BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00033651
         (321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD63162.1| RNase H family protein [Asparagus officinalis]          58   7e-07
gb|ABD63139.1| Reverse transcriptase family protein [Asparagus o...    58   9e-07
gb|ABD63192.1| Reverse transcriptase family protein [Asparagus o...    57   2e-06
gb|AAK92670.1|AC090714_3 putative gag-pol precursor [Oryza sativ...    57   2e-06
gb|ABF97101.1| retrotransposon protein, putative, unclassified [...    57   2e-06

>gb|ABD63162.1| RNase H family protein [Asparagus officinalis]
          Length = 1189

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 28/69 (40%), Positives = 45/69 (65%), Gaps = 1/69 (1%)
 Frame = +3

Query: 117 EQGPPTLDKLLEVQIGASVE-ETTFISAELSREDQHDLCILLRKNSHVFAWSVEQMPGIH 293
           ++ PPT DK+++V +G   + +  FI+ +LS  ++ DL  L+R+   VFAW+ E MPG+ 
Sbjct: 103 QREPPTEDKVIQVNMGDEHDPKPIFIAEDLSSSEKEDLISLIREYIDVFAWNYEDMPGLD 162

Query: 294 PSVACHKLD 320
           P VA H L+
Sbjct: 163 PKVAMHHLN 171


>gb|ABD63139.1| Reverse transcriptase family protein [Asparagus officinalis]
          Length = 1181

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 27/69 (39%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
 Frame = +3

Query: 117 EQGPPTLDKLLEVQIG-ASVEETTFISAELSREDQHDLCILLRKNSHVFAWSVEQMPGIH 293
           ++ PPT DK++++ +G  S  +  FI+ +LS  ++ +L  L+R+   VFAW+ E MPG+ 
Sbjct: 607 QREPPTEDKVIQINMGDESNPKPIFIAEDLSSSEKENLISLIREYIDVFAWNYEDMPGLD 666

Query: 294 PSVACHKLD 320
           P VA H+L+
Sbjct: 667 PKVAMHRLN 675


>gb|ABD63192.1| Reverse transcriptase family protein [Asparagus officinalis]
          Length = 1146

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 26/69 (37%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
 Frame = +3

Query: 117 EQGPPTLDKLLEVQIGASVE-ETTFISAELSREDQHDLCILLRKNSHVFAWSVEQMPGIH 293
           ++ PPT DK++++ +G     +  FIS  L   ++ +L  L+++   VFAW+ E MPG+ 
Sbjct: 438 QREPPTEDKIVQINMGDEANPKPIFISDSLLSNEKEELIALVKEYIDVFAWNYEDMPGLD 497

Query: 294 PSVACHKLD 320
           P+VA H+LD
Sbjct: 498 PNVAMHRLD 506


>gb|AAK92670.1|AC090714_3 putative gag-pol precursor [Oryza sativa Japonica Group]
          Length = 1262

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 28/68 (41%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
 Frame = +3

Query: 117 EQGPPTLDKLLEVQIGASVE-ETTFISAELSREDQHDLCILLRKNSHVFAWSVEQMPGIH 293
           E+  PT+D L+E+ +G   +   TF+SA LS E+Q      L +    FAW+ ++MPG+ 
Sbjct: 279 EEKQPTIDDLVEINLGTMDDPRPTFVSAALSAEEQESYRSFLMEYRDCFAWTYKEMPGLD 338

Query: 294 PSVACHKL 317
           P VA HKL
Sbjct: 339 PRVATHKL 346


>gb|ABF97101.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1269

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 28/68 (41%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
 Frame = +3

Query: 117 EQGPPTLDKLLEVQIGASVE-ETTFISAELSREDQHDLCILLRKNSHVFAWSVEQMPGIH 293
           E+  PT+D L+E+ +G   +   TF+SA LS E+Q      L +    FAW+ ++MPG+ 
Sbjct: 279 EEKQPTIDDLVEINLGTMDDPRPTFVSAALSAEEQESYRSFLMEYRDCFAWTYKEMPGLD 338

Query: 294 PSVACHKL 317
           P VA HKL
Sbjct: 339 PRVATHKL 346