BLASTX nr result

ID: Cimicifuga21_contig00033773 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00033773
         (462 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316664.1| f-box family protein [Populus trichocarpa] g...    79   7e-26
ref|XP_002305651.1| f-box family protein [Populus trichocarpa] g...    79   7e-26
ref|XP_002524686.1| TRANSPORT INHIBITOR RESPONSE 1 protein, puta...    78   4e-25
emb|CAN66468.1| hypothetical protein VITISV_016565 [Vitis vinifera]    78   2e-24
ref|XP_002271412.2| PREDICTED: protein TRANSPORT INHIBITOR RESPO...    78   4e-24

>ref|XP_002316664.1| f-box family protein [Populus trichocarpa]
           gi|222859729|gb|EEE97276.1| f-box family protein
           [Populus trichocarpa]
          Length = 579

 Score = 79.0 bits (193), Expect(2) = 7e-26
 Identities = 39/50 (78%), Positives = 43/50 (86%)
 Frame = -1

Query: 150 PILLTNEHMDEAFGAIVKTCTKLQRLAASGLLDDLTF*YIRRYAKNLETL 1
           P  LTNE MDEAFGA+V+TCTKLQRL+ SGLL DLTF YI +YAKNLETL
Sbjct: 417 PDYLTNEPMDEAFGAVVRTCTKLQRLSVSGLLTDLTFEYIGQYAKNLETL 466



 Score = 63.2 bits (152), Expect(2) = 7e-26
 Identities = 30/43 (69%), Positives = 35/43 (81%)
 Frame = -2

Query: 269 LLETIHVFPEDPFDQDVLGGGVTKAGFAAVSRGCRNLHYVLYF 141
           LLE + VFP DPFD++V+ G VT+AGF AVS GCR LHYVLYF
Sbjct: 344 LLEELRVFPADPFDEEVIHG-VTEAGFLAVSYGCRRLHYVLYF 385


>ref|XP_002305651.1| f-box family protein [Populus trichocarpa]
           gi|222848615|gb|EEE86162.1| f-box family protein
           [Populus trichocarpa]
          Length = 579

 Score = 79.0 bits (193), Expect(2) = 7e-26
 Identities = 39/50 (78%), Positives = 43/50 (86%)
 Frame = -1

Query: 150 PILLTNEHMDEAFGAIVKTCTKLQRLAASGLLDDLTF*YIRRYAKNLETL 1
           P  LTNE MDEAFGA+V+TCTKLQRL+ SGLL DLTF YI +YAKNLETL
Sbjct: 417 PDYLTNEPMDEAFGAVVRTCTKLQRLSVSGLLTDLTFEYIGQYAKNLETL 466



 Score = 63.2 bits (152), Expect(2) = 7e-26
 Identities = 29/43 (67%), Positives = 35/43 (81%)
 Frame = -2

Query: 269 LLETIHVFPEDPFDQDVLGGGVTKAGFAAVSRGCRNLHYVLYF 141
           LLE + VFP DPFD++++ G VT+AGF AVS GCR LHYVLYF
Sbjct: 344 LLEELRVFPADPFDEEIIHG-VTEAGFVAVSYGCRRLHYVLYF 385


>ref|XP_002524686.1| TRANSPORT INHIBITOR RESPONSE 1 protein, putative [Ricinus communis]
           gi|223536047|gb|EEF37705.1| TRANSPORT INHIBITOR RESPONSE
           1 protein, putative [Ricinus communis]
          Length = 589

 Score = 78.2 bits (191), Expect(2) = 4e-25
 Identities = 39/50 (78%), Positives = 42/50 (84%)
 Frame = -1

Query: 150 PILLTNEHMDEAFGAIVKTCTKLQRLAASGLLDDLTF*YIRRYAKNLETL 1
           P   TN+ MDEAFGA+VKTCTKLQRL+ SGLL DLTF YI RYAKNLETL
Sbjct: 427 PDYTTNKPMDEAFGAVVKTCTKLQRLSVSGLLTDLTFEYIGRYAKNLETL 476



 Score = 61.6 bits (148), Expect(2) = 4e-25
 Identities = 28/43 (65%), Positives = 35/43 (81%)
 Frame = -2

Query: 269 LLETIHVFPEDPFDQDVLGGGVTKAGFAAVSRGCRNLHYVLYF 141
           LLE + VFP DPF+++++ G VT+AGF AVS GCR LHYVLYF
Sbjct: 354 LLEELRVFPADPFEEEIIHG-VTEAGFVAVSYGCRRLHYVLYF 395


>emb|CAN66468.1| hypothetical protein VITISV_016565 [Vitis vinifera]
          Length = 620

 Score = 77.8 bits (190), Expect(2) = 2e-24
 Identities = 39/50 (78%), Positives = 42/50 (84%)
 Frame = -1

Query: 150 PILLTNEHMDEAFGAIVKTCTKLQRLAASGLLDDLTF*YIRRYAKNLETL 1
           P  LT+E MDEAFGA+VK CTKLQRLA SGLL DLTF YI +YAKNLETL
Sbjct: 461 PDYLTDEPMDEAFGAVVKNCTKLQRLAVSGLLTDLTFEYIGKYAKNLETL 510



 Score = 59.3 bits (142), Expect(2) = 2e-24
 Identities = 38/100 (38%), Positives = 53/100 (53%), Gaps = 5/100 (5%)
 Frame = -2

Query: 425 LFALLLLHTQP*NHLLQLTLQPVQRSHQ-----TLFHDCLAISKGSMLNISIVVVGVLLE 261
           L+ +LL+   P    L L + P   S       +LF+  +        +    ++  LLE
Sbjct: 331 LWVILLISVVPVMLNLSLGIMPXSDSMDNSMCFSLFNXLVPTPISQHSSSPSRIICPLLE 390

Query: 260 TIHVFPEDPFDQDVLGGGVTKAGFAAVSRGCRNLHYVLYF 141
            + VFP DP++QDV+ G VT+ GF AVS GC  LHYVLYF
Sbjct: 391 ELRVFPADPYEQDVVHG-VTEMGFVAVSYGCPRLHYVLYF 429


>ref|XP_002271412.2| PREDICTED: protein TRANSPORT INHIBITOR RESPONSE 1 [Vitis vinifera]
          Length = 583

 Score = 77.8 bits (190), Expect(2) = 4e-24
 Identities = 39/50 (78%), Positives = 42/50 (84%)
 Frame = -1

Query: 150 PILLTNEHMDEAFGAIVKTCTKLQRLAASGLLDDLTF*YIRRYAKNLETL 1
           P  LT+E MDEAFGA+VK CTKLQRLA SGLL DLTF YI +YAKNLETL
Sbjct: 424 PDYLTDEPMDEAFGAVVKNCTKLQRLAVSGLLTDLTFEYIGKYAKNLETL 473



 Score = 58.5 bits (140), Expect(2) = 4e-24
 Identities = 28/43 (65%), Positives = 33/43 (76%)
 Frame = -2

Query: 269 LLETIHVFPEDPFDQDVLGGGVTKAGFAAVSRGCRNLHYVLYF 141
           LLE + VFP DP++QDV+ G VT+ GF AVS GC  LHYVLYF
Sbjct: 351 LLEELRVFPADPYEQDVVHG-VTEMGFVAVSYGCPRLHYVLYF 392


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