BLASTX nr result

ID: Cimicifuga21_contig00033590 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00033590
         (275 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN82657.1| hypothetical protein VITISV_042745 [Vitis vinifera]    41   5e-06
ref|YP_001312259.1| hypothetical protein CYtaCp094 [Cycas taitun...    41   5e-06

>emb|CAN82657.1| hypothetical protein VITISV_042745 [Vitis vinifera]
          Length = 120

 Score = 41.2 bits (95), Expect(2) = 5e-06
 Identities = 16/22 (72%), Positives = 17/22 (77%)
 Frame = -2

Query: 235 PTFYRGHDNWYTIGVSFSVFSY 170
           P+ YRGHDNWYT G SF V SY
Sbjct: 99  PSVYRGHDNWYTRGASFPVLSY 120



 Score = 33.9 bits (76), Expect(2) = 5e-06
 Identities = 13/16 (81%), Positives = 15/16 (93%)
 Frame = -1

Query: 275 LDAFDNYPLRTWLPNV 228
           LDAF +YPLRTWLP+V
Sbjct: 86  LDAFSSYPLRTWLPSV 101


>ref|YP_001312259.1| hypothetical protein CYtaCp094 [Cycas taitungensis]
           gi|150251547|ref|YP_001312279.1| hypothetical protein
           CYtaCp114 [Cycas taitungensis]
           gi|452848924|ref|YP_007474602.1| hypothetical_protein
           (chloroplast) [Cycas revoluta]
           gi|452849011|ref|YP_007474690.1| hypothetical_protein
           (chloroplast) [Cycas revoluta]
           gi|149941577|dbj|BAF65001.1| hypothetical protein
           (chloroplast) [Cycas taitungensis]
           gi|149941597|dbj|BAF65021.1| hypothetical protein
           (chloroplast) [Cycas taitungensis]
           gi|372863079|gb|AEX99152.1| hypothetical_protein
           (chloroplast) [Cycas revoluta]
           gi|372863166|gb|AEX99239.1| hypothetical_protein
           (chloroplast) [Cycas revoluta]
          Length = 107

 Score = 41.2 bits (95), Expect(2) = 5e-06
 Identities = 16/22 (72%), Positives = 17/22 (77%)
 Frame = -2

Query: 235 PTFYRGHDNWYTIGVSFSVFSY 170
           P+ YRGHDNWYT G SF V SY
Sbjct: 86  PSVYRGHDNWYTRGASFPVLSY 107



 Score = 33.9 bits (76), Expect(2) = 5e-06
 Identities = 13/16 (81%), Positives = 15/16 (93%)
 Frame = -1

Query: 275 LDAFDNYPLRTWLPNV 228
           LDAF +YPLRTWLP+V
Sbjct: 73  LDAFSSYPLRTWLPSV 88


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