct: 371 DTSMKVYMEMQGFGLRPSATMYVSLIESFVKAGKLETALRIWDEMKKAGFRPNYGLYTMV 430

Query: 552 VESHAKSGKLELAMSLFSDMEKAGFL 629
           VESHAKSGKLE AMS+FSDMEKAGFL
Sbjct: 431 VESHAKSGKLETAMSVFSDMEKAGFL 456



 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 56/206 (27%), Positives = 106/206 (51%)
 Frame = +3

Query: 6   FEAHSRVIQHLARAEKLEVSFCCFKKIQDSGCKIDTPTYNSLITLFLNKGLPYKAFEIYE 185
           F   + ++  + +A +L+ S   + ++Q  G +     Y SLI  F+  G    A  I++
Sbjct: 354 FLVFASLVDSMGKAGRLDTSMKVYMEMQGFGLRPSATMYVSLIESFVKAGKLETALRIWD 413

Query: 186 TMAEAGCSLDASSYELMIPSLAKSGRLDSAFKLFQEMKEKGFRPNFPIFSSLVDSMGKAG 365
            M +AG   +   Y +++ S AKSG+L++A  +F +M++ GF P    +S L++    +G
Sbjct: 414 EMKKAGFRPNYGLYTMVVESHAKSGKLETAMSVFSDMEKAGFLPTPSTYSCLLEMHSASG 473

Query: 366 RLDMAMKVYMEMQGLGFRPFATMFVSLIESFAKAGKLEMAMRLWDEMKKAGFRPNYGLYT 545
           ++D AMK+Y  M   G RP  + + +L+   A    +++A ++  EMK  GF  +     
Sbjct: 474 QVDSAMKLYNSMTNAGLRPGLSTYTALLTLLANKKLVDVAAKVLLEMKAMGFSVDVSASD 533

Query: 546 LTVESHAKSGKLELAMSLFSDMEKAG 623
           + +  + K G ++LA+     M  +G
Sbjct: 534 VLM-VYIKDGSVDLALRWLRFMGSSG 558


>ref|XP_002316152.1| predicted protein [Populus trichocarpa] gi|222865192|gb|EEF02323.1|
           predicted protein [Populus trichocarpa]
          Length = 785

 Score =  339 bits (870), Expect = 2e-91
 Identities = 165/208 (79%), Positives = 188/208 (90%)
 Frame = +3

Query: 6   FEAHSRVIQHLARAEKLEVSFCCFKKIQDSGCKIDTPTYNSLITLFLNKGLPYKAFEIYE 185
           F A++RV+++LA+AEKLEVSFCCFKK+QDSGCKIDT TYN L+ LFLNKGLPYKAFEIYE
Sbjct: 192 FSAYNRVLKYLAKAEKLEVSFCCFKKVQDSGCKIDTETYNILMKLFLNKGLPYKAFEIYE 251

Query: 186 TMAEAGCSLDASSYELMIPSLAKSGRLDSAFKLFQEMKEKGFRPNFPIFSSLVDSMGKAG 365
           TM  A CSLD S+YELMIPSLAKSGRLD+AFKLFQEMKE+ FRP+  IFSSLVDSMGKAG
Sbjct: 252 TMEAAHCSLDVSTYELMIPSLAKSGRLDAAFKLFQEMKERNFRPSLGIFSSLVDSMGKAG 311

Query: 366 RLDMAMKVYMEMQGLGFRPFATMFVSLIESFAKAGKLEMAMRLWDEMKKAGFRPNYGLYT 545
           RL+ +MKVYMEMQGLG RP A M+VSLIES+ KAGKL+ A+RLWDEMK AGFRPN+GLYT
Sbjct: 312 RLETSMKVYMEMQGLGLRPSAIMYVSLIESYTKAGKLDAALRLWDEMKIAGFRPNFGLYT 371

Query: 546 LTVESHAKSGKLELAMSLFSDMEKAGFL 629
           L +ESHAKSGKL++AMS+F DMEKAGFL
Sbjct: 372 LIIESHAKSGKLDIAMSIFRDMEKAGFL 399



 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 58/202 (28%), Positives = 104/202 (51%)
 Frame = +3

Query: 18  SRVIQHLARAEKLEVSFCCFKKIQDSGCKIDTPTYNSLITLFLNKGLPYKAFEIYETMAE 197
           S ++  + +A +LE S   + ++Q  G +     Y SLI  +   G    A  +++ M  
Sbjct: 301 SSLVDSMGKAGRLETSMKVYMEMQGLGLRPSAIMYVSLIESYTKAGKLDAALRLWDEMKI 360

Query: 198 AGCSLDASSYELMIPSLAKSGRLDSAFKLFQEMKEKGFRPNFPIFSSLVDSMGKAGRLDM 377
           AG   +   Y L+I S AKSG+LD A  +F++M++ GF P    +SSL++    +G++D 
Sbjct: 361 AGFRPNFGLYTLIIESHAKSGKLDIAMSIFRDMEKAGFLPTPSTYSSLLEMHAASGQVDA 420

