BLASTX nr result

ID: Cimicifuga21_contig00033659 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00033659
         (324 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302510.1| histone ubiquitination proteins group [Popul...    88   6e-16
ref|XP_002511625.1| protein binding protein, putative [Ricinus c...    85   5e-15
ref|XP_002274055.1| PREDICTED: E3 ubiquitin-protein ligase BRE1-...    84   2e-14
emb|CBI16629.3| unnamed protein product [Vitis vinifera]               84   2e-14
emb|CAN69177.1| hypothetical protein VITISV_024408 [Vitis vinifera]    84   2e-14

>ref|XP_002302510.1| histone ubiquitination proteins group [Populus trichocarpa]
           gi|222844236|gb|EEE81783.1| histone ubiquitination
           proteins group [Populus trichocarpa]
          Length = 877

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 49/107 (45%), Positives = 68/107 (63%)
 Frame = +1

Query: 4   DLESCSIYTKGSTNNGQDFKDFSVFADKESPSPEDTFLSRLLETGATESCSANNTCNRVE 183
           DLE+CS  T+   +NGQD K   V  D+ S   +D FLSRL+ETGATES S+NN  +++E
Sbjct: 88  DLETCSNRTR-EWSNGQDVKHIPVTKDESSSFLKDAFLSRLMETGATESSSSNNCPDQME 146

Query: 184 VDYEAYSTQTRNILRNIVTSIGDLWNFEHGLSDAMLKTLLTIDPSRK 324
           VD E    + +N++ NIV +I  LW+ + GL  A+LK L   D  R+
Sbjct: 147 VDIETAFEKNKNVVHNIVDTINGLWHLKDGLHAAVLKQLPEDDACRQ 193


>ref|XP_002511625.1| protein binding protein, putative [Ricinus communis]
           gi|223548805|gb|EEF50294.1| protein binding protein,
           putative [Ricinus communis]
          Length = 420

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 49/99 (49%), Positives = 64/99 (64%)
 Frame = +1

Query: 4   DLESCSIYTKGSTNNGQDFKDFSVFADKESPSPEDTFLSRLLETGATESCSANNTCNRVE 183
           DLE  S  T+ S N GQ+ + FS+  D  S S ED FLSRL ETGATE+ S NN  N +E
Sbjct: 96  DLEVHSNRTRES-NIGQNIRSFSINEDGVSSSFEDAFLSRLAETGATETSSINNCLNHIE 154

Query: 184 VDYEAYSTQTRNILRNIVTSIGDLWNFEHGLSDAMLKTL 300
            D E  S + +N+L NIV++I DLW+ + GL  A+LK +
Sbjct: 155 EDEENTSEKIKNMLYNIVSAINDLWHLKDGLHAALLKEI 193


>ref|XP_002274055.1| PREDICTED: E3 ubiquitin-protein ligase BRE1-like 1-like [Vitis
           vinifera]
          Length = 901

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 47/100 (47%), Positives = 65/100 (65%)
 Frame = +1

Query: 1   DDLESCSIYTKGSTNNGQDFKDFSVFADKESPSPEDTFLSRLLETGATESCSANNTCNRV 180
           D+LE+CS++ K S + G+  K  S   D  S   +D FLSRL+ETGATESCSAN+  +R+
Sbjct: 94  DNLETCSVHLKDSASAGRHVKLPSTTEDGNS-CLQDAFLSRLIETGATESCSANDFSDRM 152

Query: 181 EVDYEAYSTQTRNILRNIVTSIGDLWNFEHGLSDAMLKTL 300
           E D      +T+N L NIV++I DLW  + GL  A+L+ L
Sbjct: 153 EEDRPTSCGKTKNSLSNIVSTINDLWCLKDGLYAAVLEAL 192


>emb|CBI16629.3| unnamed protein product [Vitis vinifera]
          Length = 878

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 47/100 (47%), Positives = 65/100 (65%)
 Frame = +1

Query: 1   DDLESCSIYTKGSTNNGQDFKDFSVFADKESPSPEDTFLSRLLETGATESCSANNTCNRV 180
           D+LE+CS++ K S + G+  K  S   D  S   +D FLSRL+ETGATESCSAN+  +R+
Sbjct: 94  DNLETCSVHLKDSASAGRHVKLPSTTEDGNS-CLQDAFLSRLIETGATESCSANDFSDRM 152

Query: 181 EVDYEAYSTQTRNILRNIVTSIGDLWNFEHGLSDAMLKTL 300
           E D      +T+N L NIV++I DLW  + GL  A+L+ L
Sbjct: 153 EEDRPTSCGKTKNSLSNIVSTINDLWCLKDGLYAAVLEAL 192


>emb|CAN69177.1| hypothetical protein VITISV_024408 [Vitis vinifera]
          Length = 864

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 47/100 (47%), Positives = 65/100 (65%)
 Frame = +1

Query: 1   DDLESCSIYTKGSTNNGQDFKDFSVFADKESPSPEDTFLSRLLETGATESCSANNTCNRV 180
           D+LE+CS++ K S + G+  K  S   D  S   +D FLSRL+ETGATESCSAN+  +R+
Sbjct: 94  DNLETCSVHLKDSASAGRHVKLPSTTEDGNS-CLQDAFLSRLIETGATESCSANDFSDRM 152

Query: 181 EVDYEAYSTQTRNILRNIVTSIGDLWNFEHGLSDAMLKTL 300
           E D      +T+N L NIV++I DLW  + GL  A+L+ L
Sbjct: 153 EEDRPTSCGKTKNSLSNIVSTINDLWCLKDGLYAAVLEAL 192


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