BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00033687
         (545 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264956.1| PREDICTED: pentatricopeptide repeat-containi...    99   4e-19
ref|XP_002518527.1| pentatricopeptide repeat-containing protein,...    85   6e-15
ref|XP_002305605.1| predicted protein [Populus trichocarpa] gi|2...    83   3e-14
ref|NP_193849.2| pentatricopeptide repeat-containing protein [Ar...    75   9e-12
sp|O49558.2|PP331_ARATH RecName: Full=Pentatricopeptide repeat-c...    75   9e-12

>ref|XP_002264956.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21170-like [Vitis vinifera]
          Length = 569

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 48/73 (65%), Positives = 59/73 (80%)
 Frame = +1

Query: 1   LIGLFKERKSGEAMKVFDYMRKRNVMSCTSFSIMIVGLCYKREMRKAMKIHDEMLKMRLK 180
           L GLF E++  +A+ VFD MR +N++S TSF+IM+ GLC +RE+RKAMK HDEMLKM LK
Sbjct: 496 LNGLFMEKRIEDAVSVFDCMRSQNLLSSTSFTIMVSGLCRERELRKAMKFHDEMLKMGLK 555

Query: 181 PDEATYKRLISKF 219
           PD ATYKRLIS F
Sbjct: 556 PDRATYKRLISGF 568


>ref|XP_002518527.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223542372|gb|EEF43914.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 599

 Score = 85.1 bits (209), Expect = 6e-15
 Identities = 40/72 (55%), Positives = 55/72 (76%)
 Frame = +1

Query: 7   GLFKERKSGEAMKVFDYMRKRNVMSCTSFSIMIVGLCYKREMRKAMKIHDEMLKMRLKPD 186
           GL KE +  E++KVFDYM+   + +  SF+++I GLC  +E+RKAMK+HDEML M LKPD
Sbjct: 521 GLVKEGRVEESIKVFDYMKGLKLANSASFTVIIRGLCRAKELRKAMKLHDEMLNMGLKPD 580

Query: 187 EATYKRLISKFS 222
           + TYKRLI +F+
Sbjct: 581 KPTYKRLILEFN 592


>ref|XP_002305605.1| predicted protein [Populus trichocarpa] gi|222848569|gb|EEE86116.1|
           predicted protein [Populus trichocarpa]
          Length = 564

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 41/74 (55%), Positives = 54/74 (72%)
 Frame = +1

Query: 1   LIGLFKERKSGEAMKVFDYMRKRNVMSCTSFSIMIVGLCYKREMRKAMKIHDEMLKMRLK 180
           L GL K  +  E ++VFDYM+   +++  SF+I I GLC  +EMRKAMK+HDEML M LK
Sbjct: 490 LDGLVKNGRIEEVVRVFDYMKGLKLVNSESFTITIRGLCRAKEMRKAMKLHDEMLDMGLK 549

Query: 181 PDEATYKRLISKFS 222
           PD+A YKRLI +F+
Sbjct: 550 PDKAAYKRLILEFN 563


>ref|NP_193849.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|332659015|gb|AEE84415.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 551

 Score = 74.7 bits (182), Expect = 9e-12
 Identities = 36/62 (58%), Positives = 48/62 (77%)
 Frame = +1

Query: 34  EAMKVFDYMRKRNVMSCTSFSIMIVGLCYKREMRKAMKIHDEMLKMRLKPDEATYKRLIS 213
           EA+ VF+YM++ N ++  SF+IMI GLC  +EM+KAM+ HDEML++ LKPD  TYKRLI 
Sbjct: 489 EAVVVFEYMKEINSVNSKSFTIMIQGLCRVKEMKKAMRSHDEMLRLGLKPDLVTYKRLIL 548

Query: 214 KF 219
            F
Sbjct: 549 GF 550


>sp|O49558.2|PP331_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21170
          Length = 585

 Score = 74.7 bits (182), Expect = 9e-12
 Identities = 36/62 (58%), Positives = 48/62 (77%)
 Frame = +1

Query: 34  EAMKVFDYMRKRNVMSCTSFSIMIVGLCYKREMRKAMKIHDEMLKMRLKPDEATYKRLIS 213
           EA+ VF+YM++ N ++  SF+IMI GLC  +EM+KAM+ HDEML++ LKPD  TYKRLI 
Sbjct: 523 EAVVVFEYMKEINSVNSKSFTIMIQGLCRVKEMKKAMRSHDEMLRLGLKPDLVTYKRLIL 582

Query: 214 KF 219
            F
Sbjct: 583 GF 584