BLASTX nr result

ID: Cimicifuga21_contig00033662 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00033662
         (497 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325046.1| AP2 domain-containing transcription factor [...   115   5e-24
ref|XP_002329654.1| AP2 domain-containing transcription factor [...   110   1e-22
gb|ABK93482.1| unknown [Populus trichocarpa]                          110   1e-22
gb|AAV98627.1| AP2 protein [Elaeis guineensis]                        100   2e-19
ref|XP_002268683.1| PREDICTED: AP2-like ethylene-responsive tran...    97   2e-18

>ref|XP_002325046.1| AP2 domain-containing transcription factor [Populus trichocarpa]
           gi|222866480|gb|EEF03611.1| AP2 domain-containing
           transcription factor [Populus trichocarpa]
          Length = 540

 Score =  115 bits (287), Expect = 5e-24
 Identities = 77/178 (43%), Positives = 100/178 (56%), Gaps = 29/178 (16%)
 Frame = -1

Query: 449 QNWLAFSLSNPHHY-----PST--------YESYNPTSTTTHSVDSLPQDDPTAG--PLD 315
           QNWL FSLSN HH      PS+        +E++N T TTT S     +D+  A   P D
Sbjct: 7   QNWLGFSLSNHHHMNNINIPSSSDSSNLCLFEAFNTTPTTTTSAQ---EDNAVAACRPTD 63

Query: 314 LCMFSSVGPKLEDFLG------------GG--SSDTPLSQFSGDNQSDANGVYDSELKSI 177
           + +F++ GPKLEDFLG            GG  S++TP +  +  + + ++ +YDSELK+I
Sbjct: 64  ISLFTTSGPKLEDFLGCCTTTPPSQQPLGGQFSAETPGTTATTVSDNSSSEIYDSELKTI 123

Query: 176 AASFLRGYSSSMAINASPEIDNXXXXXXXXXXXVDSSKKAVDTFGQRTSIYRGVTRHR 3
           AASFLRGYSS    N   +  +             + KK VDTFGQRTSIYRGVTRHR
Sbjct: 124 AASFLRGYSS----NDHQQTGSSQKHQQLLVQSEHAPKKTVDTFGQRTSIYRGVTRHR 177


>ref|XP_002329654.1| AP2 domain-containing transcription factor [Populus trichocarpa]
           gi|222870535|gb|EEF07666.1| AP2 domain-containing
           transcription factor [Populus trichocarpa]
          Length = 542

 Score =  110 bits (275), Expect = 1e-22
 Identities = 71/182 (39%), Positives = 99/182 (54%), Gaps = 33/182 (18%)
 Frame = -1

Query: 449 QNWLAFSLSNPHHYPST--------------YESYNPTSTTTHSVDSLPQDDPTAGPLDL 312
           QNWL FSLSN HH  +T              +E++N T+T+   V+++          D+
Sbjct: 7   QNWLGFSLSNHHHMNNTINIPTSSDSSHLCLFEAFNTTTTSAQEVNAVVA---AGRATDI 63

Query: 311 CMFSSVGPKLEDFLGGGSSDTP---------LSQFSGD----------NQSDANGVYDSE 189
            +F++ GPKLEDFLGG +S +P           QFS +          + S ++ +YDSE
Sbjct: 64  SLFTASGPKLEDFLGGCTSTSPSQTPQQQPLCGQFSTETPVTTTATALSDSTSSEIYDSE 123

Query: 188 LKSIAASFLRGYSSSMAINASPEIDNXXXXXXXXXXXVDSSKKAVDTFGQRTSIYRGVTR 9
           LK+IAASFLRG++S+       +ID+             + KK V+TFGQRTSIYRGVTR
Sbjct: 124 LKTIAASFLRGFAST----DHQKIDSTQKHQQLLVQAEHAPKKTVETFGQRTSIYRGVTR 179

Query: 8   HR 3
           HR
Sbjct: 180 HR 181


>gb|ABK93482.1| unknown [Populus trichocarpa]
          Length = 545

 Score =  110 bits (275), Expect = 1e-22
 Identities = 71/182 (39%), Positives = 99/182 (54%), Gaps = 33/182 (18%)
 Frame = -1

