BLASTX nr result
ID: Cimicifuga21_contig00033446
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00033446 (600 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI24253.3| unnamed protein product [Vitis vinifera] 255 4e-66 ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containi... 255 4e-66 ref|XP_002313262.1| predicted protein [Populus trichocarpa] gi|2... 242 3e-62 ref|NP_194530.1| pentatricopeptide repeat-containing protein [Ar... 198 7e-49 ref|XP_002869525.1| pentatricopeptide repeat-containing protein ... 197 9e-49 >emb|CBI24253.3| unnamed protein product [Vitis vinifera] Length = 582 Score = 255 bits (652), Expect = 4e-66 Identities = 125/199 (62%), Positives = 151/199 (75%) Frame = +3 Query: 3 LIKGLCKERMFGEALELRVEMVGSNCVPNVITYTTLMDGLCKDGRVDEAMSLLEEMRERG 182 LI GLCK + EA+ L +EM + C PN +T TTLMDGLCKDGR+DEAM LLE M+++G Sbjct: 39 LINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKG 98 Query: 183 LDADVVVYTTLINGLCNNDEVDKGKKLFHEMLDKGIPPNVVTYSCLIHGLCKIGSFQEAI 362 DADVV+Y TLI+G CNN +D+GK+LF EML KGI NVVTYSCL+HGLC++G ++EA Sbjct: 99 FDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEAN 158 Query: 363 VWLSAMAERGICPDVVTYTGLIDGLCKGGRGNQAMEVFQSMKEKGVNPSFVTYNVLINRL 542 L+AMAE GI PDVVTYTGLIDGLCK GR AM++ M EKG PS VTYNVL++ L Sbjct: 159 TVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGL 218 Query: 543 CKEGLVSDAFEFYTKMTER 599 CKEGLV DAF+ M E+ Sbjct: 219 CKEGLVIDAFKILRMMIEK 237 Score = 147 bits (371), Expect = 1e-33 Identities = 81/201 (40%), Positives = 117/201 (58%), Gaps = 2/201 (0%) Frame = +3 Query: 3 LIKGLCKERMFGEALELRVEMVGSNCVPNVITYTTLMDGLCKDGRVDEAMSLLEEMRERG 182 LI G C EL EM+G NV+TY+ L+ GLC+ G+ EA ++L M E G Sbjct: 109 LISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHG 168 Query: 183 LDADVVVYTTLINGLCNNDEVDKGKKLFHEMLDKGIPPNVVTYSCLIHGLCKIGSFQEAI 362 + DVV YT LI+GLC + L + M++KG P+ VTY+ L+ GLCK G +A Sbjct: 169 IHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAF 228 Query: 363 VWLSAMAERGICPDVVTYTGLIDGLCKGGRGNQAMEVFQSM--KEKGVNPSFVTYNVLIN 536 L M E+G DVVTY L+ GLC G+ ++A+++F SM E + P+ T+N+LI Sbjct: 229 KILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIG 288 Query: 537 RLCKEGLVSDAFEFYTKMTER 599 LCKEG ++ A + + KM ++ Sbjct: 289 GLCKEGRLTKAVKIHRKMVKK 309 Score = 137 bits (346), Expect = 1e-30 Identities = 76/200 (38%), Positives = 114/200 (57%), Gaps = 2/200 (1%) Frame = +3 Query: 3 LIKGLCKERMFGEALELRVEMVGSNCVPNVITYTTLMDGLCKDGRVDEAMSLLEEMRERG 182 L+ GLC+ + EA + M P+V+TYT L+DGLCKDGR AM LL M E+G Sbjct: 144 LVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKG 203 Query: 183 LDADVVVYTTLINGLCNNDEVDKGKKLFHEMLDKGIPPNVVTYSCLIHGLCKIGSFQEAI 362 + V Y L++GLC V K+ M++KG +VVTY+ L+ GLC G EA+ Sbjct: 204 EEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEAL 263 Query: 363 VWLSAMAERGIC--PDVVTYTGLIDGLCKGGRGNQAMEVFQSMKEKGVNPSFVTYNVLIN 536 ++M + C P+V T+ LI GLCK GR +A+++ + M +KG + VTYN+L+ Sbjct: 264 KLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLG 323 Query: 537 RLCKEGLVSDAFEFYTKMTE 596 K G + +A E + ++ + Sbjct: 324 GCLKAGKIKEAMELWKQVLD 343 Score = 116 bits (290), Expect = 3e-24 Identities = 68/200 (34%), Positives = 103/200 (51%), Gaps = 2/200 (1%) Frame = +3 Query: 3 LIKGLCKERMFGEALELRVEMVGS-NCV-PNVITYTTLMDGLCKDGRVDEAMSLLEEMRE 176 L+KGLC + EAL+L M + NC+ PNV T+ L+ GLCK+GR+ +A+ + +M + Sbjct: 249 LMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVK 308 Query: 177 RGLDADVVVYTTLINGLCNNDEVDKGKKLFHEMLDKGIPPNVVTYSCLIHGLCKIGSFQE 356 +G ++V Y L+ G ++ + +L+ ++LD G PN TYS LI G CK+ Sbjct: 309 KGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNI 368 Query: 357 AIVWLSAMAERGICPDVVTYTGLIDGLCKGGRGNQAMEVFQSMKEKGVNPSFVTYNVLIN 536 A M G+ P + Y L+ LCK G QA +FQ M P +++N +I+ Sbjct: 369 AKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMID 428 Query: 537 RLCKEGLVSDAFEFYTKMTE 596 K G E KM E Sbjct: 429 GTLKAGDFQFVKELQMKMVE 448 Score = 116 bits (290), Expect = 3e-24 Identities = 64/189 (33%), Positives = 101/189 (53%) Frame = +3 Query: 3 LIKGLCKERMFGEALELRVEMVGSNCVPNVITYTTLMDGLCKDGRVDEAMSLLEEMRERG 