BLASTX nr result

ID: Cimicifuga21_contig00033739 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00033739
         (371 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37893.3| unnamed protein product [Vitis vinifera]              204   6e-51
ref|XP_002277675.1| PREDICTED: probable endo-1,4-beta-xylanase C...   204   6e-51
ref|XP_003527601.1| PREDICTED: probable endo-1,4-beta-xylanase C...   201   5e-50
ref|XP_003604034.1| Endo-1,4-beta-xylanase A [Medicago truncatul...   201   5e-50
ref|XP_004169878.1| PREDICTED: endo-1,4-beta-xylanase C-like, pa...   197   1e-48

>emb|CBI37893.3| unnamed protein product [Vitis vinifera]
          Length = 625

 Score =  204 bits (519), Expect = 6e-51
 Identities = 93/123 (75%), Positives = 105/123 (85%)
 Frame = +2

Query: 2   VKRFNAAVFENELKWYATEAKPGHVNYTVADQMLHFVRANQISVRGHNIFWEDPVYVPAW 181
           VKRFNAAVFENELKWYATE  PG++ Y +ADQML FVRANQI  RGHNIFWEDP Y PAW
Sbjct: 305 VKRFNAAVFENELKWYATEPDPGNITYALADQMLEFVRANQIVARGHNIFWEDPKYTPAW 364

Query: 182 VRNLTRNELQAAVNSRIQSLMDKYKEEFLHWDVSNEMLHFDFYVDKLGPNATLEFFNAAH 361
           VRNL+   LQ+AVN+RIQSLM KYK+EF+HWDVSNEMLHFDFY  +LGP+ATL F+  AH
Sbjct: 365 VRNLSGPALQSAVNNRIQSLMSKYKDEFVHWDVSNEMLHFDFYEQRLGPDATLHFYETAH 424

Query: 362 QSD 370
           +SD
Sbjct: 425 ESD 427


>ref|XP_002277675.1| PREDICTED: probable endo-1,4-beta-xylanase C-like [Vitis vinifera]
          Length = 549

 Score =  204 bits (519), Expect = 6e-51
 Identities = 93/123 (75%), Positives = 105/123 (85%)
 Frame = +2

Query: 2   VKRFNAAVFENELKWYATEAKPGHVNYTVADQMLHFVRANQISVRGHNIFWEDPVYVPAW 181
           VKRFNAAVFENELKWYATE  PG++ Y +ADQML FVRANQI  RGHNIFWEDP Y PAW
Sbjct: 229 VKRFNAAVFENELKWYATEPDPGNITYALADQMLEFVRANQIVARGHNIFWEDPKYTPAW 288

Query: 182 VRNLTRNELQAAVNSRIQSLMDKYKEEFLHWDVSNEMLHFDFYVDKLGPNATLEFFNAAH 361
           VRNL+   LQ+AVN+RIQSLM KYK+EF+HWDVSNEMLHFDFY  +LGP+ATL F+  AH
Sbjct: 289 VRNLSGPALQSAVNNRIQSLMSKYKDEFVHWDVSNEMLHFDFYEQRLGPDATLHFYETAH 348

Query: 362 QSD 370
           +SD
Sbjct: 349 ESD 351


>ref|XP_003527601.1| PREDICTED: probable endo-1,4-beta-xylanase C-like [Glycine max]
          Length = 547

 Score =  201 bits (511), Expect = 5e-50
 Identities = 92/123 (74%), Positives = 102/123 (82%)
 Frame = +2

Query: 2   VKRFNAAVFENELKWYATEAKPGHVNYTVADQMLHFVRANQISVRGHNIFWEDPVYVPAW 181
           VKRFNAAVFENELKWYATE   G VNYT++DQML FVR N I  RGHNIFWEDP Y P W
Sbjct: 227 VKRFNAAVFENELKWYATEPDQGKVNYTISDQMLQFVRTNNIIARGHNIFWEDPKYTPPW 286

Query: 182 VRNLTRNELQAAVNSRIQSLMDKYKEEFLHWDVSNEMLHFDFYVDKLGPNATLEFFNAAH 361
           V NLT  +LQ+AVNSRI SLM +YK+EF+HWDVSNEMLHFDFY ++LGPNATL FF  AH
Sbjct: 287 VLNLTGTQLQSAVNSRIHSLMSQYKDEFVHWDVSNEMLHFDFYEERLGPNATLHFFQTAH 346

Query: 362 QSD 370
           +SD
Sbjct: 347 KSD 349


>ref|XP_003604034.1| Endo-1,4-beta-xylanase A [Medicago truncatula]
           gi|355493082|gb|AES74285.1| Endo-1,4-beta-xylanase A
           [Medicago truncatula]
          Length = 536

 Score =  201 bits (511), Expect = 5e-50
 Identities = 91/123 (73%), Positives = 105/123 (85%)
 Frame = +2

Query: 2   VKRFNAAVFENELKWYATEAKPGHVNYTVADQMLHFVRANQISVRGHNIFWEDPVYVPAW 181
           +KRFNAAVFENELKWYATE   G VNYT++DQM+ FVRAN+I  RGHNIFWEDP Y PAW
Sbjct: 216 LKRFNAAVFENELKWYATEPHEGSVNYTISDQMMQFVRANKIIARGHNIFWEDPKYNPAW 275

Query: 182 VRNLTRNELQAAVNSRIQSLMDKYKEEFLHWDVSNEMLHFDFYVDKLGPNATLEFFNAAH 361
           V NLT  +L++AVNSRIQSLM++YK EF+HWD+SNEMLHFDFY  +LGPNAT  FF AAH
Sbjct: 276 VLNLTGTQLRSAVNSRIQSLMNQYKTEFIHWDISNEMLHFDFYEQRLGPNATFHFFEAAH 335

Query: 362 QSD 370
           +SD
Sbjct: 336 ESD 338


>ref|XP_004169878.1| PREDICTED: endo-1,4-beta-xylanase C-like, partial [Cucumis sativus]
          Length = 527

 Score =  197 bits (500), Expect = 1e-48
 Identities = 89/123 (72%), Positives = 103/123 (83%)
 Frame = +2

Query: 2   VKRFNAAVFENELKWYATEAKPGHVNYTVADQMLHFVRANQISVRGHNIFWEDPVYVPAW 181
           VKRFNAAVFENELKWYATE KPG +NYT AD+ML FVRANQI+ RGHNIFWEDP Y P W
Sbjct: 207 VKRFNAAVFENELKWYATEPKPGVLNYTTADRMLEFVRANQITARGHNIFWEDPKYTPLW 266

Query: 182 VRNLTRNELQAAVNSRIQSLMDKYKEEFLHWDVSNEMLHFDFYVDKLGPNATLEFFNAAH 361
           V+NLT  EL++AV+SRI+ L+ +YK+EF+HWDVSNEMLHFDFY   LG NATL F+  AH
Sbjct: 267 VQNLTGEELKSAVDSRIKGLLSRYKDEFIHWDVSNEMLHFDFYEKSLGANATLHFYKTAH 326

Query: 362 QSD 370
           + D
Sbjct: 327 EID 329


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