Query: 378 AMKVYMEMQGLGFRPFATMFVSLIESFAKAGKLEMAMRLWDEMKKAGFRPNYGLYTLTVE 557
           AMK+Y  M   G RP  + + +L+   A    +++A ++  EMK  GF  +     + + 
Sbjct: 421 AMKLYNSMTNAGLRPGLSTYTALLTLLAHKKLVDVAAKILLEMKAMGFSVDVSASDVLM- 479

Query: 558 SHAKSGKLELAMSLFSDMEKAG 623
            + K G ++L++     M  +G
Sbjct: 480 VYIKDGSVDLSLRWLRFMSSSG 501



 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 47/180 (26%), Positives = 84/180 (46%)
 Frame = +3

Query: 6   FEAHSRVIQHLARAEKLEVSFCCFKKIQDSGCKIDTPTYNSLITLFLNKGLPYKAFEIYE 185
           F  ++ +I+  A++ KL+++   F+ ++ +G      TY+SL+ +    G    A ++Y 
Sbjct: 367 FGLYTLIIESHAKSGKLDIAMSIFRDMEKAGFLPTPSTYSSLLEMHAASGQVDAAMKLYN 426

Query: 186 TMAEAGCSLDASSYELMIPSLAKSGRLDSAFKLFQEMKEKGFRPNFPIFSSLVDSMGKAG 365
           +M  AG     S+Y  ++  LA    +D A K+  EMK  GF  +      L+  + K G
Sbjct: 427 SMTNAGLRPGLSTYTALLTLLAHKKLVDVAAKILLEMKAMGFSVDVSASDVLMVYI-KDG 485

Query: 366 RLDMAMKVYMEMQGLGFRPFATMFVSLIESFAKAGKLEMAMRLWDEMKKAGFRPNYGLYT 545
            +D++++    M   G R    +   L ES  K G  E A  L +    +  + +  LYT
Sbjct: 486 SVDLSLRWLRFMSSSGIRTNNFIIRQLFESCMKNGLYESAKPLLETYVNSAAKVDLILYT 545


>ref|XP_002532083.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223528243|gb|EEF30297.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 841

 Score =  338 bits (868), Expect = 4e-91
 Identities = 164/206 (79%), Positives = 187/206 (90%)
 Frame = +3

Query: 12  AHSRVIQHLARAEKLEVSFCCFKKIQDSGCKIDTPTYNSLITLFLNKGLPYKAFEIYETM 191
           A++RVIQHLA+AEKLE+SFCCFKK+QDSGCKIDT TYN+LIT FLNKGLPYKAFEIYE+M
Sbjct: 255 AYNRVIQHLAKAEKLELSFCCFKKVQDSGCKIDTQTYNALITSFLNKGLPYKAFEIYESM 314

Query: 192 AEAGCSLDASSYELMIPSLAKSGRLDSAFKLFQEMKEKGFRPNFPIFSSLVDSMGKAGRL 371
             A CSLDAS+YELMIPSLAKSGRLD AFKLFQEMKE+  RP+F IFSSLVDSMGK+GRL
Sbjct: 315 QAAQCSLDASTYELMIPSLAKSGRLDVAFKLFQEMKERKIRPSFGIFSSLVDSMGKSGRL 374

Query: 372 DMAMKVYMEMQGLGFRPFATMFVSLIESFAKAGKLEMAMRLWDEMKKAGFRPNYGLYTLT 551
           D +MK+YMEMQG G R  A+M+VSLIES+ KAGKL+ A+RLWDEMKKAGFRPNYGLYTL 
Sbjct: 375 DTSMKIYMEMQGFGLRSSASMYVSLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLI 434

Query: 552 VESHAKSGKLELAMSLFSDMEKAGFL 629
           +ESHAKSGKL++A S+F DM+KAGFL
Sbjct: 435 IESHAKSGKLDIATSIFKDMDKAGFL 460



 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 57/206 (27%), Positives = 105/206 (50%)
 Frame = +3

Query: 6   FEAHSRVIQHLARAEKLEVSFCCFKKIQDSGCKIDTPTYNSLITLFLNKGLPYKAFEIYE 185
           F   S ++  + ++ +L+ S   + ++Q  G +     Y SLI  +   G    A  +++
Sbjct: 358 FGIFSSLVDSMGKSGRLDTSMKIYMEMQGFGLRSSASMYVSLIESYTKAGKLDTALRLWD 417

Query: 186 TMAEAGCSLDASSYELMIPSLAKSGRLDSAFKLFQEMKEKGFRPNFPIFSSLVDSMGKAG 365
            M +AG   +   Y L+I S AKSG+LD A  +F++M + GF P    +S L++    +G
Sbjct: 418 EMKKAGFRPNYGLYTLIIESHAKSGKLDIATSIFKDMDKAGFLPTPSTYSCLLEMHAASG 477

