BLASTX nr result

ID: Cimicifuga21_contig00033760 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00033760
         (380 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523053.1| transcription factor, putative [Ricinus comm...    86   4e-15
ref|XP_002312227.1| predicted protein [Populus trichocarpa] gi|2...    80   2e-13
gb|AAV85474.1| myb family transcription factor-related protein [...    79   3e-13
ref|XP_002265800.2| PREDICTED: myb family transcription factor A...    76   3e-12
emb|CAN76008.1| hypothetical protein VITISV_013342 [Vitis vinifera]    76   3e-12

>ref|XP_002523053.1| transcription factor, putative [Ricinus communis]
           gi|223537710|gb|EEF39332.1| transcription factor,
           putative [Ricinus communis]
          Length = 346

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 43/94 (45%), Positives = 62/94 (65%), Gaps = 9/94 (9%)
 Frame = -1

Query: 380 GMSGPCLGSQED-----QIQVAPLTIDSGNEIDSIGDVYETKPGHPGDCAGDRKYDASSK 216
           G +  CLG  +D     QIQ+AP ++D G ++DSI D+YETKP   GD  G++K+DAS+K
Sbjct: 253 GSAPTCLGPPDDLFKSDQIQIAPPSMDRGTDLDSISDIYETKPMLQGDAMGEKKFDASTK 312

Query: 215 LERPSSQRSLLSMNRINPMTKGAG----RNTPYG 126
           LERPS +R+ L  +R++PM         RN+P+G
Sbjct: 313 LERPSPRRAPLPTDRMSPMINSGAMPQDRNSPFG 346


>ref|XP_002312227.1| predicted protein [Populus trichocarpa] gi|222852047|gb|EEE89594.1|
           predicted protein [Populus trichocarpa]
          Length = 365

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 40/89 (44%), Positives = 59/89 (66%), Gaps = 9/89 (10%)
 Frame = -1

Query: 365 CLGSQED-----QIQVAPLTIDSGNEIDSIGDVYETKPGHPGDCAGDRKYDASSKLERPS 201
           CLG Q+D     QIQ+AP  +DSG ++DS+  +Y TKP H GD   ++K +AS+K ERPS
Sbjct: 277 CLGPQDDPLKGDQIQIAPPLMDSGTDLDSLSGLYGTKPVHQGDALDEKKLEASAKTERPS 336

Query: 200 SQRSLLSMNRINPMTKGA----GRNTPYG 126
            +R+ L+ +R++PM        GRN+P+G
Sbjct: 337 PRRAPLAADRMSPMINTGVMPQGRNSPFG 365


>gb|AAV85474.1| myb family transcription factor-related protein [Populus tomentosa]
          Length = 356

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 45/93 (48%), Positives = 64/93 (68%), Gaps = 10/93 (10%)
 Frame = -1

Query: 374 SGP-CLGSQED-----QIQVAPLTIDSGNEIDSIGDVYETKPGHPGDCAGDRKYDASSKL 213
           SGP CL  Q+D     QIQ+AP ++D G ++DSI D+YE KP   GD   ++K++AS+KL
Sbjct: 264 SGPACLEPQDDPFKGDQIQMAPPSMDRGTDLDSISDMYEMKPALQGDGLDEKKFEASAKL 323

Query: 212 ERPSSQRSLLSMNRINPM-TKGA---GRNTPYG 126
           +RPS +RS L+  R++PM   GA   GRN+P+G
Sbjct: 324 KRPSPRRSPLAAERMSPMINTGAMPQGRNSPFG 356


>ref|XP_002265800.2| PREDICTED: myb family transcription factor APL [Vitis vinifera]
          Length = 347

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 40/81 (49%), Positives = 56/81 (69%), Gaps = 7/81 (8%)
 Frame = -1

Query: 380 GMSGPCLGSQED-----QIQVAPLTIDSGNEIDSIGDVYETKPGHPGDCAGDRKYD--AS 222
           G +  CLGSQ+D     QIQ+AP ++D G ++DSI D+YETKP   GD  G++K+D   S
Sbjct: 253 GTAASCLGSQDDPFKGDQIQIAPPSMDRGADMDSISDIYETKPILSGDPMGEKKFDGSGS 312

Query: 221 SKLERPSSQRSLLSMNRINPM 159
           +KL RPS +R+ L  +R+NPM
Sbjct: 313 AKLGRPSPRRAPLPTDRMNPM 333


>emb|CAN76008.1| hypothetical protein VITISV_013342 [Vitis vinifera]
          Length = 356

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 40/81 (49%), Positives = 56/81 (69%), Gaps = 7/81 (8%)
 Frame = -1

Query: 380 GMSGPCLGSQED-----QIQVAPLTIDSGNEIDSIGDVYETKPGHPGDCAGDRKYD--AS 222
           G +  CLGSQ+D     QIQ+AP ++D G ++DSI D+YETKP   GD  G++K+D   S
Sbjct: 262 GTAASCLGSQDDPFKGDQIQIAPPSMDRGADMDSISDIYETKPILSGDPMGEKKFDGSGS 321

Query: 221 SKLERPSSQRSLLSMNRINPM 159
           +KL RPS +R+ L  +R+NPM
Sbjct: 322 AKLGRPSPRRAPLPTDRMNPM 342


Top