BLASTX nr result

ID: Cimicifuga21_contig00033625 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00033625
         (218 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280144.2| PREDICTED: pentatricopeptide repeat-containi...   107   1e-21
emb|CBI26355.3| unnamed protein product [Vitis vinifera]              107   1e-21
ref|XP_003578611.1| PREDICTED: pentatricopeptide repeat-containi...   102   3e-20
emb|CBI35966.3| unnamed protein product [Vitis vinifera]              101   5e-20
emb|CBI30147.3| unnamed protein product [Vitis vinifera]              101   7e-20

>ref|XP_002280144.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Vitis vinifera]
          Length = 642

 Score =  107 bits (266), Expect = 1e-21
 Identities = 48/72 (66%), Positives = 56/72 (77%)
 Frame = +1

Query: 1   IGVLCACMHSGLIEEGRKYFKQMEEEKGIVPKVEHYGCIVDLLGRGGCVIEAYELIKNMP 180
           +GVL AC H GL++EGRKYFKQM EE GI P  +HY C+VDLLGR GC+ EAY LI+NMP
Sbjct: 462 LGVLTACNHGGLVDEGRKYFKQMTEEFGIQPSEKHYACVVDLLGRVGCLEEAYNLIRNMP 521

Query: 181 FPPDSGIWGALL 216
             P S +WGALL
Sbjct: 522 IAPHSVVWGALL 533


>emb|CBI26355.3| unnamed protein product [Vitis vinifera]
          Length = 550

 Score =  107 bits (266), Expect = 1e-21
 Identities = 48/72 (66%), Positives = 56/72 (77%)
 Frame = +1

Query: 1   IGVLCACMHSGLIEEGRKYFKQMEEEKGIVPKVEHYGCIVDLLGRGGCVIEAYELIKNMP 180
           +GVL AC H GL++EGRKYFKQM EE GI P  +HY C+VDLLGR GC+ EAY LI+NMP
Sbjct: 370 LGVLTACNHGGLVDEGRKYFKQMTEEFGIQPSEKHYACVVDLLGRVGCLEEAYNLIRNMP 429

Query: 181 FPPDSGIWGALL 216
             P S +WGALL
Sbjct: 430 IAPHSVVWGALL 441


>ref|XP_003578611.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Brachypodium distachyon]
          Length = 600

 Score =  102 bits (254), Expect = 3e-20
 Identities = 43/72 (59%), Positives = 57/72 (79%)
 Frame = +1

Query: 1   IGVLCACMHSGLIEEGRKYFKQMEEEKGIVPKVEHYGCIVDLLGRGGCVIEAYELIKNMP 180
           I VL AC H G +EEGR+YF  ME + G+VP++EHYGC++DLLGRGG + EA +LIK+MP
Sbjct: 419 INVLSACTHMGFVEEGRRYFANMERDYGVVPQIEHYGCMIDLLGRGGLIKEAVDLIKSMP 478

Query: 181 FPPDSGIWGALL 216
           + P+  IWG+LL
Sbjct: 479 WDPNEVIWGSLL 490


>emb|CBI35966.3| unnamed protein product [Vitis vinifera]
          Length = 624

 Score =  101 bits (252), Expect = 5e-20
 Identities = 47/72 (65%), Positives = 56/72 (77%)
 Frame = +1

Query: 1   IGVLCACMHSGLIEEGRKYFKQMEEEKGIVPKVEHYGCIVDLLGRGGCVIEAYELIKNMP 180
           IGVL AC HSGL+EEGR  F  M ++ G+ PK+EHY C+VDLLGR G + EAYEL++NM 
Sbjct: 434 IGVLSACNHSGLVEEGRVQFSSMADKHGLSPKLEHYACMVDLLGRAGHLKEAYELVQNML 493

Query: 181 FPPDSGIWGALL 216
            PPDS IWGALL
Sbjct: 494 IPPDSIIWGALL 505


>emb|CBI30147.3| unnamed protein product [Vitis vinifera]
          Length = 538

 Score =  101 bits (251), Expect = 7e-20
 Identities = 46/72 (63%), Positives = 57/72 (79%)
 Frame = +1

Query: 1   IGVLCACMHSGLIEEGRKYFKQMEEEKGIVPKVEHYGCIVDLLGRGGCVIEAYELIKNMP 180
           +GVLCAC HSGLIEEG+K F+ M    GI P++EHYGC+VDLLGR GC+ EAY+L++ MP
Sbjct: 240 VGVLCACGHSGLIEEGKKLFESMFNAYGIKPQMEHYGCMVDLLGRYGCLEEAYDLVQKMP 299

Query: 181 FPPDSGIWGALL 216
           F  +S IW ALL
Sbjct: 300 FEANSVIWRALL 311


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