182 LI GLCKE +A+++ +MV N++TY L+ G K G++ EAM L +++ + G Sbjct: 286 LIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLG 345 Query: 183 LDADVVVYTTLINGLCNNDEVDKGKKLFHEMLDKGIPPNVVTYSCLIHGLCKIGSFQEAI 362 + Y+ LI+G C ++ K LF EM G+ P + Y+ L+ LCK GS ++A Sbjct: 346 FVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAK 405 Query: 363 VWLSAMAERGICPDVVTYTGLIDGLCKGGRGNQAMEVFQSMKEKGVNPSFVTYNVLINRL 542 M PD++++ +IDG K G E+ M E G+ P +T++ LINRL Sbjct: 406 SLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRL 465 Query: 543 CKEGLVSDA 569 K G + +A Sbjct: 466 SKLGELDEA 474 Score = 107 bits (268), Expect = 1e-21 Identities = 61/199 (30%), Positives = 100/199 (50%) Frame = +3 Query: 3 LIKGLCKERMFGEALELRVEMVGSNCVPNVITYTTLMDGLCKDGRVDEAMSLLEEMRERG 182 L+ G K EA+EL +++ VPN TY+ L+DG CK ++ A L EMR G Sbjct: 321 LLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHG 380 Query: 183 LDADVVVYTTLINGLCNNDEVDKGKKLFHEMLDKGIPPNVVTYSCLIHGLCKIGSFQEAI 362 L+ + Y TL+ LC +++ K LF EM + P++++++ +I G K G FQ Sbjct: 381 LNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVK 440 Query: 363 VWLSAMAERGICPDVVTYTGLIDGLCKGGRGNQAMEVFQSMKEKGVNPSFVTYNVLINRL 542 M E G+ PD +T++ LI+ L K G ++A + M G P + Y+ L+ L Sbjct: 441 ELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGL 500 Query: 543 CKEGLVSDAFEFYTKMTER 599 +G ++ +M + Sbjct: 501 SSKGDTTEIINLLHQMAAK 519 Score = 102 bits (254), Expect = 5e-20 Identities = 58/181 (32%), Positives = 89/181 (49%) Frame = +3 Query: 3 LIKGLCKERMFGEALELRVEMVGSNCVPNVITYTTLMDGLCKDGRVDEAMSLLEEMRERG 182 LI G CK RM A L EM P + Y TLM LCK+G +++A SL +EM Sbjct: 356 LIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNAN 415 Query: 183 LDADVVVYTTLINGLCNNDEVDKGKKLFHEMLDKGIPPNVVTYSCLIHGLCKIGSFQEAI 362 + D++ + T+I+G + K+L +M++ G+ P+ +T+S LI+ L K+G EA Sbjct: 416 CEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAK 475 Query: 363 VWLSAMAERGICPDVVTYTGLIDGLCKGGRGNQAMEVFQSMKEKGVNPSFVTYNVLINRL 542 L M G PD + Y L+ GL G + + + M KG + ++ L Sbjct: 476 SALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCL 535 Query: 543 C 545 C Sbjct: 536 C 536 Score = 87.4 bits (215), Expect = 2e-15 Identities = 54/180 (30%), Positives = 86/180 (47%) Frame = +3 Query: 3 LIKGLCKERMFGEALELRVEMVGSNCVPNVITYTTLMDGLCKDGRVDEAMSLLEEMRERG 182 L+ LCKE +A L EM +NC P++I++ T++DG K G L +M E G Sbjct: 391 LMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMG 450 Query: 183 LDADVVVYTTLINGLCNNDEVDKGKKLFHEMLDKGIPPNVVTYSCLIHGLCKIGSFQEAI 362 L D + ++TLIN L E+D+ K M+ G P+ + Y L+ GL G E I Sbjct: 451 LRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEII 510 Query: 363 VWLSAMAERGICPDVVTYTGLIDGLCKGGRGNQAMEVFQSMKEKGVNPSFVTYNVLINRL 542 L MA +G D + ++ LC + ME+ + + + ++ N L+ +L Sbjct: 511 NLLHQMAAKGTVLDRKIVSTILTCLCHSIQEVDVMELLPTFFQGTSEGASISCNELLMQL 570 >ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g28010-like [Vitis vinifera] Length = 728 Score = 255 bits (652), Expect = 4e-66 Identities = 125/199 (62%), Positives = 151/199 (75%) Frame = +3 Query: 3 LIKGLCKERMFGEALELRVEMVGSNCVPNVITYTTLMDGLCKDGRVDEAMSLLEEMRERG 182 LI GLCK + EA+ L +EM + C PN +T TTLMDGLCKDGR+DEAM LLE M+++G Sbjct: 185 LINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKG 244 Query: 183 LDADVVVYTTLINGLCNNDEVDKGKKLFHEMLDKGIPPNVVTYSCLIHGLCKIGSFQEAI 362 DADVV+Y TLI+G CNN +D+GK+LF EML KGI NVVTYSCL+HGLC++G ++EA Sbjct: 245 FDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEAN 304 Query: 363 VWLSAMAERGICPDVVTYTGLIDGLCKGGRGNQAMEVFQSMKEKGVNPSFVTYNVLINRL 542 L+AMAE GI PDVVTYTGLIDGLCK GR AM++ M EKG PS VTYNVL++ L Sbjct: 305 TVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGL 364 Query: 543 CKEGLVSDAFEFYTKMTER 599 CKEGLV DAF+ M E+ Sbjct: 365 CKEGLVIDAFKILRMMIEK 383 Score = 147 bits (371), Expect = 1e-33 Identities = 81/201 (40%), Positives = 117/201 (58%), Gaps = 2/201 (0%) Frame = +3 Query: 3 LIKGLCKERMFGEALELRVEMVGSNCVPNVITYTTLMDGLCKDGRVDEAMSLLEEMRERG 182 LI G C EL EM+G NV+TY+ L+ GLC+ G+ EA ++L M E G Sbjct: 255 LISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHG 314 Query: 