BLASTX nr result
ID: Cimicifuga21_contig00033595
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00033595
(268 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat... 98 8e-19
ref|XP_003525742.1| PREDICTED: putative pentatricopeptide repeat... 96 4e-18
ref|XP_003604673.1| hypothetical protein MTR_4g015760 [Medicago ... 96 4e-18
ref|XP_003525738.1| PREDICTED: putative pentatricopeptide repeat... 95 7e-18
emb|CBI34855.3| unnamed protein product [Vitis vinifera] 88 6e-16
>ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1291
Score = 97.8 bits (242), Expect = 8e-19
Identities = 49/89 (55%), Positives = 57/89 (64%)
Frame = -1
Query: 268 GKSVHGFIIRMGLDTXXXXXXXXXXLYAKTGCVGTTKNLFCAMNEKDVISWSSMIGCYAH 89
G VHG +IR D LYAKTGC NLF M EKDVISWS+MI CYA+
Sbjct: 225 GSCVHGLVIRREFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYAN 284
Query: 88 NGKTTQALEVFNEMVENRFEPNSITVVSA 2
N +AL +F+EM+E RFEPNS+TVVSA
Sbjct: 285 NEAANEALNLFHEMIEKRFEPNSVTVVSA 313
Score = 65.5 bits (158), Expect = 4e-09
Identities = 32/86 (37%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
Frame = -1
Query: 259 VHGFIIRMGLDTXXXXXXXXXXLYAKTGCVGTTKNLFCAMNEKDVISWSSMIGCYAHNGK 80
+HG+++R G ++ LY+K G +G LF M +DV+ WSSMI Y +G+
Sbjct: 430 LHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGR 489
Query: 79 TTQALEVFNEMVEN-RFEPNSITVVS 5
+ALE+F++MV+N PN++T +S
Sbjct: 490 GGEALEIFDQMVKNSTVRPNNVTFLS 515
Score = 54.7 bits (130), Expect = 8e-06
Identities = 27/88 (30%), Positives = 46/88 (52%)
Frame = -1
Query: 268 GKSVHGFIIRMGLDTXXXXXXXXXXLYAKTGCVGTTKNLFCAMNEKDVISWSSMIGCYAH 89
GK +H ++ G +YAK G + + +F M +D++SW+SMI YAH
Sbjct: 837 GKVIHQHLVCCGCSNDLFVDAALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAH 896
Query: 88 NGKTTQALEVFNEMVENRFEPNSITVVS 5
NG ++ L F+ M + PN ++++S
Sbjct: 897 NGYNSETLGFFDLMRSSGVIPNRVSILS 924
>ref|XP_003525742.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g01580-like [Glycine max]
Length = 700
Score = 95.5 bits (236), Expect = 4e-18
Identities = 46/89 (51%), Positives = 57/89 (64%)
Frame = -1
Query: 268 GKSVHGFIIRMGLDTXXXXXXXXXXLYAKTGCVGTTKNLFCAMNEKDVISWSSMIGCYAH 89
G+SVHGF+ R G DT LY KTG + + NLF M KD+ISWSSM+ CYA
Sbjct: 226 GRSVHGFVKRRGFDTKLCLANSILNLYGKTGSIRSAANLFREMPYKDIISWSSMVACYAD 285
Query: 88 NGKTTQALEVFNEMVENRFEPNSITVVSA 2
NG T AL +FNEM++ R E N +TV+SA
Sbjct: 286 NGAETNALNLFNEMIDKRIELNRVTVISA 314
Score = 56.2 bits (134), Expect = 3e-06
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Frame = -1
Query: 259 VHGFIIRMGLDTXXXXXXXXXXLYAKTGCVGTTKNLFCAMNEKDVISWSSMIGCYAHNGK 80