Query: 449 QNWLAFSLSNPHHYPST--------------YESYNPTSTTTHSVDSLPQDDPTAGPLDL 312
           QNWL FSLSN HH  +T              +E++N T+T+   V+++          D+
Sbjct: 7   QNWLGFSLSNHHHMNNTINIPTSSDSSHLCLFEAFNTTTTSAQEVNAVVA---AGRATDI 63

Query: 311 CMFSSVGPKLEDFLGGGSSDTP---------LSQFSGD----------NQSDANGVYDSE 189
            +F++ GPKLEDFLGG +S +P           QFS +          + S ++ +YDSE
Sbjct: 64  SLFTASGPKLEDFLGGCTSTSPSQTPQQQPLCGQFSTETPVTTTATTLSDSTSSEIYDSE 123

Query: 188 LKSIAASFLRGYSSSMAINASPEIDNXXXXXXXXXXXVDSSKKAVDTFGQRTSIYRGVTR 9
           LK+IAASFLRG++S+       +ID+             + KK V+TFGQRTSIYRGVTR
Sbjct: 124 LKTIAASFLRGFAST----DHQKIDSTQKHQQLLVQAEHAPKKTVETFGQRTSIYRGVTR 179

Query: 8   HR 3
           HR
Sbjct: 180 HR 181


>gb|AAV98627.1| AP2 protein [Elaeis guineensis]
          Length = 478

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 65/154 (42%), Positives = 85/154 (55%), Gaps = 6/154 (3%)
 Frame = -1

Query: 446 NWLAFSLSNPHHYPSTYESYNPTSTTTHSVDSLPQDDPTAGPLDLCMFSSVGPKLEDFLG 267
           +WLAFSLS  +H P   E+ +  S   H    +  ++   G  ++   + VGPKLEDFLG
Sbjct: 8   SWLAFSLS--YHQPYLLEALS--SAPPHGGGGMTAEE-RGGSAEVAAMAVVGPKLEDFLG 62

Query: 266 GGSSDTPLSQFSGDNQSDANGVYDSELKSIAASFLRGY------SSSMAINASPEIDNXX 105
           G     P+ +++G    DA G+YDSELK IAA +L+G        S MA  A+P      
Sbjct: 63  GCGE--PMGRYAGGETGDAGGIYDSELKHIAAGYLQGLPATEQQDSEMAKVAAPA----- 115

Query: 104 XXXXXXXXXVDSSKKAVDTFGQRTSIYRGVTRHR 3
                       S+KAV+TFGQRTSIYRGVTRHR
Sbjct: 116 -----------ESRKAVETFGQRTSIYRGVTRHR 138


>ref|XP_002268683.1| PREDICTED: AP2-like ethylene-responsive transcription factor
           AIL5-like [Vitis vinifera]
          Length = 501

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 73/160 (45%), Positives = 88/160 (55%), Gaps = 12/160 (7%)
 Frame = -1

Query: 446 NWLAFSLSNPHHYPSTYES---YNPTSTTTHSVDSLPQDD--PTAGPLDLCMFSSVGPKL 282
           NWLAFSLSN +  PS       +   S +TH    + ++   P  G  DL      GPKL
Sbjct: 6   NWLAFSLSN-NSLPSDSSQLCLFEALSASTHHNGGVDREQGFPDRGGSDLIG----GPKL 60

Query: 281 EDFLGGGS----SDTPLSQFSGDNQ---SDANGVYDSELKSIAASFLRGYSSSMAINASP 123
           EDFLGGG     +   L QFS       SDA  +Y+SELK+IAASFLRG+SS  +  A  
Sbjct: 61  EDFLGGGGGGGGAGAGLDQFSAKTPAGLSDAE-IYESELKTIAASFLRGFSSEQS-EAQK 118

Query: 122 EIDNXXXXXXXXXXXVDSSKKAVDTFGQRTSIYRGVTRHR 3
           ++               S KK+VDTFGQRTSIYRGVTRHR
Sbjct: 119 QL---------ALTPEPSPKKSVDTFGQRTSIYRGVTRHR 149


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