BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00033797
         (409 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera]   134   8e-30
emb|CCH50966.1| T4.5 [Malus x robusta]                                133   2e-29
gb|AAC67200.1| putative retroelement pol polyprotein [Arabidopsi...   133   2e-29
gb|AAD21687.1| Strong similarity to gi|3600044 T12H20.12 proteas...   132   3e-29
gb|AAC61290.1| putative retroelement pol polyprotein [Arabidopsi...   131   5e-29

>emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera]
          Length = 1449

 Score =  134 bits (337), Expect = 8e-30
 Identities = 60/135 (44%), Positives = 87/135 (64%)
 Frame = +2

Query: 2   TIWHQRLGHPSASVFTKVVRHSNIPMLSSSANKSSFCSDCQFGKSKRLPFTHCTSKTIAP 181
           T+WH RLGHP+ ++   ++   NI   S   +K++ C  CQF KS +LPF    S+   P
Sbjct: 520 TLWHSRLGHPADNILKHILTSCNI---SHQCHKNNVCCACQFAKSHKLPFNVXVSRASHP 576

Query: 182 LQILYLDLWGPSSVTSISGFRYYLSIVDDFSRYCWIYPLFSKSDTCTVFVSFQKKIENLL 361
           L +L+ DLWGP S+ S +G RY++  VDDFSR+ WIYPL SK    +VF+ F+  +EN  
Sbjct: 577 LALLHADLWGPXSIPSTTGARYFILFVDDFSRFSWIYPLHSKDQALSVFIKFKSLVENQF 636

Query: 362 STTIKTVRTDAGGEF 406
           ++ I+ +R+D GGEF
Sbjct: 637 NSRIQCLRSDNGGEF 651


>emb|CCH50966.1| T4.5 [Malus x robusta]
          Length = 1670

 Score =  133 bits (334), Expect = 2e-29
 Identities = 59/134 (44%), Positives = 89/134 (66%)
 Frame = +2

Query: 8    WHQRLGHPSASVFTKVVRHSNIPMLSSSANKSSFCSDCQFGKSKRLPFTHCTSKTIAPLQ 187
            WH+RLGHPS      VV  +++P++    N  S C+ CQ GKS RL F+     +  PLQ
Sbjct: 732  WHRRLGHPSGGTLHSVVHKNHLPVIGY-VNNMSVCTACQLGKSYRLSFSTLPCTSSRPLQ 790

Query: 188  ILYLDLWGPSSVTSISGFRYYLSIVDDFSRYCWIYPLFSKSDTCTVFVSFQKKIENLLST 367
            +L+ D+WGPS  +S +G+R+YL IVDDF++Y W+YPL  KSD  +   +F  K++ LL  
Sbjct: 791  LLHTDVWGPSPTSSCTGYRFYLIIVDDFTKYSWLYPLHFKSDVFSTLKTFILKLQTLLDL 850

Query: 368  TIKTVRTDAGGEFV 409
             ++++R+D+GGEF+
Sbjct: 851  QVQSIRSDSGGEFL 864


>gb|AAC67200.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1402

 Score =  133 bits (334), Expect = 2e-29
 Identities = 62/135 (45%), Positives = 86/135 (63%)
 Frame = +2

Query: 5   IWHQRLGHPSASVFTKVVRHSNIPMLSSSANKSSFCSDCQFGKSKRLPFTHCTSKTIAPL 184
           +WH+RLGHP   V  ++V+ ++I +  +S    S C  CQ GKS RLPF   +  +  PL
Sbjct: 466 VWHRRLGHPHPQVLQQLVKTNSISINKTS---KSLCEACQLGKSTRLPFVSSSFTSNRPL 522

Query: 185 QILYLDLWGPSSVTSISGFRYYLSIVDDFSRYCWIYPLFSKSDTCTVFVSFQKKIENLLS 364
           + ++ DLWGPS +TS+ GFRYY   +D +SR+ WIYPL  KSD   +FV+F K +EN L+
Sbjct: 523 ERVHCDLWGPSPITSVQGFRYYAVFIDHYSRFSWIYPLKLKSDFYNIFVAFHKLVENQLN 582

Query: 365 TTIKTVRTDAGGEFV 409
             I   + D GGEFV
Sbjct: 583 HKISVFQCDGGGEFV 597


>gb|AAD21687.1| Strong similarity to gi|3600044 T12H20.12 protease homolog from
           Arabidopsis thaliana BAC gb|AF080119 and is a member of
           the reverse transcriptase family PF|00078 [Arabidopsis
           thaliana]
          Length = 1415

 Score =  132 bits (332), Expect = 3e-29
 Identities = 62/135 (45%), Positives = 83/135 (61%)
 Frame = +2

Query: 5   IWHQRLGHPSASVFTKVVRHSNIPMLSSSANKSSFCSDCQFGKSKRLPFTHCTSKTIAPL 184
           +WH RLGH ++     +     I +  + +  S  C  CQ GKS RLPF    S+ + PL
Sbjct: 455 VWHHRLGHANSKALQHLQNSKAIQI--NKSRTSPVCEPCQMGKSSRLPFLISDSRVLHPL 512

Query: 185 QILYLDLWGPSSVTSISGFRYYLSIVDDFSRYCWIYPLFSKSDTCTVFVSFQKKIENLLS 364
             ++ DLWGPS V S  G +YY   VDD+SRY W YPL +KS+  +VF+SFQK +EN L+
Sbjct: 513 DRIHCDLWGPSPVVSNQGLKYYAIFVDDYSRYSWFYPLHNKSEFLSVFISFQKLVENQLN 572

Query: 365 TTIKTVRTDAGGEFV 409
           T IK  ++D GGEFV
Sbjct: 573 TKIKVFQSDGGGEFV 587


>gb|AAC61290.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1149

 Score =  131 bits (330), Expect = 5e-29
 Identities = 61/134 (45%), Positives = 83/134 (61%)
 Frame = +2

Query: 5   IWHQRLGHPSASVFTKVVRHSNIPMLSSSANKSSFCSDCQFGKSKRLPFTHCTSKTIAPL 184
           +WH RLGHP+  V   +     I +  S+   S  C  C+ GKS RLPF         PL
Sbjct: 448 VWHMRLGHPNPQVLQLLANKKAIQINKST---SKMCESCRLGKSSRLPFIASDFIASRPL 504

Query: 185 QILYLDLWGPSSVTSISGFRYYLSIVDDFSRYCWIYPLFSKSDTCTVFVSFQKKIENLLS 364
           + ++ DLWGP+ V+SI GF+YY+  +D+ SR+CW YPL  KSD C++F+ FQ  +ENLL 
Sbjct: 505 ERVHCDLWGPAPVSSIQGFQYYVIFIDNRSRFCWFYPLKHKSDFCSLFMKFQSFVENLLQ 564

Query: 365 TTIKTVRTDAGGEF 406
           T I T ++D GGEF
Sbjct: 565 TKIGTFQSDGGGEF 578