BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00033729
         (594 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311339.1| predicted protein [Populus trichocarpa] gi|2...   145   4e-33
emb|CBI27289.3| unnamed protein product [Vitis vinifera]              138   6e-31
ref|XP_002274151.1| PREDICTED: pentatricopeptide repeat-containi...   138   6e-31
ref|XP_004135146.1| PREDICTED: pentatricopeptide repeat-containi...   131   1e-28
ref|XP_002512079.1| pentatricopeptide repeat-containing protein,...   128   6e-28

>ref|XP_002311339.1| predicted protein [Populus trichocarpa] gi|222851159|gb|EEE88706.1|
           predicted protein [Populus trichocarpa]
          Length = 654

 Score =  145 bits (367), Expect = 4e-33
 Identities = 82/150 (54%), Positives = 97/150 (64%), Gaps = 1/150 (0%)
 Frame = -2

Query: 449 MGRKSFSFPTLRQFCSKPEIPTLYSFLQPSIFALKRTP-QPFQXXXXXXXXXXXXXXLDH 273
           M R+ F     R F + PEIP LYSFLQP+IFALK+TP                    DH
Sbjct: 1   MLRRVFPLLRRRSFSTTPEIPNLYSFLQPTIFALKKTPPSTTNPATTTNRQTPKILTQDH 60

Query: 272 KTSLESNLQTSLDNHNTDEAWKSFKILTSTSNFPSKQHSNSLITHLSSLKDIHNLKRAFA 93
            T+LES L  SL  +NT+EAW SFK LTS S FPSK  +NSLITHLSSL D  NLKRAFA
Sbjct: 61  ITNLESTLHKSLITNNTNEAWASFKSLTSNSAFPSKSLTNSLITHLSSLNDTINLKRAFA 120

Query: 92  SVVFLLEKNPKVLAFETIETLLLAMKSANT 3
           S+V+++EKNPK L FET++  L +M  ANT
Sbjct: 121 SIVYVIEKNPKSLDFETVQLFLGSMVRANT 150


>emb|CBI27289.3| unnamed protein product [Vitis vinifera]
          Length = 967

 Score =  138 bits (348), Expect = 6e-31
 Identities = 76/134 (56%), Positives = 90/134 (67%)
 Frame = -2

Query: 404 SKPEIPTLYSFLQPSIFALKRTPQPFQXXXXXXXXXXXXXXLDHKTSLESNLQTSLDNHN 225
           S+ E PTLYSFLQPS+F+LK  P   +               +    LES L TSL  +N
Sbjct: 20  SESEFPTLYSFLQPSLFSLKPIPSAPRSPHPTSPKPLQSPAPE---DLESALHTSLSTNN 76

Query: 224 TDEAWKSFKILTSTSNFPSKQHSNSLITHLSSLKDIHNLKRAFASVVFLLEKNPKVLAFE 45
           TDEAWKSFK LT+ S FPSK  +NSLI HL+SL D++NLKRAFAS VFLLEKNP +L F 
Sbjct: 77  TDEAWKSFKALTTNSTFPSKSLANSLIAHLASLHDLYNLKRAFASAVFLLEKNPSLLDFG 136

Query: 44  TIETLLLAMKSANT 3
           T+ TLL +M SANT
Sbjct: 137 TVRTLLGSMNSANT 150


>ref|XP_002274151.1| PREDICTED: pentatricopeptide repeat-containing protein At1g69290
           [Vitis vinifera]
          Length = 655

 Score =  138 bits (348), Expect = 6e-31
 Identities = 76/134 (56%), Positives = 90/134 (67%)
 Frame = -2

Query: 404 SKPEIPTLYSFLQPSIFALKRTPQPFQXXXXXXXXXXXXXXLDHKTSLESNLQTSLDNHN 225
           S+ E PTLYSFLQPS+F+LK  P   +               +    LES L TSL  +N
Sbjct: 20  SESEFPTLYSFLQPSLFSLKPIPSAPRSPHPTSPKPLQSPAPE---DLESALHTSLSTNN 76

Query: 224 TDEAWKSFKILTSTSNFPSKQHSNSLITHLSSLKDIHNLKRAFASVVFLLEKNPKVLAFE 45
           TDEAWKSFK LT+ S FPSK  +NSLI HL+SL D++NLKRAFAS VFLLEKNP +L F 
Sbjct: 77  TDEAWKSFKALTTNSTFPSKSLANSLIAHLASLHDLYNLKRAFASAVFLLEKNPSLLDFG 136

Query: 44  TIETLLLAMKSANT 3
           T+ TLL +M SANT
Sbjct: 137 TVRTLLGSMNSANT 150


>ref|XP_004135146.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g69290-like [Cucumis sativus]
           gi|449517162|ref|XP_004165615.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g69290-like [Cucumis sativus]
          Length = 656

 Score =  131 bits (329), Expect = 1e-28
 Identities = 76/141 (53%), Positives = 94/141 (66%), Gaps = 3/141 (2%)
 Frame = -2

Query: 416 RQFCSKPEIP-TLYSFLQPSIFALKRTP-QPFQXXXXXXXXXXXXXXL-DHKTSLESNLQ 246
           R F S PE P +LYSFLQPS+FA KRTP  P Q                D    +E+ L 
Sbjct: 12  RSFSSVPENPPSLYSFLQPSLFARKRTPFSPSQDSTDLRQDPTPQNLTPDGVAVVETALH 71

Query: 245 TSLDNHNTDEAWKSFKILTSTSNFPSKQHSNSLITHLSSLKDIHNLKRAFASVVFLLEKN 66
            SL   +TDEAWKSFK+LT +S FPSK  +NSLI HLSS+ D+HNLKRAFASVVF++EK 
Sbjct: 72  KSLLTSDTDEAWKSFKLLTRSSAFPSKSLTNSLIAHLSSIGDVHNLKRAFASVVFVIEKK 131

Query: 65  PKVLAFETIETLLLAMKSANT 3
           P++L F +++ LL +MK ANT
Sbjct: 132 PELLDFGSVKALLASMKCANT 152


>ref|XP_002512079.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223549259|gb|EEF50748.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 650

 Score =  128 bits (322), Expect = 6e-28
 Identities = 79/159 (49%), Positives = 101/159 (63%), Gaps = 9/159 (5%)
 Frame = -2

Query: 452 MMGRKSFSFPTLRQFCSKPEIPTLYSFLQPSIFALKR--------TPQPFQXXXXXXXXX 297
           M  RK+ +F   R F +     TLYSFLQP+IF LK+        TP P           
Sbjct: 1   MWRRKAINFLPNRTFSTS----TLYSFLQPTIFTLKKPTTDPTNTTPPP----------T 46

Query: 296 XXXXXLDHKTSLESNLQTSLDNHNTDEAWKSFKILTSTSN-FPSKQHSNSLITHLSSLKD 120
                LDH  +LES +  SL  ++TD+AWKSFK LTS S+ FPSK  +NSLITHLSSL+D
Sbjct: 47  LQSLNLDHVATLESTIHNSLLTNDTDQAWKSFKFLTSNSSYFPSKSLANSLITHLSSLQD 106

Query: 119 IHNLKRAFASVVFLLEKNPKVLAFETIETLLLAMKSANT 3
             NLKRAFASV+F +EKNP+ L FET++++L +MK AN+
Sbjct: 107 TLNLKRAFASVIFFMEKNPQSLDFETVQSVLESMKFANS 145