183 LDADVVVYTTLINGLCNNDEVDKGKKLFHEMLDKGIPPNVVTYSCLIHGLCKIGSFQEAI 362 + DVV YT LI+GLC + L + M++KG P+ VTY+ L+ GLCK G +A Sbjct: 315 IHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAF 374 Query: 363 VWLSAMAERGICPDVVTYTGLIDGLCKGGRGNQAMEVFQSM--KEKGVNPSFVTYNVLIN 536 L M E+G DVVTY L+ GLC G+ ++A+++F SM E + P+ T+N+LI Sbjct: 375 KILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIG 434 Query: 537 RLCKEGLVSDAFEFYTKMTER 599 LCKEG ++ A + + KM ++ Sbjct: 435 GLCKEGRLTKAVKIHRKMVKK 455 Score = 137 bits (346), Expect = 1e-30 Identities = 76/200 (38%), Positives = 114/200 (57%), Gaps = 2/200 (1%) Frame = +3 Query: 3 LIKGLCKERMFGEALELRVEMVGSNCVPNVITYTTLMDGLCKDGRVDEAMSLLEEMRERG 182 L+ GLC+ + EA + M P+V+TYT L+DGLCKDGR AM LL M E+G Sbjct: 290 LVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKG 349 Query: 183 LDADVVVYTTLINGLCNNDEVDKGKKLFHEMLDKGIPPNVVTYSCLIHGLCKIGSFQEAI 362 + V Y L++GLC V K+ M++KG +VVTY+ L+ GLC G EA+ Sbjct: 350 EEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEAL 409 Query: 363 VWLSAMAERGIC--PDVVTYTGLIDGLCKGGRGNQAMEVFQSMKEKGVNPSFVTYNVLIN 536 ++M + C P+V T+ LI GLCK GR +A+++ + M +KG + VTYN+L+ Sbjct: 410 KLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLG 469 Query: 537 RLCKEGLVSDAFEFYTKMTE 596 K G + +A E + ++ + Sbjct: 470 GCLKAGKIKEAMELWKQVLD 489 Score = 122 bits (307), Expect = 4e-26 Identities = 67/170 (39%), Positives = 94/170 (55%) Frame = +3 Query: 87 NVITYTTLMDGLCKDGRVDEAMSLLEEMRERGLDADVVVYTTLINGLCNNDEVDKGKKLF 266 NV ++ GLC++G V EAM L+ EM + + D+V Y TLINGLC ++ + L Sbjct: 143 NVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLL 202 Query: 267 HEMLDKGIPPNVVTYSCLIHGLCKIGSFQEAIVWLSAMAERGICPDVVTYTGLIDGLCKG 446 EM G PN VT + L+ GLCK G EA+ L AM ++G DVV Y LI G C Sbjct: 203 LEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNN 262 Query: 447 GRGNQAMEVFQSMKEKGVNPSFVTYNVLINRLCKEGLVSDAFEFYTKMTE 596 G ++ E+F M KG++ + VTY+ L++ LC+ G +A M E Sbjct: 263 GNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAE 312 Score = 116 bits (290), Expect = 3e-24 Identities = 68/200 (34%), Positives = 103/200 (51%), Gaps = 2/200 (1%) Frame = +3 Query: 3 LIKGLCKERMFGEALELRVEMVGS-NCV-PNVITYTTLMDGLCKDGRVDEAMSLLEEMRE 176 L+KGLC + EAL+L M + NC+ PNV T+ L+ GLCK+GR+ +A+ + +M + Sbjct: 395 LMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVK 454 Query: 177 RGLDADVVVYTTLINGLCNNDEVDKGKKLFHEMLDKGIPPNVVTYSCLIHGLCKIGSFQE 356 +G ++V Y L+ G ++ + +L+ ++LD G PN TYS LI G CK+ Sbjct: 455 KGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNI 514 Query: 357 AIVWLSAMAERGICPDVVTYTGLIDGLCKGGRGNQAMEVFQSMKEKGVNPSFVTYNVLIN 536 A M G+ P + Y L+ LCK G QA +FQ M P +++N +I+ Sbjct: 515 AKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMID 574 Query: 537 RLCKEGLVSDAFEFYTKMTE 596 K G E KM E Sbjct: 575 GTLKAGDFQFVKELQMKMVE 594 Score = 116 bits (290), Expect = 3e-24 Identities = 64/189 (33%), Positives = 101/189 (53%) Frame = +3 Query: 3 LIKGLCKERMFGEALELRVEMVGSNCVPNVITYTTLMDGLCKDGRVDEAMSLLEEMRERG 182 LI GLCKE +A+++ +MV N++TY L+ G K G++ EAM L +++ + G Sbjct: 432 LIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLG 491 Query: 183 LDADVVVYTTLINGLCNNDEVDKGKKLFHEMLDKGIPPNVVTYSCLIHGLCKIGSFQEAI 362 + Y+ LI+G C ++ K LF EM G+ P + Y+ L+ LCK GS ++A Sbjct: 492 FVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAK 551 Query: 363 VWLSAMAERGICPDVVTYTGLIDGLCKGGRGNQAMEVFQSMKEKGVNPSFVTYNVLINRL 542 M PD++++ +IDG K G E+ M E G+ P +T++ LINRL Sbjct: 552 SLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRL 611 Query: 543 CKEGLVSDA 569 K G + +A Sbjct: 612 SKLGELDEA 620 Score = 111 bits (278), Expect = 8e-23 Identities = 61/196 (31%), Positives = 103/196 (52%) Frame = +3 Query: 3 LIKGLCKERMFGEALELRVEMVGSNCVPNVITYTTLMDGLCKDGRVDEAMSLLEEMRERG 182 L+ L + R +G A + M + +P+ + + L++ + ++ + +RG Sbjct: 80 LVDALARSRNYGLAFSVYRRMTHVDVLPSFGSLSALIECFADAQKPQLGFGVVGLVLKRG 139 Query: 183 LDADVVVYTTLINGLCNNDEVDKGKKLFHEMLDKGIPPNVVTYSCLIHGLCKIGSFQEAI 362 +V + ++ GLC N V + L EM K + P++V+Y+ LI+GLCK +EA+ Sbjct: 140 FTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAV 