BLASTX nr result

ID: Cimicifuga21_contig00033505 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00033505
         (281 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310281.1| short internodes 1 [Populus trichocarpa] gi|...   105   4e-21
ref|XP_002327777.1| short internodes 2 [Populus trichocarpa] gi|...   105   5e-21
ref|XP_003548866.1| PREDICTED: uncharacterized protein LOC100781...   104   6e-21
gb|ABL63114.1| DNA-binding protein [Catharanthus roseus]              104   8e-21
ref|XP_003538866.1| PREDICTED: uncharacterized protein LOC100797...   103   1e-20

>ref|XP_002310281.1| short internodes 1 [Populus trichocarpa]
           gi|222853184|gb|EEE90731.1| short internodes 1 [Populus
           trichocarpa]
          Length = 229

 Score =  105 bits (262), Expect = 4e-21
 Identities = 54/82 (65%), Positives = 55/82 (67%), Gaps = 4/82 (4%)
 Frame = -3

Query: 273 STSCQDCGNQAKKDCEHMRCRTCCKSRGFPCQTHVKSTWVPASRRRERXXXXXXXXXXXX 94
           S SCQDCGNQAKKDC HMRCRTCCKSRGF CQTHVKSTWVPAS+RRER            
Sbjct: 118 SISCQDCGNQAKKDCIHMRCRTCCKSRGFECQTHVKSTWVPASKRRERQQQLNLLQQQQQ 177

Query: 93  XXQRVVETTKRPREN----LAC 40
              R  E  KR REN    LAC
Sbjct: 178 LQIR-GENPKRQRENPSSSLAC 198


>ref|XP_002327777.1| short internodes 2 [Populus trichocarpa]
           gi|222836862|gb|EEE75255.1| short internodes 2 [Populus
           trichocarpa]
          Length = 344

 Score =  105 bits (261), Expect = 5e-21
 Identities = 53/84 (63%), Positives = 56/84 (66%), Gaps = 6/84 (7%)
 Frame = -3

Query: 273 STSCQDCGNQAKKDCEHMRCRTCCKSRGFPCQTHVKSTWVPASRRRERXXXXXXXXXXXX 94
           S SCQDCGNQAKKDC HMRCRTCCKSRGF CQTHVKSTWVPAS+RRER            
Sbjct: 120 SISCQDCGNQAKKDCVHMRCRTCCKSRGFECQTHVKSTWVPASKRRERQHQLTIFQQQQQ 179

Query: 93  XXQRV-VETTKRPREN-----LAC 40
              ++  E  KR REN     LAC
Sbjct: 180 QQLQIRGENPKRQRENPSPSSLAC 203


>ref|XP_003548866.1| PREDICTED: uncharacterized protein LOC100781981 [Glycine max]
          Length = 361

 Score =  104 bits (260), Expect = 6e-21
 Identities = 47/73 (64%), Positives = 54/73 (73%)
 Frame = -3

Query: 267 SCQDCGNQAKKDCEHMRCRTCCKSRGFPCQTHVKSTWVPASRRRERXXXXXXXXXXXXXX 88
           SCQDCGNQAKKDC HMRCRTCCKSRG+ CQTHVKSTWVPAS+RRER              
Sbjct: 160 SCQDCGNQAKKDCPHMRCRTCCKSRGYDCQTHVKSTWVPASKRRERQQQLMALHQQQQEQ 219

Query: 87  QRVVETTKRPREN 49
           Q+  + +KRPR++
Sbjct: 220 QQQRDISKRPRDS 232


>gb|ABL63114.1| DNA-binding protein [Catharanthus roseus]
          Length = 367

 Score =  104 bits (259), Expect = 8e-21
 Identities = 51/80 (63%), Positives = 57/80 (71%), Gaps = 4/80 (5%)
 Frame = -3

Query: 267 SCQDCGNQAKKDCEHMRCRTCCKSRGFPCQTHVKSTWVPASRRRERXXXXXXXXXXXXXX 88
           +CQDCGNQAKKDC H+RCRTCCKSRGF CQTHVKSTWVPA++RRER              
Sbjct: 136 NCQDCGNQAKKDCTHLRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQQQLASSSLQQNQ 195

Query: 87  QRV-VETTKRPREN---LAC 40
           Q +  E +KRPREN   LAC
Sbjct: 196 QHLRGENSKRPRENPSSLAC 215


>ref|XP_003538866.1| PREDICTED: uncharacterized protein LOC100797973 [Glycine max]
          Length = 334

 Score =  103 bits (258), Expect = 1e-20
 Identities = 44/46 (95%), Positives = 44/46 (95%)
 Frame = -3

Query: 267 SCQDCGNQAKKDCEHMRCRTCCKSRGFPCQTHVKSTWVPASRRRER 130
           SCQDCGNQAKKDC HMRCRTCCKSRGF CQTHVKSTWVPASRRRER
Sbjct: 115 SCQDCGNQAKKDCPHMRCRTCCKSRGFDCQTHVKSTWVPASRRRER 160


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