BLASTX nr result

ID: Cimicifuga21_contig00033668 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00033668
         (420 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317554.1| nbs-lrr resistance protein [Populus trichoca...    68   9e-10
gb|ABF81456.1| NBS type disease resistance protein [Populus tric...    68   9e-10
emb|CBI17460.3| unnamed protein product [Vitis vinifera]               67   1e-09
ref|XP_002268940.1| PREDICTED: disease resistance RPP13-like pro...    67   1e-09
emb|CAN63363.1| hypothetical protein VITISV_002407 [Vitis vinifera]    67   1e-09

>ref|XP_002317554.1| nbs-lrr resistance protein [Populus trichocarpa]
           gi|222860619|gb|EEE98166.1| nbs-lrr resistance protein
           [Populus trichocarpa]
          Length = 730

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 35/86 (40%), Positives = 57/86 (66%)
 Frame = +3

Query: 159 LTTAVVQVLVQELYKSITNEGLSLLGFKSEFEKMKTKLGVMESFLADAQQLEKTHKNYTT 338
           +  A+++ L ++L + +   G  ++ F+SEF  MKT+L +M+SFLADA +L++  +   T
Sbjct: 1   MAEAMIEALAEQLVQVLKKPGEYVIEFQSEFNDMKTQLDLMKSFLADAYKLKRKKE---T 57

Query: 339 VNTLLAELRDLVYDADDILLQCRTRA 416
           V T L+ LR+LVYD ++IL  C  RA
Sbjct: 58  VKTTLSMLRELVYDVEEILTDCLLRA 83


>gb|ABF81456.1| NBS type disease resistance protein [Populus trichocarpa]
          Length = 643

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 35/86 (40%), Positives = 57/86 (66%)
 Frame = +3

Query: 159 LTTAVVQVLVQELYKSITNEGLSLLGFKSEFEKMKTKLGVMESFLADAQQLEKTHKNYTT 338
           +  A+++ L ++L + +   G  ++ F+SEF  MKT+L +M+SFLADA +L++  +   T
Sbjct: 1   MAEAMIEALAEQLVQVLKKPGEYVIEFQSEFNDMKTQLDLMKSFLADAYKLKRKKE---T 57

Query: 339 VNTLLAELRDLVYDADDILLQCRTRA 416
           V T L+ LR+LVYD ++IL  C  RA
Sbjct: 58  VKTTLSMLRELVYDVEEILTDCLLRA 83


>emb|CBI17460.3| unnamed protein product [Vitis vinifera]
          Length = 1021

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 30/86 (34%), Positives = 60/86 (69%)
 Frame = +3

Query: 159 LTTAVVQVLVQELYKSITNEGLSLLGFKSEFEKMKTKLGVMESFLADAQQLEKTHKNYTT 338
           +  AVV V +++L  ++  EG  L  F+ +FE+++ +L +M+SFL DA++L++ ++   T
Sbjct: 1   MVDAVVTVFLEKLLNALEEEGRVLFDFREQFERLRDELRLMQSFLKDAERLKRKNE---T 57

Query: 339 VNTLLAELRDLVYDADDILLQCRTRA 416
           + T++  LR+L+Y+A+DIL  C+ ++
Sbjct: 58  LRTVMIGLRELIYEAEDILADCKVQS 83


>ref|XP_002268940.1| PREDICTED: disease resistance RPP13-like protein 4 [Vitis vinifera]
          Length = 850

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 30/86 (34%), Positives = 60/86 (69%)
 Frame = +3

Query: 159 LTTAVVQVLVQELYKSITNEGLSLLGFKSEFEKMKTKLGVMESFLADAQQLEKTHKNYTT 338
           +  AVV V +++L  ++  EG  L  F+ +FE+++ +L +M+SFL DA++L++ ++   T
Sbjct: 1   MVDAVVTVFLEKLLNALEEEGRVLFDFREQFERLRDELRLMQSFLKDAERLKRKNE---T 57

Query: 339 VNTLLAELRDLVYDADDILLQCRTRA 416
           + T++  LR+L+Y+A+DIL  C+ ++
Sbjct: 58  LRTVMIGLRELIYEAEDILADCKVQS 83


>emb|CAN63363.1| hypothetical protein VITISV_002407 [Vitis vinifera]
          Length = 850

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 30/86 (34%), Positives = 60/86 (69%)
 Frame = +3

Query: 159 LTTAVVQVLVQELYKSITNEGLSLLGFKSEFEKMKTKLGVMESFLADAQQLEKTHKNYTT 338
           +  AVV V +++L  ++  EG  L  F+ +FE+++ +L +M+SFL DA++L++ ++   T
Sbjct: 1   MVDAVVTVFLEKLLNALEEEGRVLFDFREQFERLRDELRLMQSFLKDAERLKRKNE---T 57

Query: 339 VNTLLAELRDLVYDADDILLQCRTRA 416
           + T++  LR+L+Y+A+DIL  C+ ++
Sbjct: 58  LRTVMIGLRELIYEAEDILADCKVQS 83


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