BLASTX nr result

ID: Cimicifuga21_contig00033571 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00033571
         (321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269707.2| PREDICTED: putative E3 ubiquitin-protein lig...    94   9e-18
emb|CAN65866.1| hypothetical protein VITISV_010257 [Vitis vinifera]    94   9e-18
ref|XP_003534844.1| PREDICTED: uncharacterized protein LOC100789...    89   5e-16
ref|XP_002516937.1| nucleotide binding protein, putative [Ricinu...    88   8e-16
ref|XP_003547380.1| PREDICTED: uncharacterized protein LOC100782...    84   9e-15

>ref|XP_002269707.2| PREDICTED: putative E3 ubiquitin-protein ligase LIN-1-like [Vitis
           vinifera]
          Length = 1339

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 47/106 (44%), Positives = 72/106 (67%), Gaps = 2/106 (1%)
 Frame = +3

Query: 3   QRDDWQVTLNFLHAMLVNPRLVRTEFMPELWESVFLPQIMSRMEESGLRDVQSETLVDFF 182
           QRD+WQV L+FL A++V+PRL++TEF P L E++FL   +S  +  G R  +S +L++  
Sbjct: 141 QRDEWQVALHFLQALMVSPRLIQTEFAPGLCENLFLTHSISERQNVGGRSFRSVSLMNSD 200

Query: 183 DNEFDDATRQLTRRYKDSLMYYQVMLYGETPQ--WNWGDRVAPLGE 314
           + +  +A R+  +RYK  LMYYQVM YGETPQ    + D ++P+ +
Sbjct: 201 EGKPGEAIRETAKRYKSWLMYYQVMQYGETPQRPGGYNDILSPVDQ 246


>emb|CAN65866.1| hypothetical protein VITISV_010257 [Vitis vinifera]
          Length = 1378

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 47/106 (44%), Positives = 72/106 (67%), Gaps = 2/106 (1%)
 Frame = +3

Query: 3   QRDDWQVTLNFLHAMLVNPRLVRTEFMPELWESVFLPQIMSRMEESGLRDVQSETLVDFF 182
           QRD+WQV L+FL A++V+PRL++TEF P L E++FL   +S  +  G R  +S +L++  
Sbjct: 141 QRDEWQVALHFLQALMVSPRLIQTEFAPGLCENLFLTHSISERQNVGGRSFRSVSLMNSD 200

Query: 183 DNEFDDATRQLTRRYKDSLMYYQVMLYGETPQ--WNWGDRVAPLGE 314
           + +  +A R+  +RYK  LMYYQVM YGETPQ    + D ++P+ +
Sbjct: 201 EGKPGEAIRETAKRYKSWLMYYQVMQYGETPQRPGGYNDILSPVDQ 246


>ref|XP_003534844.1| PREDICTED: uncharacterized protein LOC100789287 [Glycine max]
          Length = 1362

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 46/94 (48%), Positives = 64/94 (68%), Gaps = 1/94 (1%)
 Frame = +3

Query: 3   QRDDWQVTLNFLHAMLVNPRLVRTEFMPELWESVFLPQIMSRMEE-SGLRDVQSETLVDF 179
           Q D+WQ  L+FL A+LV+P+LV TEF  +L ES+F    ++ M+  S  R ++S +  D 
Sbjct: 122 QGDEWQAVLHFLQAVLVSPKLVWTEFASQLCESLFPQSSITMMQRNSSTRSLESVSSED- 180

Query: 180 FDNEFDDATRQLTRRYKDSLMYYQVMLYGETPQW 281
              E D+A R++ RRYK+ L+YYQVMLYGETP W
Sbjct: 181 ---EMDEAIREVARRYKECLVYYQVMLYGETPWW 211


>ref|XP_002516937.1| nucleotide binding protein, putative [Ricinus communis]
           gi|223544025|gb|EEF45551.1| nucleotide binding protein,
           putative [Ricinus communis]
          Length = 1357

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 48/102 (47%), Positives = 63/102 (61%), Gaps = 8/102 (7%)
 Frame = +3

Query: 3   QRDDWQVTLNFLHAMLVNPRLVRTEFMPELWESVFLPQIMSRMEESGLRDVQS------- 161
           Q D+WQV L+FL AMLV+PR VR E  PE   S+F          SG+ +V++       
Sbjct: 140 QNDEWQVALHFLQAMLVSPRFVRAELAPEFCASLF--------PVSGVLEVETMCGKKGK 191

Query: 162 ETLVDFFDN-EFDDATRQLTRRYKDSLMYYQVMLYGETPQWN 284
           E++ DF +    +DA R++ RRYK  L YYQVMLYGETPQW+
Sbjct: 192 ESVTDFLNEANINDAIREIARRYKHWLTYYQVMLYGETPQWH 233


>ref|XP_003547380.1| PREDICTED: uncharacterized protein LOC100782870 [Glycine max]
          Length = 1302

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 44/94 (46%), Positives = 64/94 (68%), Gaps = 1/94 (1%)
 Frame = +3

Query: 3   QRDDWQVTLNFLHAMLVNPRLVRTEFMPELWESVFLPQIMSRMEE-SGLRDVQSETLVDF 179
           Q D+WQ  L+FL A+LV+P+LV TEF  +L ES+F    ++ M+  S  R ++S +  D 
Sbjct: 122 QGDEWQAALHFLQAVLVSPKLVWTEFASQLCESLFPQSGITMMQRNSSSRSLESVSSED- 180

Query: 180 FDNEFDDATRQLTRRYKDSLMYYQVMLYGETPQW 281
              E D+A +++ R+YK+ L+YYQVMLYGETP W
Sbjct: 181 ---EMDEAIKEVARKYKEWLVYYQVMLYGETPWW 211


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