BLASTX nr result
ID: Cimicifuga21_contig00033665
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00033665 (522 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002307899.1| predicted protein [Populus trichocarpa] gi|2... 72 5e-11 ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2... 63 3e-08 ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ... 60 2e-07 emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera] 60 2e-07 ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ... 55 6e-06 >ref|XP_002307899.1| predicted protein [Populus trichocarpa] gi|222853875|gb|EEE91422.1| predicted protein [Populus trichocarpa] Length = 359 Score = 72.0 bits (175), Expect = 5e-11 Identities = 35/93 (37%), Positives = 53/93 (56%), Gaps = 7/93 (7%) Frame = -2 Query: 521 ESLGDQMLFIGTNPSMSVSAEGIPGFIGNCIYFTDDRWPFFAAGGNPEHVCSDNGVFYLD 342 E++G+Q++F+G N + V A PGF GNC+Y++ D W F + +D GV+ L+ Sbjct: 265 ENIGNQIIFLGRNHTKCVPAIDFPGFEGNCVYYSCDLWNHFRVLPMDQRDYADMGVYGLE 324 Query: 341 NGCIESFIP-------PDDTHSFRFHPIWITPS 264 E F P P+ HSF++ PIWITP+ Sbjct: 325 RRGKEEFFPENYGAFMPNSEHSFKYPPIWITPN 357 >ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1| predicted protein [Populus trichocarpa] Length = 393 Score = 62.8 bits (151), Expect = 3e-08 Identities = 37/90 (41%), Positives = 55/90 (61%), Gaps = 5/90 (5%) Frame = -2 Query: 518 SLGDQMLFIGTNPSMSVSAEGIPGFIGNCIYFTDDRWPFFAAGGNPEHVCS-DNGVFYLD 342 SLGD MLFIG N S+++SA G+ G +G+CIY+TDD ++A H+ D G+F L Sbjct: 307 SLGDMMLFIGENSSLALSASGLSGCMGDCIYYTDD----YSANNYDGHIGEHDLGIFKLS 362 Query: 341 NGCIESFIPPDDTHSFRF----HPIWITPS 264 +G IE +P +S+ P+WI+P+ Sbjct: 363 DGSIEP-LPCYPRNSYSRLQWPPPLWISPN 391 >ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera] Length = 389 Score = 59.7 bits (143), Expect = 2e-07 Identities = 37/90 (41%), Positives = 50/90 (55%), Gaps = 5/90 (5%) Frame = -2 Query: 518 SLGDQMLFIGTNPSMSVSAEGIPGFIGNCIYFTDD--RWPFFAAGGNPEHVCSDNGVFYL 345 SLGD+ LF+G N S+S+S+ PG GNCIY+TDD + GG D G+F L Sbjct: 307 SLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTDDYSEDNYDGIGGE-----QDLGIFNL 361 Query: 344 DNGCIESFIPPDDTHSFRFH---PIWITPS 264 ++G IE P FR P+W+TP+ Sbjct: 362 EDGSIE----PLPCSHFRIRWPPPLWVTPN 387 >emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera] Length = 389 Score = 59.7 bits (143), Expect = 2e-07 Identities = 37/90 (41%), Positives = 50/90 (55%), Gaps = 5/90 (5%) Frame = -2 Query: 518 SLGDQMLFIGTNPSMSVSAEGIPGFIGNCIYFTDD--RWPFFAAGGNPEHVCSDNGVFYL 345 SLGD+ LF+G N S+S+S+ PG GNCIY+TDD + GG D G+F L Sbjct: 307 SLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTDDYSEDNYDGIGGE-----QDLGIFNL 361 Query: 344 DNGCIESFIPPDDTHSFRFH---PIWITPS 264 ++G IE P FR P+W+TP+ Sbjct: 362 EDGSIE----PLPCSHFRIRWPPPLWVTPN 387 >ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis] gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase, putative [Ricinus communis] Length = 398 Score = 55.1 bits (131), Expect = 6e-06 Identities = 34/88 (38%), Positives = 50/88 (56%), Gaps = 3/88 (3%) Frame = -2 Query: 518 SLGDQMLFIGTNPSMSVSAEGIPGFIGNCIYFTDDRWPFFAAGGNPEHVCSDNGVFYLDN 339 +LGD+ LFIG N S+S+SA G +GNCIY+TDD G +H D G+F L + Sbjct: 312 TLGDKALFIGENSSLSLSATDFSGCMGNCIYYTDDYLDANYDGHFGDH---DLGIFKLCD 368 Query: 338 GCIESF--IPPDDTHSFRFH-PIWITPS 264 IE P + T ++ P+W++P+ Sbjct: 369 ETIEPLPCYPRNFTSPLQWSPPLWVSPN 396