BLASTX nr result

ID: Cimicifuga21_contig00033562 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00033562
         (271 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513668.1| ribosomal protein S9, putative [Ricinus comm...    62   4e-08
ref|XP_002318804.1| predicted protein [Populus trichocarpa] gi|2...    62   4e-08
gb|AFG60145.1| Pinus taeda anonymous locus CL3672Contig1_01 geno...    62   6e-08
gb|AEW09083.1| Pinus taeda anonymous locus CL3672Contig1_01 geno...    62   6e-08
ref|XP_002274146.1| PREDICTED: 28S ribosomal protein S9, mitocho...    61   8e-08

>ref|XP_002513668.1| ribosomal protein S9, putative [Ricinus communis]
           gi|223547576|gb|EEF49071.1| ribosomal protein S9,
           putative [Ricinus communis]
          Length = 398

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 28/29 (96%), Positives = 29/29 (100%)
 Frame = -3

Query: 269 GFLTRDPRMVERKKPGKAKARKSFQWVKR 183
           GFLTRDPR+VERKKPGKAKARKSFQWVKR
Sbjct: 370 GFLTRDPRVVERKKPGKAKARKSFQWVKR 398


>ref|XP_002318804.1| predicted protein [Populus trichocarpa] gi|222859477|gb|EEE97024.1|
           predicted protein [Populus trichocarpa]
          Length = 186

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 28/29 (96%), Positives = 29/29 (100%)
 Frame = -3

Query: 269 GFLTRDPRMVERKKPGKAKARKSFQWVKR 183
           GFLTRDPR+VERKKPGKAKARKSFQWVKR
Sbjct: 158 GFLTRDPRVVERKKPGKAKARKSFQWVKR 186


>gb|AFG60145.1| Pinus taeda anonymous locus CL3672Contig1_01 genomic sequence
           gi|383155880|gb|AFG60150.1| Pinus taeda anonymous locus
           CL3672Contig1_01 genomic sequence
          Length = 52

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 28/29 (96%), Positives = 28/29 (96%)
 Frame = -3

Query: 269 GFLTRDPRMVERKKPGKAKARKSFQWVKR 183
           G LTRDPRMVERKKPGKAKARKSFQWVKR
Sbjct: 24  GLLTRDPRMVERKKPGKAKARKSFQWVKR 52


>gb|AEW09083.1| Pinus taeda anonymous locus CL3672Contig1_01 genomic sequence
           gi|361069545|gb|AEW09084.1| Pinus taeda anonymous locus
           CL3672Contig1_01 genomic sequence
           gi|376339646|gb|AFB34339.1| hypothetical protein
           CL3672Contig1_01, partial [Pinus cembra]
           gi|376339648|gb|AFB34340.1| hypothetical protein
           CL3672Contig1_01, partial [Pinus cembra]
           gi|376339650|gb|AFB34341.1| hypothetical protein
           CL3672Contig1_01, partial [Pinus cembra]
           gi|376339652|gb|AFB34342.1| hypothetical protein
           CL3672Contig1_01, partial [Pinus cembra]
           gi|376339654|gb|AFB34343.1| hypothetical protein
           CL3672Contig1_01, partial [Pinus cembra]
           gi|376339656|gb|AFB34344.1| hypothetical protein
           CL3672Contig1_01, partial [Pinus mugo]
           gi|376339658|gb|AFB34345.1| hypothetical protein
           CL3672Contig1_01, partial [Pinus mugo]
           gi|376339660|gb|AFB34346.1| hypothetical protein
           CL3672Contig1_01, partial [Pinus mugo]
           gi|383155854|gb|AFG60137.1| Pinus taeda anonymous locus
           CL3672Contig1_01 genomic sequence
           gi|383155856|gb|AFG60138.1| Pinus taeda anonymous locus
           CL3672Contig1_01 genomic sequence
           gi|383155858|gb|AFG60139.1| Pinus taeda anonymous locus
           CL3672Contig1_01 genomic sequence
           gi|383155860|gb|AFG60140.1| Pinus taeda anonymous locus
           CL3672Contig1_01 genomic sequence
           gi|383155862|gb|AFG60141.1| Pinus taeda anonymous locus
           CL3672Contig1_01 genomic sequence
           gi|383155864|gb|AFG60142.1| Pinus taeda anonymous locus
           CL3672Contig1_01 genomic sequence
           gi|383155866|gb|AFG60143.1| Pinus taeda anonymous locus
           CL3672Contig1_01 genomic sequence
           gi|383155868|gb|AFG60144.1| Pinus taeda anonymous locus
           CL3672Contig1_01 genomic sequence
           gi|383155872|gb|AFG60146.1| Pinus taeda anonymous locus
           CL3672Contig1_01 genomic sequence
           gi|383155874|gb|AFG60147.1| Pinus taeda anonymous locus
           CL3672Contig1_01 genomic sequence
           gi|383155876|gb|AFG60148.1| Pinus taeda anonymous locus
           CL3672Contig1_01 genomic sequence
           gi|383155878|gb|AFG60149.1| Pinus taeda anonymous locus
           CL3672Contig1_01 genomic sequence
           gi|383155882|gb|AFG60151.1| Pinus taeda anonymous locus
           CL3672Contig1_01 genomic sequence
          Length = 52

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 28/29 (96%), Positives = 28/29 (96%)
 Frame = -3

Query: 269 GFLTRDPRMVERKKPGKAKARKSFQWVKR 183
           G LTRDPRMVERKKPGKAKARKSFQWVKR
Sbjct: 24  GLLTRDPRMVERKKPGKAKARKSFQWVKR 52


>ref|XP_002274146.1| PREDICTED: 28S ribosomal protein S9, mitochondrial [Vitis vinifera]
           gi|147846771|emb|CAN80622.1| hypothetical protein
           VITISV_043432 [Vitis vinifera]
           gi|296084909|emb|CBI28318.3| unnamed protein product
           [Vitis vinifera]
          Length = 357

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 27/29 (93%), Positives = 29/29 (100%)
 Frame = -3

Query: 269 GFLTRDPRMVERKKPGKAKARKSFQWVKR 183
           GFLTRDPR+VERKKPGKAKARKS+QWVKR
Sbjct: 329 GFLTRDPRVVERKKPGKAKARKSYQWVKR 357


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