BLASTX nr result

ID: Cimicifuga21_contig00033766 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00033766
         (315 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303834.1| predicted protein [Populus trichocarpa] gi|2...   128   4e-28
ref|XP_002299269.1| predicted protein [Populus trichocarpa] gi|2...    89   4e-16
ref|XP_002527324.1| conserved hypothetical protein [Ricinus comm...    86   2e-15
ref|XP_002438596.1| hypothetical protein SORBIDRAFT_10g022510 [S...    79   5e-13
gb|AFW86988.1| hypothetical protein ZEAMMB73_889354 [Zea mays]         76   2e-12

>ref|XP_002303834.1| predicted protein [Populus trichocarpa] gi|222841266|gb|EEE78813.1|
           predicted protein [Populus trichocarpa]
          Length = 210

 Score =  128 bits (322), Expect = 4e-28
 Identities = 57/74 (77%), Positives = 66/74 (89%)
 Frame = -2

Query: 224 MALSTWLCTHNTKKMLVKIVHPGGHVELHDRPLLAAEIMLRNPRCCVAHPHVFKQPWAIV 45
           M + + +CT++TK MLVKIVHPGGHVELHDRP+LA E+MLRNPRC VA+PHVF+QPWAIV
Sbjct: 1   MVIPSCICTNSTKNMLVKIVHPGGHVELHDRPVLAEEVMLRNPRCIVAYPHVFRQPWAIV 60

Query: 44  PPDTMLRLGQKFYV 3
            PDTML LGQKFYV
Sbjct: 61  APDTMLLLGQKFYV 74


>ref|XP_002299269.1| predicted protein [Populus trichocarpa] gi|222846527|gb|EEE84074.1|
           predicted protein [Populus trichocarpa]
          Length = 189

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 39/59 (66%), Positives = 49/59 (83%)
 Frame = -2

Query: 224 MALSTWLCTHNTKKMLVKIVHPGGHVELHDRPLLAAEIMLRNPRCCVAHPHVFKQPWAI 48
           M +S+ + T +TK M  KIVHPGGH+ELHD+P+LAAE+ML NPRC VA+PHVF+Q WAI
Sbjct: 1   MVISSSIPTKSTKNMPFKIVHPGGHIELHDKPVLAAEVMLCNPRCIVAYPHVFQQTWAI 59


>ref|XP_002527324.1| conserved hypothetical protein [Ricinus communis]
           gi|223533324|gb|EEF35076.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 157

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 37/51 (72%), Positives = 46/51 (90%)
 Frame = -2

Query: 155 GHVELHDRPLLAAEIMLRNPRCCVAHPHVFKQPWAIVPPDTMLRLGQKFYV 3
           GH ELHDRP++A+EI+ RNP+C VA+P+VF+QPWAIV PDT+L LGQKFYV
Sbjct: 4   GHKELHDRPVVASEIIRRNPKCVVAYPNVFQQPWAIVAPDTILMLGQKFYV 54


>ref|XP_002438596.1| hypothetical protein SORBIDRAFT_10g022510 [Sorghum bicolor]
           gi|241916819|gb|EER89963.1| hypothetical protein
           SORBIDRAFT_10g022510 [Sorghum bicolor]
          Length = 210

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 39/76 (51%), Positives = 53/76 (69%), Gaps = 4/76 (5%)
 Frame = -2

Query: 218 LSTWLCTHNTK---KMLVKIVHPGGHVELHDRPLLAAEIMLRNPRCCVAHPHVFKQP-WA 51
           ++TW    + K   +  VK+V PGGHVEL D P LAA++M R+PR CVA P VF++P  A
Sbjct: 1   MTTWFSCSSRKAARRQHVKLVFPGGHVELLDCPTLAADVMARHPRFCVARPDVFREPAGA 60

Query: 50  IVPPDTMLRLGQKFYV 3
           +  PD +L+LGQK+YV
Sbjct: 61  VAAPDAVLQLGQKYYV 76


>gb|AFW86988.1| hypothetical protein ZEAMMB73_889354 [Zea mays]
          Length = 212

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 37/75 (49%), Positives = 52/75 (69%), Gaps = 3/75 (4%)
 Frame = -2

Query: 218 LSTWL-CTHNTKK-MLVKIVHPGGHVELHDRPLLAAEIMLRNPRCCVAHPHVFKQP-WAI 48
           ++TW  C+    +   VK+V PGGHVEL DRP LAA++M R+PR CVA P VF++P  A+
Sbjct: 1   MATWFGCSRKAARGQHVKLVFPGGHVELLDRPTLAADVMARHPRFCVARPDVFREPAGAV 60

Query: 47  VPPDTMLRLGQKFYV 3
             PD +L LG K+++
Sbjct: 61  AAPDAVLELGHKYFI 75


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