199 Query: 363 VWLSAMAERGICPDVVTYTGLIDGLCKGGRGNQAMEVFQSMKEKGVNPSFVTYNVLINRL 542 L M G P+ VT T L+DGLCK GR ++AME+ ++MK+KG + V Y LI+ Sbjct: 200 GLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGF 259 Query: 543 CKEGLVSDAFEFYTKM 590 C G + E + +M Sbjct: 260 CNNGNLDRGKELFDEM 275 Score = 107 bits (268), Expect = 1e-21 Identities = 61/199 (30%), Positives = 100/199 (50%) Frame = +3 Query: 3 LIKGLCKERMFGEALELRVEMVGSNCVPNVITYTTLMDGLCKDGRVDEAMSLLEEMRERG 182 L+ G K EA+EL +++ VPN TY+ L+DG CK ++ A L EMR G Sbjct: 467 LLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHG 526 Query: 183 LDADVVVYTTLINGLCNNDEVDKGKKLFHEMLDKGIPPNVVTYSCLIHGLCKIGSFQEAI 362 L+ + Y TL+ LC +++ K LF EM + P++++++ +I G K G FQ Sbjct: 527 LNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVK 586 Query: 363 VWLSAMAERGICPDVVTYTGLIDGLCKGGRGNQAMEVFQSMKEKGVNPSFVTYNVLINRL 542 M E G+ PD +T++ LI+ L K G ++A + M G P + Y+ L+ L Sbjct: 587 ELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGL 646 Query: 543 CKEGLVSDAFEFYTKMTER 599 +G ++ +M + Sbjct: 647 SSKGDTTEIINLLHQMAAK 665 Score = 102 bits (254), Expect = 5e-20 Identities = 58/181 (32%), Positives = 89/181 (49%) Frame = +3 Query: 3 LIKGLCKERMFGEALELRVEMVGSNCVPNVITYTTLMDGLCKDGRVDEAMSLLEEMRERG 182 LI G CK RM A L EM P + Y TLM LCK+G +++A SL +EM Sbjct: 502 LIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNAN 561 Query: 183 LDADVVVYTTLINGLCNNDEVDKGKKLFHEMLDKGIPPNVVTYSCLIHGLCKIGSFQEAI 362 + D++ + T+I+G + K+L +M++ G+ P+ +T+S LI+ L K+G EA Sbjct: 562 CEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAK 621 Query: 363 VWLSAMAERGICPDVVTYTGLIDGLCKGGRGNQAMEVFQSMKEKGVNPSFVTYNVLINRL 542 L M G PD + Y L+ GL G + + + M KG + ++ L Sbjct: 622 SALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCL 681 Query: 543 C 545 C Sbjct: 682 C 682 Score = 87.4 bits (215), Expect = 2e-15 Identities = 54/180 (30%), Positives = 86/180 (47%) Frame = +3 Query: 3 LIKGLCKERMFGEALELRVEMVGSNCVPNVITYTTLMDGLCKDGRVDEAMSLLEEMRERG 182 L+ LCKE +A L EM +NC P++I++ T++DG K G L +M E G Sbjct: 537 LMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMG 596 Query: 183 LDADVVVYTTLINGLCNNDEVDKGKKLFHEMLDKGIPPNVVTYSCLIHGLCKIGSFQEAI 362 L D + ++TLIN L E+D+ K M+ G P+ + Y L+ GL G E I Sbjct: 597 LRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEII 656 Query: 363 VWLSAMAERGICPDVVTYTGLIDGLCKGGRGNQAMEVFQSMKEKGVNPSFVTYNVLINRL 542 L MA +G D + ++ LC + ME+ + + + ++ N L+ +L Sbjct: 657 NLLHQMAAKGTVLDRKIVSTILTCLCHSIQEVDVMELLPTFFQGTSEGASISCNELLMQL 716 Score = 83.2 bits (204), Expect = 3e-14 Identities = 53/200 (26%), Positives = 95/200 (47%), Gaps = 2/200 (1%) Frame = +3 Query: 6 IKGLCKE--RMFGEALELRVEMVGSNCVPNVITYTTLMDGLCKDGRVDEAMSLLEEMRER 179 ++ LC++ F EA+ L + N +P+ T L+D L + A S+ M Sbjct: 44 LRSLCQKPNSQFTEAVSLFHSALDFNLLPSWATCNFLVDALARSRNYGLAFSVYRRMTHV 103 Query: 180 GLDADVVVYTTLINGLCNNDEVDKGKKLFHEMLDKGIPPNVVTYSCLIHGLCKIGSFQEA 359 + + LI + + G + +L +G NV + ++ GLC+ G EA Sbjct: 104 DVLPSFGSLSALIECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEA 163 Query: 360 IVWLSAMAERGICPDVVTYTGLIDGLCKGGRGNQAMEVFQSMKEKGVNPSFVTYNVLINR 539 + + M + + PD+V+Y LI+GLCK + +A+ + M+ G P+ VT L++ Sbjct: 164 MGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDG 223 Query: 540 LCKEGLVSDAFEFYTKMTER 599 LCK+G + +A E M ++ Sbjct: 224 LCKDGRMDEAMELLEAMKKK 243 >ref|XP_002313262.1| predicted protein [Populus trichocarpa] gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa] Length = 559 Score = 242 bits (618), Expect = 3e-62 Identities = 118/199 (59%), Positives = 147/199 (73%) Frame = +3 Query: 3 LIKGLCKERMFGEALELRVEMVGSNCVPNVITYTTLMDGLCKDGRVDEAMSLLEEMRERG 182 +I GLCKE+ +A++L VEM GS+C PN TY LMDGLCK+GRV+EAM LL EM+ +G Sbjct: 16 IINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAMRLLGEMKRKG 75 Query: 183 LDADVVVYTTLINGLCNNDEVDKGKKLFHEMLDKGIPPNVVTYSCLIHGLCKIGSFQEAI 362 L+ DVVVY+TLI+G C+ +D+GK LF EML+KGI PNVV YSCLI+G CK G ++EA Sbjct: 76 LEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFCKKGLWREAT 135 Query: 363 VWLSAMAERGICPDVVTYTGLIDGLCKGGRGNQAMEVFQSMKEKGVNPSFVTYNVLINRL 