Query: 366 RLDMAMKVYMEMQGLGFRPFATMFVSLIESFAKAGKLEMAMRLWDEMKKAGFRPNYGLYT 545
           ++D AMK+Y  M   G +P  + + +L+   A    +++A ++  EMK  GF  +     
Sbjct: 478 QVDSAMKLYNSMTNAGLKPGLSTYTALLTLLASKKLVDVAAKILLEMKAMGFSVDVSASD 537

Query: 546 LTVESHAKSGKLELAMSLFSDMEKAG 623
           + +  + K G ++LA+   S M  +G
Sbjct: 538 VLM-VYIKDGSVDLALRWLSFMGSSG 562



 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 37/139 (26%), Positives = 68/139 (48%), Gaps = 3/139 (2%)
 Frame = +3

Query: 210 LDASSYELMIPSLAKSGRLDSAFKLFQEMKE---KGFRPNFPIFSSLVDSMGKAGRLDMA 380
           +D   Y L+   L K    D    LF EM +   KG   +   ++ ++  + KA +L+++
Sbjct: 213 VDDECYALLFDGLNKIRDFDGIQSLFDEMVQDSSKGGISSVYAYNRVIQHLAKAEKLELS 272

Query: 381 MKVYMEMQGLGFRPFATMFVSLIESFAKAGKLEMAMRLWDEMKKAGFRPNYGLYTLTVES 560
              + ++Q  G +     + +LI SF   G    A  +++ M+ A    +   Y L + S
Sbjct: 273 FCCFKKVQDSGCKIDTQTYNALITSFLNKGLPYKAFEIYESMQAAQCSLDASTYELMIPS 332

Query: 561 HAKSGKLELAMSLFSDMEK 617
            AKSG+L++A  LF +M++
Sbjct: 333 LAKSGRLDVAFKLFQEMKE 351


>ref|XP_003555011.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79490,
           mitochondrial-like [Glycine max]
          Length = 752

 Score =  333 bits (855), Expect = 1e-89
 Identities = 161/209 (77%), Positives = 189/209 (90%)
 Frame = +3

Query: 3   LFEAHSRVIQHLARAEKLEVSFCCFKKIQDSGCKIDTPTYNSLITLFLNKGLPYKAFEIY 182
           LF A +RVI++LA+AEKLEVSFCCFKKI ++GCK+DT TYNSLITLFLNKGLPYKAFE+Y
Sbjct: 158 LFAACNRVIRYLAKAEKLEVSFCCFKKILNAGCKVDTETYNSLITLFLNKGLPYKAFEMY 217

Query: 183 ETMAEAGCSLDASSYELMIPSLAKSGRLDSAFKLFQEMKEKGFRPNFPIFSSLVDSMGKA 362
           E+M +AGCSLD S+YELMIP+LAKSGRLD+AFKLFQEMK +GFRP   +F+SLVDSMGKA
Sbjct: 218 ESMEKAGCSLDGSTYELMIPNLAKSGRLDAAFKLFQEMKVRGFRPGLNVFASLVDSMGKA 277

Query: 363 GRLDMAMKVYMEMQGLGFRPFATMFVSLIESFAKAGKLEMAMRLWDEMKKAGFRPNYGLY 542
           GRLD AMKVYMEM+G G++P  T++VSLIES+ K+GKLE A+RLWDEM+ AGFRPN+GLY
Sbjct: 278 GRLDSAMKVYMEMRGYGYKPPPTIYVSLIESYVKSGKLETALRLWDEMRMAGFRPNFGLY 337

Query: 543 TLTVESHAKSGKLELAMSLFSDMEKAGFL 629
           TL +ESHAKSGKLE+AMS F DMEKAGFL
Sbjct: 338 TLIIESHAKSGKLEIAMSTFLDMEKAGFL 366



 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 47/180 (26%), Positives = 83/180 (46%)
 Frame = +3

Query: 6   FEAHSRVIQHLARAEKLEVSFCCFKKIQDSGCKIDTPTYNSLITLFLNKGLPYKAFEIYE 185
           F  ++ +I+  A++ KLE++   F  ++ +G      TY  L+ +    G    A ++Y 
Sbjct: 334 FGLYTLIIESHAKSGKLEIAMSTFLDMEKAGFLPTPSTYACLLEMHAASGQIDPAMKLYN 393

Query: 186 TMAEAGCSLDASSYELMIPSLAKSGRLDSAFKLFQEMKEKGFRPNFPIFSSLVDSMGKAG 365
           +M  AG     S+Y +++  LA    +D A K+  EMK  G+  +    S ++    K G
Sbjct: 394 SMTNAGLRPGLSTYTVLLTLLANKKLVDVAAKILLEMKAMGYSVDVTA-SDILMVYIKEG 452

Query: 366 RLDMAMKVYMEMQGLGFRPFATMFVSLIESFAKAGKLEMAMRLWDEMKKAGFRPNYGLYT 545
            +D+A++    M   G R    +   L ES  K+G  E A  L +    +  + +  LYT
Sbjct: 453 SVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKSGLFESAKPLLETYVNSAAKVDLILYT 512