BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00033504
         (271 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAD41785.1| OSJNBa0035M09.1 [Oryza sativa Japonica Group] gi...    56   2e-07
gb|AAM08546.1|AC079935_18 Putative retroelement [Oryza sativa Ja...    55   3e-07
gb|ABA94477.1| retrotransposon protein, putative, unclassified [...    55   3e-07
emb|CAN74986.1| hypothetical protein VITISV_008771 [Vitis vinifera]    49   2e-06
emb|CAN71070.1| hypothetical protein VITISV_000084 [Vitis vinifera]    48   2e-06

>emb|CAD41785.1| OSJNBa0035M09.1 [Oryza sativa Japonica Group]
           gi|38346911|emb|CAE03883.2| OSJNBb0015N08.11 [Oryza
           sativa Japonica Group]
          Length = 1026

 Score = 55.8 bits (133), Expect(2) = 2e-07
 Identities = 29/66 (43%), Positives = 43/66 (65%)
 Frame = +1

Query: 73  EALTRMVLKAQGNNLLQGFGMAPGCDPIPILQYADDTLIMIETNQDQVRNLRAVLLWSEA 252
           EALT +V +A+ N+L++G G   G + I ILQYADDT+ +I    D  +NL+ +L   E 
Sbjct: 457 EALTLLVQRAEENSLIEGLG-TNGDNKIAILQYADDTIFLINDKLDHAKNLKYILCLFEQ 515

Query: 253 VSGLNV 270
           +SGL +
Sbjct: 516 LSGLKI 521



 Score = 24.3 bits (51), Expect(2) = 2e-07
 Identities = 9/14 (64%), Positives = 12/14 (85%)
 Frame = +2

Query: 2   YFKSSRGLRQEDPL 43
           +FK+ +GLRQ DPL
Sbjct: 434 FFKTHKGLRQGDPL 447


>gb|AAM08546.1|AC079935_18 Putative retroelement [Oryza sativa Japonica Group]
           gi|31431697|gb|AAP53436.1| retrotransposon protein,
           putative, unclassified [Oryza sativa Japonica Group]
          Length = 586

 Score = 55.5 bits (132), Expect(2) = 3e-07
 Identities = 28/66 (42%), Positives = 45/66 (68%)
 Frame = +1

Query: 73  EALTRMVLKAQGNNLLQGFGMAPGCDPIPILQYADDTLIMIETNQDQVRNLRAVLLWSEA 252
           EALT +V +A+ N+L++G  +    + + ILQYADDT+ MI+ + +Q RNL+ +L   E 
Sbjct: 237 EALTLLVQRAENNSLVEGLPINEN-NKVTILQYADDTIFMIKDDPEQARNLKFILCLFEQ 295

Query: 253 VSGLNV 270
           +SGL +
Sbjct: 296 LSGLKI 301



 Score = 23.9 bits (50), Expect(2) = 3e-07
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +2

Query: 2   YFKSSRGLRQEDPL 43
           YF + +GLRQ DPL
Sbjct: 214 YFNTHKGLRQGDPL 227


>gb|ABA94477.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1015

 Score = 55.1 bits (131), Expect(2) = 3e-07
 Identities = 27/66 (40%), Positives = 45/66 (68%)
 Frame = +1

Query: 73   EALTRMVLKAQGNNLLQGFGMAPGCDPIPILQYADDTLIMIETNQDQVRNLRAVLLWSEA 252
            E LT +V +A+ ++LL+G  ++   + + IL+YADDT+ MI+ N +Q RNL+ +L   E 
Sbjct: 830  ETLTLLVQRAESSSLLEGLSVSEN-NKVTILKYADDTIFMIKDNVEQARNLKFILCLFEQ 888

Query: 253  VSGLNV 270
            +SGL +
Sbjct: 889  LSGLKI 894



 Score = 23.9 bits (50), Expect(2) = 3e-07
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +2

Query: 2   YFKSSRGLRQEDPL 43
           YF + +GLRQ DPL
Sbjct: 807 YFNTHKGLRQGDPL 820


>emb|CAN74986.1| hypothetical protein VITISV_008771 [Vitis vinifera]
          Length = 1971

 Score = 48.5 bits (114), Expect(2) = 2e-06
 Identities = 26/69 (37%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
 Frame = +1

Query: 73   EALTRMVLKAQGNNLLQGF---GMAPGCDPIPILQYADDTLIMIETNQDQVRNLRAVLLW 243
            EAL+R++ +A G   L G    G       +  L +ADDTL+  E ++DQ+ +L  +L+W
Sbjct: 959  EALSRLIHRAVGGGFLSGCRVNGRGGNGALVSHLLFADDTLVFCEASEDQMVHLSWLLMW 1018

Query: 244  SEAVSGLNV 270
             EA+SGL +
Sbjct: 1019 FEAISGLRI 1027



 Score = 28.1 bits (61), Expect(2) = 2e-06
 Identities = 12/14 (85%), Positives = 12/14 (85%)
 Frame = +2

Query: 2   YFKSSRGLRQEDPL 43
           YF SSRGLRQ DPL
Sbjct: 936 YFNSSRGLRQGDPL 949


>emb|CAN71070.1| hypothetical protein VITISV_000084 [Vitis vinifera]
          Length = 237

 Score = 48.1 bits (113), Expect(2) = 2e-06
 Identities = 26/69 (37%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
 Frame = +1

Query: 73  EALTRMVLKAQGNNLLQGF---GMAPGCDPIPILQYADDTLIMIETNQDQVRNLRAVLLW 243
           EALTR++ +A G   L G    G       +  L + DDTL+  E ++DQ+ +L  +L+W
Sbjct: 99  EALTRLIHRAVGGGFLSGCRVNGRGGDGALVSHLLFVDDTLVFCEASEDQMVHLSWLLMW 158

Query: 244 SEAVSGLNV 270
            EA+SGL +
Sbjct: 159 FEAISGLRI 167



 Score = 28.1 bits (61), Expect(2) = 2e-06
 Identities = 12/14 (85%), Positives = 12/14 (85%)
 Frame = +2

Query: 2   YFKSSRGLRQEDPL 43
           YF SSRGLRQ DPL
Sbjct: 76  YFNSSRGLRQGDPL 89