+H F+ + G D LYAK + +F M KDV++WSS+I Y +G+
Sbjct: 431 LHAFVSKSGFDNNEFIGASLIELYAKCSSIDNANKVFKGMRRKDVVTWSSIIAAYGFHGQ 490
Query: 79 TTQALEVFNEMVENR-FEPNSITVVS 5
+AL++F +M + +PN +T VS
Sbjct: 491 GEEALKLFYQMSNHSDVKPNDVTFVS 516
>ref|XP_003604673.1| hypothetical protein MTR_4g015760 [Medicago truncatula]
gi|355505728|gb|AES86870.1| hypothetical protein
MTR_4g015760 [Medicago truncatula]
Length = 838
Score = 95.5 bits (236), Expect = 4e-18
Identities = 44/88 (50%), Positives = 58/88 (65%)
Frame = -1
Query: 268 GKSVHGFIIRMGLDTXXXXXXXXXXLYAKTGCVGTTKNLFCAMNEKDVISWSSMIGCYAH 89
G+SVHGF+ R GLD LY KTG + NLF M++KD+ISWS+M+ CYA
Sbjct: 363 GRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMVACYAD 422
Query: 88 NGKTTQALEVFNEMVENRFEPNSITVVS 5
NG T L++FNEM++ R +PN +TVVS
Sbjct: 423 NGAETDVLDLFNEMLDKRIKPNWVTVVS 450
Score = 55.5 bits (132), Expect = 5e-06
Identities = 26/86 (30%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Frame = -1
Query: 259 VHGFIIRMGLDTXXXXXXXXXXLYAKTGCVGTTKNLFCAMNEKDVISWSSMIGCYAHNGK 80
+H F+I+ G + +YAK + +F M KDV++WSS+I Y +G+
Sbjct: 568 LHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFHGQ 627
Query: 79 TTQALEVFNEMVENR-FEPNSITVVS 5
+AL++F +M + +PN++T +S
Sbjct: 628 GEEALKLFYQMANHSDTKPNNVTFIS 653
>ref|XP_003525738.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g01580-like [Glycine max]
Length = 701
Score = 94.7 bits (234), Expect = 7e-18
Identities = 46/89 (51%), Positives = 56/89 (62%)
Frame = -1
Query: 268 GKSVHGFIIRMGLDTXXXXXXXXXXLYAKTGCVGTTKNLFCAMNEKDVISWSSMIGCYAH 89
G+SVHGF+ R G DT LY KTG + NLF M KD+ISWSSM+ CYA
Sbjct: 225 GRSVHGFVKRRGFDTKLCLANSILNLYGKTGSIRIAANLFREMPYKDIISWSSMVACYAD 284
Query: 88 NGKTTQALEVFNEMVENRFEPNSITVVSA 2
NG T AL +FNEM++ R E N +TV+SA
Sbjct: 285 NGAETNALNLFNEMIDKRIELNRVTVISA 313
>emb|CBI34855.3| unnamed protein product [Vitis vinifera]
Length = 956
Score = 88.2 bits (217), Expect = 6e-16
Identities = 41/63 (65%), Positives = 48/63 (76%)
Frame = -1
Query: 190 YAKTGCVGTTKNLFCAMNEKDVISWSSMIGCYAHNGKTTQALEVFNEMVENRFEPNSITV 11
YAKTGC NLF M EKDVISWS+MI CYA+N +AL +F+EM+E RFEPNS+TV
Sbjct: 216 YAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTV 275
Query: 10 VSA 2
VSA
Sbjct: 276 VSA 278
Score = 58.5 bits (140), Expect = 5e-07
Identities = 26/73 (35%), Positives = 44/73 (60%)
Frame = -1
Query: 259 VHGFIIRMGLDTXXXXXXXXXXLYAKTGCVGTTKNLFCAMNEKDVISWSSMIGCYAHNGK 80
+HG+++R G ++ LY+K G +G LF M +DV+ WSSMI Y +G+
Sbjct: 360 LHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGR 419
Query: 79 TTQALEVFNEMVE 41
+ALE+F++M++
Sbjct: 420 GGEALEIFDQMIQ 432