BLASTX nr result
ID: Cimicifuga21_contig00033554
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00033554 (377 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003638494.1| Pectate lyase, partial [Medicago truncatula]... 119 2e-25 gb|ACJ83349.1| unknown [Medicago truncatula] 117 7e-25 ref|XP_002297822.1| predicted protein [Populus trichocarpa] gi|1... 115 5e-24 gb|ACB12931.1| pectate lyase 1-27 [Populus tremula x Populus tre... 114 8e-24 gb|AFZ78654.1| pectate lyase [Populus tomentosa] 114 1e-23 >ref|XP_003638494.1| Pectate lyase, partial [Medicago truncatula] gi|355504429|gb|AES85632.1| Pectate lyase, partial [Medicago truncatula] Length = 194 Score = 119 bits (299), Expect = 2e-25 Identities = 56/84 (66%), Positives = 67/84 (79%), Gaps = 1/84 (1%) Frame = +3 Query: 129 SLVSRVE-ETEQMQSFNNSSMAGRLEEAEARNKNATVLDPERIVSMVEMDIHNSTQRRNL 305 S S VE ET ++ SFN+SSMA R ++AE N+ A V +P+ + SMVEM I NST+RRNL Sbjct: 34 SQFSNVETETHRLPSFNDSSMAAREKQAEKLNERAAVANPKEVASMVEMHIQNSTERRNL 93 Query: 306 GFFSCGTGNPIDDCWRCDRNWQKN 377 GFFSCGTGNPIDDCWRCDRNWQ+N Sbjct: 94 GFFSCGTGNPIDDCWRCDRNWQQN 117 >gb|ACJ83349.1| unknown [Medicago truncatula] Length = 206 Score = 117 bits (294), Expect = 7e-25 Identities = 55/84 (65%), Positives = 67/84 (79%), Gaps = 1/84 (1%) Frame = +3 Query: 129 SLVSRVE-ETEQMQSFNNSSMAGRLEEAEARNKNATVLDPERIVSMVEMDIHNSTQRRNL 305 S S VE ET ++ SFN+SSMA R ++AE N+ A V +P+ + SMVEM I NST+RR+L Sbjct: 34 SQFSNVETETHRLPSFNDSSMAAREKQAEKLNERAAVANPKEVASMVEMHIQNSTERRDL 93 Query: 306 GFFSCGTGNPIDDCWRCDRNWQKN 377 GFFSCGTGNPIDDCWRCDRNWQ+N Sbjct: 94 GFFSCGTGNPIDDCWRCDRNWQQN 117 >ref|XP_002297822.1| predicted protein [Populus trichocarpa] gi|118488789|gb|ABK96205.1| unknown [Populus trichocarpa] gi|222845080|gb|EEE82627.1| predicted protein [Populus trichocarpa] Length = 450 Score = 115 bits (287), Expect = 5e-24 Identities = 54/84 (64%), Positives = 67/84 (79%), Gaps = 1/84 (1%) Frame = +3 Query: 129 SLVSRVEETEQMQSFNNSSMAGRL-EEAEARNKNATVLDPERIVSMVEMDIHNSTQRRNL 305 S ++R ETE++QS +N++MA R EEA+A N+ A +PE +VSMVEM I NST+RR L Sbjct: 34 SALTRSVETEKVQSSSNTTMAARSQEEADALNEKAVADNPEEVVSMVEMSIRNSTERRRL 93 Query: 306 GFFSCGTGNPIDDCWRCDRNWQKN 377 G+FSCGTGNPIDDCWRCD NWQKN Sbjct: 94 GYFSCGTGNPIDDCWRCDPNWQKN 117 >gb|ACB12931.1| pectate lyase 1-27 [Populus tremula x Populus tremuloides] Length = 452 Score = 114 bits (285), Expect = 8e-24 Identities = 54/84 (64%), Positives = 65/84 (77%), Gaps = 1/84 (1%) Frame = +3 Query: 129 SLVSRVEETEQMQSFNNSSMAGRL-EEAEARNKNATVLDPERIVSMVEMDIHNSTQRRNL 305 S ++R E E+ QS +NS+MA R EEA+A N+ A DPE +VSMVEM+I NST+RR L Sbjct: 36 SALTRNVEAEKEQSSSNSTMAARSQEEADALNEKAVAADPEEVVSMVEMNIRNSTERRRL 95 Query: 306 GFFSCGTGNPIDDCWRCDRNWQKN 377 G+FSCGTGNPIDDCWRCD NW KN Sbjct: 96 GYFSCGTGNPIDDCWRCDPNWHKN 119 >gb|AFZ78654.1| pectate lyase [Populus tomentosa] Length = 452 Score = 114 bits (284), Expect = 1e-23 Identities = 54/84 (64%), Positives = 65/84 (77%), Gaps = 1/84 (1%) Frame = +3 Query: 129 SLVSRVEETEQMQSFNNSSMAGRL-EEAEARNKNATVLDPERIVSMVEMDIHNSTQRRNL 305 S ++R E E+ QS +NS+MA R EEA+A N+ A DPE +VSMVEM+I NST+RR L Sbjct: 36 SALTRNVEAEKEQSSSNSTMAARSQEEADAFNEKAVAADPEEVVSMVEMNIRNSTERRRL 95 Query: 306 GFFSCGTGNPIDDCWRCDRNWQKN 377 G+FSCGTGNPIDDCWRCD NW KN Sbjct: 96 GYFSCGTGNPIDDCWRCDPNWHKN 119