BLASTX nr result

ID: Cimicifuga21_contig00033554 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00033554
         (377 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003638494.1| Pectate lyase, partial [Medicago truncatula]...   119   2e-25
gb|ACJ83349.1| unknown [Medicago truncatula]                          117   7e-25
ref|XP_002297822.1| predicted protein [Populus trichocarpa] gi|1...   115   5e-24
gb|ACB12931.1| pectate lyase 1-27 [Populus tremula x Populus tre...   114   8e-24
gb|AFZ78654.1| pectate lyase [Populus tomentosa]                      114   1e-23

>ref|XP_003638494.1| Pectate lyase, partial [Medicago truncatula]
           gi|355504429|gb|AES85632.1| Pectate lyase, partial
           [Medicago truncatula]
          Length = 194

 Score =  119 bits (299), Expect = 2e-25
 Identities = 56/84 (66%), Positives = 67/84 (79%), Gaps = 1/84 (1%)
 Frame = +3

Query: 129 SLVSRVE-ETEQMQSFNNSSMAGRLEEAEARNKNATVLDPERIVSMVEMDIHNSTQRRNL 305
           S  S VE ET ++ SFN+SSMA R ++AE  N+ A V +P+ + SMVEM I NST+RRNL
Sbjct: 34  SQFSNVETETHRLPSFNDSSMAAREKQAEKLNERAAVANPKEVASMVEMHIQNSTERRNL 93

Query: 306 GFFSCGTGNPIDDCWRCDRNWQKN 377
           GFFSCGTGNPIDDCWRCDRNWQ+N
Sbjct: 94  GFFSCGTGNPIDDCWRCDRNWQQN 117


>gb|ACJ83349.1| unknown [Medicago truncatula]
          Length = 206

 Score =  117 bits (294), Expect = 7e-25
 Identities = 55/84 (65%), Positives = 67/84 (79%), Gaps = 1/84 (1%)
 Frame = +3

Query: 129 SLVSRVE-ETEQMQSFNNSSMAGRLEEAEARNKNATVLDPERIVSMVEMDIHNSTQRRNL 305
           S  S VE ET ++ SFN+SSMA R ++AE  N+ A V +P+ + SMVEM I NST+RR+L
Sbjct: 34  SQFSNVETETHRLPSFNDSSMAAREKQAEKLNERAAVANPKEVASMVEMHIQNSTERRDL 93

Query: 306 GFFSCGTGNPIDDCWRCDRNWQKN 377
           GFFSCGTGNPIDDCWRCDRNWQ+N
Sbjct: 94  GFFSCGTGNPIDDCWRCDRNWQQN 117


>ref|XP_002297822.1| predicted protein [Populus trichocarpa] gi|118488789|gb|ABK96205.1|
           unknown [Populus trichocarpa]
           gi|222845080|gb|EEE82627.1| predicted protein [Populus
           trichocarpa]
          Length = 450

 Score =  115 bits (287), Expect = 5e-24
 Identities = 54/84 (64%), Positives = 67/84 (79%), Gaps = 1/84 (1%)
 Frame = +3

Query: 129 SLVSRVEETEQMQSFNNSSMAGRL-EEAEARNKNATVLDPERIVSMVEMDIHNSTQRRNL 305
           S ++R  ETE++QS +N++MA R  EEA+A N+ A   +PE +VSMVEM I NST+RR L
Sbjct: 34  SALTRSVETEKVQSSSNTTMAARSQEEADALNEKAVADNPEEVVSMVEMSIRNSTERRRL 93

Query: 306 GFFSCGTGNPIDDCWRCDRNWQKN 377
           G+FSCGTGNPIDDCWRCD NWQKN
Sbjct: 94  GYFSCGTGNPIDDCWRCDPNWQKN 117


>gb|ACB12931.1| pectate lyase 1-27 [Populus tremula x Populus tremuloides]
          Length = 452

 Score =  114 bits (285), Expect = 8e-24
 Identities = 54/84 (64%), Positives = 65/84 (77%), Gaps = 1/84 (1%)
 Frame = +3

Query: 129 SLVSRVEETEQMQSFNNSSMAGRL-EEAEARNKNATVLDPERIVSMVEMDIHNSTQRRNL 305
           S ++R  E E+ QS +NS+MA R  EEA+A N+ A   DPE +VSMVEM+I NST+RR L
Sbjct: 36  SALTRNVEAEKEQSSSNSTMAARSQEEADALNEKAVAADPEEVVSMVEMNIRNSTERRRL 95

Query: 306 GFFSCGTGNPIDDCWRCDRNWQKN 377
           G+FSCGTGNPIDDCWRCD NW KN
Sbjct: 96  GYFSCGTGNPIDDCWRCDPNWHKN 119


>gb|AFZ78654.1| pectate lyase [Populus tomentosa]
          Length = 452

 Score =  114 bits (284), Expect = 1e-23
 Identities = 54/84 (64%), Positives = 65/84 (77%), Gaps = 1/84 (1%)
 Frame = +3

Query: 129 SLVSRVEETEQMQSFNNSSMAGRL-EEAEARNKNATVLDPERIVSMVEMDIHNSTQRRNL 305
           S ++R  E E+ QS +NS+MA R  EEA+A N+ A   DPE +VSMVEM+I NST+RR L
Sbjct: 36  SALTRNVEAEKEQSSSNSTMAARSQEEADAFNEKAVAADPEEVVSMVEMNIRNSTERRRL 95

Query: 306 GFFSCGTGNPIDDCWRCDRNWQKN 377
           G+FSCGTGNPIDDCWRCD NW KN
Sbjct: 96  GYFSCGTGNPIDDCWRCDPNWHKN 119


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