BLASTX nr result

ID: Cimicifuga21_contig00033762 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00033762
         (304 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004141206.1| PREDICTED: pentatricopeptide repeat-containi...   151   6e-35
ref|XP_002270184.2| PREDICTED: pentatricopeptide repeat-containi...   147   7e-34
ref|XP_002304067.1| predicted protein [Populus trichocarpa] gi|2...   146   2e-33
ref|XP_002529286.1| pentatricopeptide repeat-containing protein,...   145   3e-33
ref|XP_002299667.1| predicted protein [Populus trichocarpa] gi|2...   142   4e-32

>ref|XP_004141206.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
           chloroplastic-like [Cucumis sativus]
          Length = 668

 Score =  151 bits (381), Expect = 6e-35
 Identities = 75/101 (74%), Positives = 87/101 (86%)
 Frame = -1

Query: 304 HQPEEELCFSLILQLGRVGSPSEAFSVYNMLKYSKRTMRKALHEKMLNILVAGGLLKDAY 125
           HQPEEELC SLIL LG + + SEAFSVYN+LKYSKRTM KALHEK+L+IL+AG LLKDAY
Sbjct: 484 HQPEEELCSSLILSLGNIRAYSEAFSVYNILKYSKRTMCKALHEKILHILIAGRLLKDAY 543

Query: 124 VVVKDNAERISHASLKKFAFSFMKMGNINLINDVVKAVHSS 2
           VVVKDNA  IS  +++KFAF FMK GN+NLINDV+KA+H S
Sbjct: 544 VVVKDNAGVISKPAIRKFAFGFMKFGNVNLINDVMKAIHGS 584


>ref|XP_002270184.2| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
           chloroplastic [Vitis vinifera]
           gi|298204537|emb|CBI23812.3| unnamed protein product
           [Vitis vinifera]
          Length = 659

 Score =  147 bits (372), Expect = 7e-34
 Identities = 74/101 (73%), Positives = 86/101 (85%)
 Frame = -1

Query: 304 HQPEEELCFSLILQLGRVGSPSEAFSVYNMLKYSKRTMRKALHEKMLNILVAGGLLKDAY 125
           HQPEEELC SLI  LG++ + S+AFSVYNML+YSKRTM KALHEK+L+ILVAG LLKDAY
Sbjct: 482 HQPEEELCSSLISHLGKIRAHSQAFSVYNMLRYSKRTMCKALHEKILHILVAGRLLKDAY 541

Query: 124 VVVKDNAERISHASLKKFAFSFMKMGNINLINDVVKAVHSS 2
           VVVKDN   IS  S+KKFA +FMK GN+NLINDV+KA+H S
Sbjct: 542 VVVKDNEGLISKPSIKKFATAFMKFGNVNLINDVMKAIHGS 582


>ref|XP_002304067.1| predicted protein [Populus trichocarpa] gi|222841499|gb|EEE79046.1|
           predicted protein [Populus trichocarpa]
          Length = 378

 Score =  146 bits (368), Expect = 2e-33
 Identities = 72/101 (71%), Positives = 87/101 (86%)
 Frame = -1

Query: 304 HQPEEELCFSLILQLGRVGSPSEAFSVYNMLKYSKRTMRKALHEKMLNILVAGGLLKDAY 125
           HQP EELC SL+  LG++ + SEAFSVY+MLKYSKRTM KA HEK+L+IL+AG LLKDAY
Sbjct: 267 HQPAEELCSSLLFHLGKIKAHSEAFSVYSMLKYSKRTMCKAFHEKILHILIAGKLLKDAY 326

Query: 124 VVVKDNAERISHASLKKFAFSFMKMGNINLINDVVKAVHSS 2
           VVVKDNA+ IS A++KKFA SF+K+GNINLINDV+K +H S
Sbjct: 327 VVVKDNAKFISSAAIKKFAKSFVKLGNINLINDVLKVIHGS 367


>ref|XP_002529286.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223531275|gb|EEF33118.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 672

 Score =  145 bits (367), Expect = 3e-33
 Identities = 72/101 (71%), Positives = 85/101 (84%)
 Frame = -1

Query: 304 HQPEEELCFSLILQLGRVGSPSEAFSVYNMLKYSKRTMRKALHEKMLNILVAGGLLKDAY 125
           HQPEEELC  LI  LG+  + +EAFSVY MLKY KRTM KALHEK+L++L+ G LLKDAY
Sbjct: 493 HQPEEELCSMLIFHLGKAKAYTEAFSVYTMLKYGKRTMCKALHEKILHVLLGGQLLKDAY 552

Query: 124 VVVKDNAERISHASLKKFAFSFMKMGNINLINDVVKAVHSS 2
           VVVKDNAE IS A++KKFA +FMK+GNINLINDV+K +HSS
Sbjct: 553 VVVKDNAELISQAAIKKFANAFMKLGNINLINDVMKVIHSS 593


>ref|XP_002299667.1| predicted protein [Populus trichocarpa] gi|222846925|gb|EEE84472.1|
           predicted protein [Populus trichocarpa]
          Length = 562

 Score =  142 bits (357), Expect = 4e-32
 Identities = 71/101 (70%), Positives = 86/101 (85%)
 Frame = -1

Query: 304 HQPEEELCFSLILQLGRVGSPSEAFSVYNMLKYSKRTMRKALHEKMLNILVAGGLLKDAY 125
           HQP EELC SLIL LG++ + +EAFSVY+MLK SKRTM KA HE +L+IL+AG LLKDAY
Sbjct: 385 HQPMEELCSSLILHLGKIKAHAEAFSVYSMLKSSKRTMSKAFHEDILHILIAGRLLKDAY 444

Query: 124 VVVKDNAERISHASLKKFAFSFMKMGNINLINDVVKAVHSS 2
           VVVKDNAE IS A++KKFA SF+K+G+INLINDV+K +H S
Sbjct: 445 VVVKDNAELISPAAIKKFASSFVKLGDINLINDVMKVIHGS 485


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