BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00033790
         (270 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263650.1| PREDICTED: pentatricopeptide repeat-containi...   117   7e-25
ref|XP_002322407.1| predicted protein [Populus trichocarpa] gi|2...   116   2e-24
ref|XP_002510931.1| pentatricopeptide repeat-containing protein,...   110   2e-22
ref|XP_003533519.1| PREDICTED: pentatricopeptide repeat-containi...   109   2e-22
gb|ACU21163.1| unknown [Glycine max]                                  109   2e-22

>ref|XP_002263650.1| PREDICTED: pentatricopeptide repeat-containing protein At4g25270,
           chloroplastic [Vitis vinifera]
           gi|296084180|emb|CBI24568.3| unnamed protein product
           [Vitis vinifera]
          Length = 516

 Score =  117 bits (294), Expect = 7e-25
 Identities = 56/89 (62%), Positives = 70/89 (78%)
 Frame = +1

Query: 1   SLIHLYSEQGKLDRARWLFENLVERDLISWNSIISGHRKHLQALAYFQKMENSIFRPDSV 180
           SLI LYS  GKLD+A WLF+++ ERD++SWNSIIS HRK L+A+ YF +M+ +   PD V
Sbjct: 320 SLIVLYSNHGKLDQACWLFDHMPERDVVSWNSIISAHRKDLKAITYFSRMQKADVLPDVV 379

Query: 181 TFVSLLSACAHLGLVEDGRQLFLKMKKKY 267
           TFVSLLSACAHLGLV+DG  LF  M++ Y
Sbjct: 380 TFVSLLSACAHLGLVKDGEGLFSMMREDY 408



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 27/77 (35%), Positives = 51/77 (66%), Gaps = 3/77 (3%)
 Frame = +1

Query: 1   SLIHLYSEQGKLDRARWLFENLVERDLISWNSIISGHRKH---LQALAYFQKMENSIFRP 171
           +L+ +Y++ G + +AR +F+ +V RD +SWNS+++G+ +H   LQAL+ F++M    F P
Sbjct: 222 ALVDMYAKCGDIVKARKVFDKIVCRDSVSWNSMLTGYIRHGLPLQALSIFRRMLQYGFEP 281

Query: 172 DSVTFVSLLSACAHLGL 222
           D+V   ++++    L L
Sbjct: 282 DAVAISTVVTGVPSLKL 298


>ref|XP_002322407.1| predicted protein [Populus trichocarpa] gi|222869403|gb|EEF06534.1|
           predicted protein [Populus trichocarpa]
          Length = 442

 Score =  116 bits (290), Expect = 2e-24
 Identities = 56/89 (62%), Positives = 69/89 (77%)
 Frame = +1

Query: 1   SLIHLYSEQGKLDRARWLFENLVERDLISWNSIISGHRKHLQALAYFQKMENSIFRPDSV 180
           SLI +YS   KLDRARWLF+++ ++D++SWNSIIS H K L+AL YF+ ME     PD +
Sbjct: 250 SLIAVYSNGRKLDRARWLFDHMPKKDIVSWNSIISAHCKDLKALTYFELMERDGALPDKI 309

Query: 181 TFVSLLSACAHLGLVEDGRQLFLKMKKKY 267
           TFVSLLSACAHLGLV+DG +LF  MK KY
Sbjct: 310 TFVSLLSACAHLGLVKDGERLFSLMKAKY 338


>ref|XP_002510931.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550046|gb|EEF51533.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 461

 Score =  110 bits (274), Expect = 2e-22
 Identities = 53/88 (60%), Positives = 66/88 (75%)
 Frame = +1

Query: 1   SLIHLYSEQGKLDRARWLFENLVERDLISWNSIISGHRKHLQALAYFQKMENSIFRPDSV 180
           SLI +YS  GKL + RWLF+N+ ERD++SWNSIIS H K  Q LAYF++MENS   PD++
Sbjct: 334 SLIVMYSSNGKLVQTRWLFDNMQERDVVSWNSIISAHCKDPQVLAYFERMENSGAFPDNI 393

Query: 181 TFVSLLSACAHLGLVEDGRQLFLKMKKK 264
           TFVS LSACAHLGLV DG    +K+  +
Sbjct: 394 TFVSALSACAHLGLVRDGESWKVKISSQ 421



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
 Frame = +1

Query: 4   LIHLYSEQGKLDRARWLFENLVERD--LISWNSIISGHRK---HLQALAYFQKMENSIFR 168
           L+ LY+  G +D A  +F+ +  RD    +WNS+I+G+ +   +  A+A + +M+     
Sbjct: 134 LLRLYASCGYMDEAHQMFDEMSNRDESAFAWNSLIAGYSELGLYEDAIALYFQMDEEYVE 193

Query: 169 PDSVTFVSLLSACAHLGLVEDG 234
           PD  TF  +L AC  LGL++ G
Sbjct: 194 PDEFTFPRVLKACGGLGLIQVG 215


>ref|XP_003533519.1| PREDICTED: pentatricopeptide repeat-containing protein At4g25270,
           chloroplastic-like [Glycine max]
          Length = 526

 Score =  109 bits (273), Expect = 2e-22
 Identities = 50/89 (56%), Positives = 70/89 (78%)
 Frame = +1

Query: 1   SLIHLYSEQGKLDRARWLFENLVERDLISWNSIISGHRKHLQALAYFQKMENSIFRPDSV 180
           SLI +YS  G+L++ARW+F  + ERD++SWNSIIS H K  +ALA+F++ME +  +PD +
Sbjct: 331 SLIMMYSNHGRLEKARWVFNLMPERDVVSWNSIISAHCKRREALAFFEQMEGAGVQPDKI 390

Query: 181 TFVSLLSACAHLGLVEDGRQLFLKMKKKY 267
           TFVS+LSACA+LGL++DG +LF  M  KY
Sbjct: 391 TFVSILSACAYLGLLKDGERLFALMCGKY 419


>gb|ACU21163.1| unknown [Glycine max]
          Length = 481

 Score =  109 bits (273), Expect = 2e-22
 Identities = 50/89 (56%), Positives = 70/89 (78%)
 Frame = +1

Query: 1   SLIHLYSEQGKLDRARWLFENLVERDLISWNSIISGHRKHLQALAYFQKMENSIFRPDSV 180
           SLI +YS  G+L++ARW+F  + ERD++SWNSIIS H K  +ALA+F++ME +  +PD +
Sbjct: 331 SLIMMYSNHGRLEKARWVFNLMPERDVVSWNSIISAHCKRREALAFFEQMEGAGVQPDKI 390

Query: 181 TFVSLLSACAHLGLVEDGRQLFLKMKKKY 267
           TFVS+LSACA+LGL++DG +LF  M  KY
Sbjct: 391 TFVSILSACAYLGLLKDGERLFALMCGKY 419