BLASTX nr result

ID: Cimicifuga21_contig00033617 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00033617
         (260 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28140.3| unnamed protein product [Vitis vinifera]               92   6e-17
ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containi...    92   6e-17
ref|XP_002271484.1| PREDICTED: pentatricopeptide repeat-containi...    90   2e-16
emb|CAN72195.1| hypothetical protein VITISV_014979 [Vitis vinifera]    90   2e-16
tpg|DAA57875.1| TPA: hypothetical protein ZEAMMB73_657034, parti...    90   2e-16

>emb|CBI28140.3| unnamed protein product [Vitis vinifera]
          Length = 580

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 34/48 (70%), Positives = 45/48 (93%)
 Frame = -3

Query: 258 VMKNLRICTDCHRFMKFVSKVYNKEIVIRDRNRFHHFNEGSCSCKDYW 115
           V+KNLR+C+DCH  MKF+S+VYN+EI++RDRNRFHHF +GSCSC+D+W
Sbjct: 533 VVKNLRVCSDCHSAMKFISEVYNREIIVRDRNRFHHFTKGSCSCRDFW 580


>ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic [Vitis vinifera]
          Length = 711

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 34/48 (70%), Positives = 45/48 (93%)
 Frame = -3

Query: 258 VMKNLRICTDCHRFMKFVSKVYNKEIVIRDRNRFHHFNEGSCSCKDYW 115
           V+KNLR+C+DCH  MKF+S+VYN+EI++RDRNRFHHF +GSCSC+D+W
Sbjct: 664 VVKNLRVCSDCHSAMKFISEVYNREIIVRDRNRFHHFTKGSCSCRDFW 711


>ref|XP_002271484.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Vitis vinifera]
          Length = 558

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 36/48 (75%), Positives = 43/48 (89%)
 Frame = -3

Query: 258 VMKNLRICTDCHRFMKFVSKVYNKEIVIRDRNRFHHFNEGSCSCKDYW 115
           VMKNLRIC DCH FMK+ S V+ +EI+IRDRNRFHHF++GSCSC+DYW
Sbjct: 511 VMKNLRICHDCHCFMKYASDVFEREIIIRDRNRFHHFSKGSCSCRDYW 558


>emb|CAN72195.1| hypothetical protein VITISV_014979 [Vitis vinifera]
          Length = 558

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 36/48 (75%), Positives = 43/48 (89%)
 Frame = -3

Query: 258 VMKNLRICTDCHRFMKFVSKVYNKEIVIRDRNRFHHFNEGSCSCKDYW 115
           VMKNLRIC DCH FMK+ S V+ +EI+IRDRNRFHHF++GSCSC+DYW
Sbjct: 511 VMKNLRICHDCHCFMKYASDVFEREIIIRDRNRFHHFSKGSCSCRDYW 558


>tpg|DAA57875.1| TPA: hypothetical protein ZEAMMB73_657034, partial [Zea mays]
          Length = 1822

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 34/48 (70%), Positives = 43/48 (89%)
 Frame = -3

Query: 258  VMKNLRICTDCHRFMKFVSKVYNKEIVIRDRNRFHHFNEGSCSCKDYW 115
            ++KNLR+C DCHR++K VSKV+N+EIV+RDRNRFHHF  G CSC+DYW
Sbjct: 1775 IVKNLRVCMDCHRYIKLVSKVFNREIVMRDRNRFHHFKGGECSCRDYW 1822


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