BLASTX nr result

ID: Cimicifuga21_contig00033627 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00033627
         (567 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330552.1| hypothetical protein POPTRDRAFT_270173 [Popu...   154   1e-35
ref|XP_002264328.2| PREDICTED: small RNA 2'-O-methyltransferase-...   148   7e-34
emb|CBI31031.3| unnamed protein product [Vitis vinifera]              148   7e-34
ref|XP_002523181.1| conserved hypothetical protein [Ricinus comm...   146   3e-33
ref|XP_002300565.1| hypothetical protein POPTRDRAFT_177484 [Popu...   141   6e-32

>ref|XP_002330552.1| hypothetical protein POPTRDRAFT_270173 [Populus trichocarpa]
           gi|222872110|gb|EEF09241.1| hypothetical protein
           POPTRDRAFT_270173 [Populus trichocarpa]
          Length = 916

 Score =  154 bits (388), Expect = 1e-35
 Identities = 92/174 (52%), Positives = 108/174 (62%), Gaps = 2/174 (1%)
 Frame = -3

Query: 517 RCEVKILSKNKDLIIECSPQGSFRKQNDAIQNASLKVLLWLKKYFKQQHVPLEKLSSSED 338
           RCEVK+ SK +DLIIECSP+  +RKQ DA  +ASLKVL WL  YFK   +PLEKL+ S D
Sbjct: 447 RCEVKVFSKGRDLIIECSPKEIYRKQTDATHSASLKVLSWLNAYFKDLGMPLEKLNCSAD 506

Query: 337 IDGIRVCPLTFRKEFALYLSVHNVKQNSGLQKCTSLGSKCTDQFSNQNGLHSL--NIEGP 164
              I      F KEFAL  S+HNV+Q SG Q      SK TD     +G      NIEG 
Sbjct: 507 ALDISFSLENFHKEFALSQSIHNVQQ-SGTQGSKLPESKSTDMQYTLSGQDVCLPNIEGS 565

Query: 163 DSGVYPSSGSLACVCYSISLKQEGECMKELVESYXXXXXEIGTGAVTPLLEACV 2
           DSGV+PS+GSL C+ YS+SL  EG   KEL+ES      E+G GAV   LEA V
Sbjct: 566 DSGVFPSNGSLLCISYSVSLVTEGGHTKELIESKDEFEFEMGAGAVISALEAVV 619


>ref|XP_002264328.2| PREDICTED: small RNA 2'-O-methyltransferase-like [Vitis vinifera]
          Length = 948

 Score =  148 bits (373), Expect = 7e-34
 Identities = 89/176 (50%), Positives = 112/176 (63%), Gaps = 2/176 (1%)
 Frame = -3

Query: 523 TIRCEVKILSKNKDLIIECSPQGSFRKQNDAIQNASLKVLLWLKKYFKQQHVPLEKLSSS 344
           T  CE+KI SK +DLIIE SP+ S+RK +DA+QN+SL+VLL L  YFK+  +PLEKL+S+
Sbjct: 458 TFMCEIKIYSKLQDLIIEYSPKDSYRKHSDALQNSSLRVLLCLNTYFKELDMPLEKLASA 517

Query: 343 EDIDGIRVCPLTFRKEFALYLSVHNVKQNSGLQKCTSLGSKCTDQFSNQNG--LHSLNIE 170
            D   I + P  F K FA   S+HN++Q +  Q+   L S   +Q     G  L+S NI+
Sbjct: 518 AD---IHIYPEKFAKTFASCPSIHNLRQRNETQRERLLDSNSINQPYIMPGHELYSFNIK 574

Query: 169 GPDSGVYPSSGSLACVCYSISLKQEGECMKELVESYXXXXXEIGTGAVTPLLEACV 2
           GPDSG  PS+GSLAC+ Y   L  EGE MKE VES      EIG GAV P LE  V
Sbjct: 575 GPDSGTSPSNGSLACINYVAFLVAEGEHMKERVESNDEFEFEIGVGAVIPHLEVVV 630


>emb|CBI31031.3| unnamed protein product [Vitis vinifera]
          Length = 931

 Score =  148 bits (373), Expect = 7e-34
 Identities = 89/176 (50%), Positives = 112/176 (63%), Gaps = 2/176 (1%)
 Frame = -3

Query: 523 TIRCEVKILSKNKDLIIECSPQGSFRKQNDAIQNASLKVLLWLKKYFKQQHVPLEKLSSS 344
           T  CE+KI SK +DLIIE SP+ S+RK +DA+QN+SL+VLL L  YFK+  +PLEKL+S+
Sbjct: 426 TFMCEIKIYSKLQDLIIEYSPKDSYRKHSDALQNSSLRVLLCLNTYFKELDMPLEKLASA 485

Query: 343 EDIDGIRVCPLTFRKEFALYLSVHNVKQNSGLQKCTSLGSKCTDQFSNQNG--LHSLNIE 170
            D   I + P  F K FA   S+HN++Q +  Q+   L S   +Q     G  L+S NI+
Sbjct: 486 AD---IHIYPEKFAKTFASCPSIHNLRQRNETQRERLLDSNSINQPYIMPGHELYSFNIK 542

Query: 169 GPDSGVYPSSGSLACVCYSISLKQEGECMKELVESYXXXXXEIGTGAVTPLLEACV 2
           GPDSG  PS+GSLAC+ Y   L  EGE MKE VES      EIG GAV P LE  V
Sbjct: 543 GPDSGTSPSNGSLACINYVAFLVAEGEHMKERVESNDEFEFEIGVGAVIPHLEVVV 598


>ref|XP_002523181.1| conserved hypothetical protein [Ricinus communis]
           gi|223537588|gb|EEF39212.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 970

 Score =  146 bits (368), Expect = 3e-33
 Identities = 84/173 (48%), Positives = 108/173 (62%), Gaps = 4/173 (2%)
 Frame = -3

Query: 517 RCEVKILSKNKDLIIECSPQGSFRKQNDAIQNASLKVLLWLKKYFKQQHVPLEKLSSSED 338
           RC+VKI SK +DLIIECSP+  ++KQND++ NASLK+L WL  YFK   +P+EKL+ S  
Sbjct: 480 RCKVKITSKCRDLIIECSPKEIYKKQNDSVHNASLKILSWLNGYFKDPGMPVEKLNHSAS 539

Query: 337 IDGIRVCPLTFRKEFALYLSVHNV----KQNSGLQKCTSLGSKCTDQFSNQNGLHSLNIE 170
           +  I+ CP  F KEF+L  SVH +    KQ   L +  S+         N   + S NIE
Sbjct: 540 VLDIQFCPENFFKEFSLCPSVHTLQHEGKQEGTLPEAISVNVPYASLGQN---VFSFNIE 596

Query: 169 GPDSGVYPSSGSLACVCYSISLKQEGECMKELVESYXXXXXEIGTGAVTPLLE 11
           G DSGV PS+GSL C+ Y +SL  EG+  KEL+ES      E+GTGAV   LE
Sbjct: 597 GSDSGVCPSNGSLLCISYFVSLVSEGKHTKELLESNAEFEFEMGTGAVISPLE 649


>ref|XP_002300565.1| hypothetical protein POPTRDRAFT_177484 [Populus trichocarpa]
           gi|222847823|gb|EEE85370.1| hypothetical protein
           POPTRDRAFT_177484 [Populus trichocarpa]
          Length = 926

 Score =  141 bits (356), Expect = 6e-32
 Identities = 87/176 (49%), Positives = 106/176 (60%), Gaps = 2/176 (1%)
 Frame = -3

Query: 523 TIRCEVKILSKNKDLIIECSPQGSFRKQNDAIQNASLKVLLWLKKYFKQQHVPLEKLSSS 344
           + RC+VK+ SK +DLIIECSP+  ++KQ DAIQ+ASLKVL WL  YFK   +PLEKL  S
Sbjct: 457 SFRCKVKVFSKGQDLIIECSPKEIYKKQTDAIQSASLKVLSWLNAYFKDLGMPLEKLKCS 516

Query: 343 EDIDGIRVCPLTFRKEFALYLSVHNVKQNSGLQKCTSLGSKCTDQFSNQNGLHSL--NIE 170
            D   I +    F KEFAL  S+HNV+Q S  Q      SK T+     +G      NIE
Sbjct: 517 ADALDISLSSENFLKEFALCQSLHNVQQ-SRCQGSKLPESKSTNMEYTLSGQDVCLPNIE 575

Query: 169 GPDSGVYPSSGSLACVCYSISLKQEGECMKELVESYXXXXXEIGTGAVTPLLEACV 2
           G  SGV PS+GSL C+ Y++SL  EG   KEL+ES      EIG G V   LE  V
Sbjct: 576 GSYSGVCPSNGSLLCISYTVSLVTEGGHTKELIESKDEFEFEIGNGTVVSTLEGVV 631


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