542 L M ERGI PDV TYT +I GLCK GR +A+++F M EKG PS VTYNVLIN L Sbjct: 136 AVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVTYNVLINGL 195 Query: 543 CKEGLVSDAFEFYTKMTER 599 CKEG + DAF+ + M E+ Sbjct: 196 CKEGCIGDAFKIFETMLEK 214 Score = 152 bits (385), Expect = 3e-35 Identities = 83/201 (41%), Positives = 112/201 (55%), Gaps = 2/201 (0%) Frame = +3 Query: 3 LIKGLCKERMFGEALELRVEMVGSNCVPNVITYTTLMDGLCKDGRVDEAMSLLEEMRERG 182 LI G C + L EM+ PNV+ Y+ L++G CK G EA ++L M ERG Sbjct: 86 LISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFCKKGLWREATAVLHTMTERG 145 Query: 183 LDADVVVYTTLINGLCNNDEVDKGKKLFHEMLDKGIPPNVVTYSCLIHGLCKIGSFQEAI 362 + DV YT +I GLC + K LF M +KG P+ VTY+ LI+GLCK G +A Sbjct: 146 IQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVTYNVLINGLCKEGCIGDAF 205 Query: 363 VWLSAMAERGICPDVVTYTGLIDGLCKGGRGNQAMEVFQSMKEKG--VNPSFVTYNVLIN 536 M E+G +VV+Y LI GLC G+ ++AM++F S+ E G V P +T+N +I Sbjct: 206 KIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQ 265 Query: 537 RLCKEGLVSDAFEFYTKMTER 599 LCKEG + A E Y M ER Sbjct: 266 GLCKEGRLDKAVEIYDTMIER 286 Score = 114 bits (284), Expect = 2e-23 Identities = 65/200 (32%), Positives = 103/200 (51%), Gaps = 2/200 (1%) Frame = +3 Query: 3 LIKGLCKERMFGEALELRVEMV--GSNCVPNVITYTTLMDGLCKDGRVDEAMSLLEEMRE 176 LI GLC EA++L ++ G+ P+VIT+ T++ GLCK+GR+D+A+ + + M E Sbjct: 226 LIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIE 285 Query: 177 RGLDADVVVYTTLINGLCNNDEVDKGKKLFHEMLDKGIPPNVVTYSCLIHGLCKIGSFQE 356 RG ++ LI + +DK +L+ + G+ P+ TYS +I G CK+ Sbjct: 286 RGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNF 345 Query: 357 AIVWLSAMAERGICPDVVTYTGLIDGLCKGGRGNQAMEVFQSMKEKGVNPSFVTYNVLIN 536 A S M G+ P + Y L+ LCK QA +FQ MKE P +++N++I+ Sbjct: 346 AKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMID 405 Query: 537 RLCKEGLVSDAFEFYTKMTE 596 K G + A E M + Sbjct: 406 GTLKAGDIHSAKELLNDMQQ 425 Score = 108 bits (270), Expect = 7e-22 Identities = 58/144 (40%), Positives = 79/144 (54%) Frame = +3 Query: 168 MRERGLDADVVVYTTLINGLCNNDEVDKGKKLFHEMLDKGIPPNVVTYSCLIHGLCKIGS 347 M+ + D+V Y T+INGLC ++K L EM PN TY L+ GLCK G Sbjct: 1 MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGR 60 Query: 348 FQEAIVWLSAMAERGICPDVVTYTGLIDGLCKGGRGNQAMEVFQSMKEKGVNPSFVTYNV 527 +EA+ L M +G+ DVV Y+ LI G C G ++ +F M EKG++P+ V Y+ Sbjct: 61 VEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSC 120 Query: 528 LINRLCKEGLVSDAFEFYTKMTER 599 LIN CK+GL +A MTER Sbjct: 121 LINGFCKKGLWREATAVLHTMTER 144 Score = 107 bits (267), Expect = 2e-21 Identities = 60/189 (31%), Positives = 96/189 (50%) Frame = +3 Query: 3 LIKGLCKERMFGEALELRVEMVGSNCVPNVITYTTLMDGLCKDGRVDEAMSLLEEMRERG 182 +I+GLCKE +A+E+ M+ N+ T L+ K G +D+AM L + + + G Sbjct: 263 VIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKLG 322 Query: 183 LDADVVVYTTLINGLCNNDEVDKGKKLFHEMLDKGIPPNVVTYSCLIHGLCKIGSFQEAI 362 L Y+ +I+G C ++ K LF M G+ P + Y+ L+ LCK S ++A Sbjct: 323 LVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQAR 382 Query: 363 VWLSAMAERGICPDVVTYTGLIDGLCKGGRGNQAMEVFQSMKEKGVNPSFVTYNVLINRL 542 M E PD +++ +IDG K G + A E+ M++ G+ P TY+ INRL Sbjct: 383 RLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRL 442 Query: 543 CKEGLVSDA 569 K G + +A Sbjct: 443 SKLGQMEEA 451 Score = 97.8 bits (242), Expect = 1e-18 Identities = 54/177 (30%), Positives = 88/177 (49%) Frame = +3 Query: 3 LIKGLCKERMFGEALELRVEMVGSNCVPNVITYTTLMDGLCKDGRVDEAMSLLEEMRERG 182 LI K + +A+EL + VP+ TY+ ++DG CK ++ A L M+ G Sbjct: 298 LIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISG 357 Query: 183 LDADVVVYTTLINGLCNNDEVDKGKKLFHEMLDKGIPPNVVTYSCLIHGLCKIGSFQEAI 362 L + Y TL+ LC +++ ++LF EM + P+ ++++ +I G K G A Sbjct: 358 LSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAK 417 Query: 363 VWLSAMAERGICPDVVTYTGLIDGLCKGGRGNQAMEVFQSMKEKGVNPSFVTYNVLI 533 L+ M + G+ PD TY+ I+ L K G+ +A F SM G+ P Y+ LI Sbjct: 418 ELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLI 474 Score = 96.7 bits (239), Expect = 3e-18 Identities = 54/181 (29%), Positives = 85/181 (46%) Frame = +3 Query: 3 LIKGLCKERMFGEALELRVEMVGSNCVPNVITYTTLMDGLCKDGRVDEAMSLLEEMRERG 182 +I G CK M A L M S P + Y TLM LCK+ +++A L +EM+E Sbjct: 333 MIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESN 392 Query: 183 LDADVVVYTTLINGLCNNDEVDKGKKLFHEMLDKGIPPNVVTYSCLIHGLCKIGSFQEAI 362 + D + + +I+G ++ K+L ++M G+ P+ TYS I+ L K+G +EA Sbjct: 393 CEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAK 452 Query: 363 VWLSAMAERGICPDVVTYTGLIDGLCKGGRGNQAMEVFQSMKEKGVNPSFVTYNVLINRL 542 +M GI PD Y LI G + + + + M + GV N ++ L Sbjct: 453 GAFDSMIASGITPDNHVYDSLIKGFGLNDEIEEVINLLRQMADMGVILDLEITNSILTFL 512 Query: 543 C 545 C Sbjct: 513 C 513 Score = 91.3 bits (225), Expect = 1e-16 Identities = 52/182 (28%), Positives = 87/182 (47%) Frame = +3 Query: 3 LIKGLCKERMFGEALELRVEMVGSNCVPNVITYTTLMDGLCKDGRVDEAMSLLEEMRERG 182 L+ LCKE +A L EM SNC P+ I++ ++DG K G + A LL +M++ G Sbjct: 368 LMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMG 427 Query: 183 LDADVVVYTTLINGLCNNDEVDKGKKLFHEMLDKGIPPNVVTYSCLIHGLCKIGSFQEAI 362 L D Y++ IN L ++++ K F M+ GI P+ Y LI G +E I Sbjct: 428 LTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGLNDEIEEVI 487 Query: 363 VWLSAMAERGICPDVVTYTGLIDGLCKGGRGNQAMEVFQSMKEKGVNPSFVTYNVLINRL 542 L MA+ G+ D+ ++ LC ME+ + + + ++ + L+ ++ Sbjct: 488 NLLRQMADMGVILDLEITNSILTFLCNSAEHLHVMELLPNFSSESSGGTSISCDKLLMKI 547 Query: 543 CK 548 K Sbjct: 548 QK 549 >ref|NP_194530.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] gi|75208278|sp|Q9SUD8.1|PP340_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g28010 gi|4455360|emb|CAB36770.1| putative protein [Arabidopsis thaliana] gi|7269655|emb|CAB79603.1| putative protein [Arabidopsis thaliana] gi|332660020|gb|AEE85420.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] Length = 704 Score = 198 bits (503), Expect = 7e-49 Identities = 96/199 (48%), Positives = 137/199 (68%) Frame = +3 Query: 3 LIKGLCKERMFGEALELRVEMVGSNCVPNVITYTTLMDGLCKDGRVDEAMSLLEEMRERG 182 +I+G C+ + +ALEL EM GS C +++T+ L+D CK G++DEAM L+EM+ G Sbjct: 183 VIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMG 242 Query: 183 LDADVVVYTTLINGLCNNDEVDKGKKLFHEMLDKGIPPNVVTYSCLIHGLCKIGSFQEAI 362 L+AD+VVYT+LI G C+ E+D+GK LF E+L++G P +TY+ LI G CK+G +EA Sbjct: 243 LEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEAS 302 Query: 363 VWLSAMAERGICPDVVTYTGLIDGLCKGGRGNQAMEVFQSMKEKGVNPSFVTYNVLINRL 542 M ERG+ P+V TYTGLIDGLC G+ +A+++ M EK P+ VTYN++IN+L Sbjct: 303 EIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKL 362 Query: 543 CKEGLVSDAFEFYTKMTER 599 CK+GLV+DA E M +R Sbjct: 363 CKDGLVADAVEIVELMKKR 381 Score = 122 bits (305), Expect = 6e-26 Identities = 70/199 (35%), Positives = 103/199 (51%) Frame = +3 Query: 3 LIKGLCKERMFGEALELRVEMVGSNCVPNVITYTTLMDGLCKDGRVDEAMSLLEEMRERG 182 L++ + R G A + M+ NV + L+ GLC++ +A+SLL EMR Sbjct: 113 LLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNS 172 Query: 183 LDADVVVYTTLINGLCNNDEVDKGKKLFHEMLDKGIPPNVVTYSCLIHGLCKIGSFQEAI 362 L DV Y T+I G C E++K +L +EM G ++VT+ LI CK G EA+ Sbjct: 173 LMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAM 232 Query: 363 VWLSAMAERGICPDVVTYTGLIDGLCKGGRGNQAMEVFQSMKEKGVNPSFVTYNVLINRL 542 +L M G+ D+V YT LI G C G ++ +F + E+G +P +TYN LI Sbjct: 233 GFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGF 292 Query: 543 CKEGLVSDAFEFYTKMTER 599 CK G + +A E + M ER Sbjct: 293 CKLGQLKEASEIFEFMIER 311 Score = 121 bits (304), Expect = 8e-26 Identities = 70/201 (34%), Positives = 108/201 (53%), Gaps = 2/201 (0%) Frame = +3 Query: 3 LIKGLCKERMFGEALELRVEMVGSNCVPNVITYTTLMDGLCKDGRVDEAMSLLEEMRERG 182 LI+G C L E++ P ITY TL+ G CK G++ EA + E M ERG Sbjct: 253 LIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERG 312 Query: 183 LDADVVVYTTLINGLCNNDEVDKGKKLFHEMLDKGIPPNVVTYSCLIHGLCKIGSFQEAI 362 + +V YT LI+GLC + + +L + M++K PN VTY+ +I+ LCK G +A+ Sbjct: 313 VRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAV 372 Query: 363 VWLSAMAERGICPDVVTYTGLIDGLCKGGRGNQAMEVFQSMKEKG--VNPSFVTYNVLIN 536 + M +R PD +TY L+ GLC G ++A ++ M + +P ++YN LI+ Sbjct: 373 EIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIH 432 Query: 537 RLCKEGLVSDAFEFYTKMTER 599 LCKE + A + Y + E+ Sbjct: 433 GLCKENRLHQALDIYDLLVEK 453 Score = 120 bits (302), Expect = 1e-25 Identities = 71/200 (35%), Positives = 108/200 (54%), Gaps = 2/200 (1%) Frame = +3 Query: 3 LIKGLCKERMFGEALELRVEMVGSNCVPNVITYTTLMDGLCKDGRVDEAMSLLEEMRERG 182 LI+G CK EA E+ M+ PNV TYT L+DGLC G+ EA+ LL M E+ Sbjct: 288 LIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKD 347 Query: 183 LDADVVVYTTLINGLCNNDEVDKGKKLFHEMLDKGIPPNVVTYSCLIHGLCKIGSFQEA- 359 + + V Y +IN LC + V ++ M + P+ +TY+ L+ GLC G EA Sbjct: 348 EEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEAS 407 Query: 360 -IVWLSAMAERGICPDVVTYTGLIDGLCKGGRGNQAMEVFQSMKEKGVNPSFVTYNVLIN 536 +++L PDV++Y LI GLCK R +QA++++ + EK VT N+L+N Sbjct: 408 KLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLN 467 Query: 537 RLCKEGLVSDAFEFYTKMTE 596 K G V+ A E + ++++ Sbjct: 468 STLKAGDVNKAMELWKQISD 487 Score = 116 bits (291), Expect = 3e-24 Identities = 73/233 (31%), Positives = 110/233 (47%), Gaps = 37/233 (15%) Frame = +3 Query: 3 LIKGLCKERMFGEALELRVEMVGSNCVPNVITYTTLMDGLCKDGRVDEAMSLLEEMRERG 182 LI GLC EAL+L M+ + PN +TY +++ LCKDG V +A+ ++E M++R Sbjct: 323 LIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRR 382 Query: 183 LDADVVVYTTLINGLCNNDEVDKGKKLFHEMLDKG--IPPNVVTYSCLIHGLCKIGSFQE 356 D + Y L+ GLC ++D+ KL + ML P+V++Y+ LIHGLCK + Sbjct: 383 TRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQ 442 Query: 357 AIVWLSAMAERGICPDVVT-----------------------------------YTGLID 431 A+ + E+ D VT YT +ID Sbjct: 443 ALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMID 502 Query: 432 GLCKGGRGNQAMEVFQSMKEKGVNPSFVTYNVLINRLCKEGLVSDAFEFYTKM 590 G CK G N A + M+ + PS YN L++ LCKEG + A+ + +M Sbjct: 503 GFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEM 555 Score = 109 bits (272), Expect = 4e-22 Identities = 63/198 (31%), Positives = 100/198 (50%) Frame = +3 Query: 3 LIKGLCKERMFGEALELRVEMVGSNCVPNVITYTTLMDGLCKDGRVDEAMSLLEEMRERG 182 LI GLCKE +AL++ +V + +T L++ K G V++AM L +++ + Sbjct: 430 LIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSK 489 Query: 183 LDADVVVYTTLINGLCNNDEVDKGKKLFHEMLDKGIPPNVVTYSCLIHGLCKIGSFQEAI 362 + + YT +I+G C ++ K L +M + P+V Y+CL+ LCK GS +A Sbjct: 490 IVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAW 549 Query: 363 VWLSAMAERGICPDVVTYTGLIDGLCKGGRGNQAMEVFQSMKEKGVNPSFVTYNVLINRL 542 M PDVV++ +IDG K G A + M G++P TY+ LINR Sbjct: 550 RLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRF 609 Query: 543 CKEGLVSDAFEFYTKMTE 596 K G + +A F+ KM + Sbjct: 610 LKLGYLDEAISFFDKMVD 627 Score = 97.4 bits (241), Expect = 2e-18 Identities = 59/199 (29%), Positives = 96/199 (48%) Frame = +3 Query: 3 LIKGLCKERMFGEALELRVEMVGSNCVPNVITYTTLMDGLCKDGRVDEAMSLLEEMRERG 182 L+ K +A+EL ++ S V N TYT ++DG CK G ++ A LL +MR Sbjct: 465 LLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSE 524 Query: 183 LDADVVVYTTLINGLCNNDEVDKGKKLFHEMLDKGIPPNVVTYSCLIHGLCKIGSFQEAI 362 L V Y L++ LC +D+ +LF EM P+VV+++ +I G K G + A Sbjct: 525 LQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAE 584 Query: 363 VWLSAMAERGICPDVVTYTGLIDGLCKGGRGNQAMEVFQSMKEKGVNPSFVTYNVLINRL 542 L M+ G+ PD+ TY+ LI+ K G ++A+ F M + G P + ++ Sbjct: 585 SLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYC 644 Query: 543 CKEGLVSDAFEFYTKMTER 599 +G E K+ ++ Sbjct: 645 ISQGETDKLTELVKKLVDK 663 Score = 95.9 bits (237), Expect = 5e-18 Identities = 60/191 (31%), Positives = 96/191 (50%), Gaps = 2/191 (1%) Frame = +3 Query: 3 LIKGLCKERMFGEALELRVEMV--GSNCVPNVITYTTLMDGLCKDGRVDEAMSLLEEMRE 176 L+ GLC + EA +L M+ S P+VI+Y L+ GLCK+ R+ +A+ + + + E Sbjct: 393 LLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVE 452 Query: 177 RGLDADVVVYTTLINGLCNNDEVDKGKKLFHEMLDKGIPPNVVTYSCLIHGLCKIGSFQE 356 + D V L+N +V+K +L+ ++ D I N TY+ +I G CK G Sbjct: 453 KLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNV 512 Query: 357 AIVWLSAMAERGICPDVVTYTGLIDGLCKGGRGNQAMEVFQSMKEKGVNPSFVTYNVLIN 536 A L M + P V Y L+ LCK G +QA +F+ M+ P V++N++I+ Sbjct: 513 AKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMID 572 Query: 537 RLCKEGLVSDA 569 K G + A Sbjct: 573 GSLKAGDIKSA 583 Score = 84.0 bits (206), Expect = 2e-14 Identities = 49/166 (29%), Positives = 79/166 (47%) Frame = +3 Query: 3 LIKGLCKERMFGEALELRVEMVGSNCVPNVITYTTLMDGLCKDGRVDEAMSLLEEMRERG 182 +I G CK M A L +M S P+V Y L+ LCK+G +D+A L EEM+ Sbjct: 500 MIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDN 559 Query: 183 LDADVVVYTTLINGLCNNDEVDKGKKLFHEMLDKGIPPNVVTYSCLIHGLCKIGSFQEAI 362 DVV + +I+G ++ + L M G+ P++ TYS LI+ K+G EAI Sbjct: 560 NFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAI 619 Query: 363 VWLSAMAERGICPDVVTYTGLIDGLCKGGRGNQAMEVFQSMKEKGV 500 + M + G PD ++ G ++ E+ + + +K + Sbjct: 620 SFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDI 665 Score = 63.9 bits (154), Expect = 2e-08 Identities = 39/146 (26%), Positives = 65/146 (44%) Frame = +3 Query: 3 LIKGLCKERMFGEALELRVEMVGSNCVPNVITYTTLMDGLCKDGRVDEAMSLLEEMRERG 182 L+ LCKE +A L EM N P+V+++ ++DG K G + A SLL M G Sbjct: 535 LLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAG 594 Query: 183 LDADVVVYTTLINGLCNNDEVDKGKKLFHEMLDKGIPPNVVTYSCLIHGLCKIGSFQEAI 362 L D+ Y+ LIN +D+ F +M+D G P+ ++ G + Sbjct: 595 LSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLT 654 Query: 363 VWLSAMAERGICPDVVTYTGLIDGLC 440 + + ++ I D ++D +C Sbjct: 655 ELVKKLVDKDIVLDKELTCTVMDYMC 680 >ref|XP_002869525.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata] gi|297315361|gb|EFH45784.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata] Length = 707 Score = 197 bits (502), Expect = 9e-49 Identities = 93/199 (46%), Positives = 138/199 (69%) Frame = +3 Query: 3 LIKGLCKERMFGEALELRVEMVGSNCVPNVITYTTLMDGLCKDGRVDEAMSLLEEMRERG 182 +I+G C+ + +AL+L EM GS C +++T+ L+D CK G++DEAM LL+EM+ +G Sbjct: 183 VIRGFCEGKELEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKG 242 Query: 183 LDADVVVYTTLINGLCNNDEVDKGKKLFHEMLDKGIPPNVVTYSCLIHGLCKIGSFQEAI 362 L+AD++VYT+LI G C+ E+D+GK LF E+L++G P +TY+ LI G CK+G +EA Sbjct: 243 LEADLIVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEAS 302 Query: 363 VWLSAMAERGICPDVVTYTGLIDGLCKGGRGNQAMEVFQSMKEKGVNPSFVTYNVLINRL 542 M ERG+ P+V TYTGLIDGLC G+ +A+++ M +K P+ VTYN++IN+L Sbjct: 303 EIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKL 362 Query: 543 CKEGLVSDAFEFYTKMTER 599 CK+ LV+DA E M +R Sbjct: 363 CKDSLVADALEIVELMKKR 381 Score = 127 bits (318), Expect = 2e-27 Identities = 66/171 (38%), Positives = 95/171 (55%) Frame = +3 Query: 87 NVITYTTLMDGLCKDGRVDEAMSLLEEMRERGLDADVVVYTTLINGLCNNDEVDKGKKLF 266 NV Y L+ GLC++ +A+SLL EMR+ L DVV Y T+I G C E++K +L Sbjct: 141 NVYNYNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEKALQLA 200 Query: 267 HEMLDKGIPPNVVTYSCLIHGLCKIGSFQEAIVWLSAMAERGICPDVVTYTGLIDGLCKG 446 +EM G ++VT+ LI CK G EA+ L M +G+ D++ YT LI G C Sbjct: 201 NEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDC 260 Query: 447 GRGNQAMEVFQSMKEKGVNPSFVTYNVLINRLCKEGLVSDAFEFYTKMTER 599 G ++ +F + E+G +P +TYN LI CK G + +A E + M ER Sbjct: 261 GELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMER 311 Score = 123 bits (308), Expect = 3e-26 Identities = 71/199 (35%), Positives = 109/199 (54%), Gaps = 2/199 (1%) Frame = +3 Query: 3 LIKGLCKERMFGEALELRVEMVGSNCVPNVITYTTLMDGLCKDGRVDEAMSLLEEMRERG 182 LI+G CK EA E+ M+ PNV TYT L+DGLC G+ EA+ LL M ++ Sbjct: 288 LIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKD 347 Query: 183 LDADVVVYTTLINGLCNNDEVDKGKKLFHEMLDKGIPPNVVTYSCLIHGLCKIGSFQEA- 359 + +VV Y +IN LC + V ++ M + P+ +TY+ L+ GLC G EA Sbjct: 348 EEPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEAS 407 Query: 360 -IVWLSAMAERGICPDVVTYTGLIDGLCKGGRGNQAMEVFQSMKEKGVNPSFVTYNVLIN 536 +++L PDV+++ LI GLCKG R +QA++++ + EK VT N+L+N Sbjct: 408 KLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLN 467 Query: 537 RLCKEGLVSDAFEFYTKMT 593 K G V+ A E + +++ Sbjct: 468 STLKSGDVNKAMELWKQIS 486 Score = 120 bits (300), Expect = 2e-25 Identities = 70/201 (34%), Positives = 106/201 (52%), Gaps = 2/201 (0%) Frame = +3 Query: 3 LIKGLCKERMFGEALELRVEMVGSNCVPNVITYTTLMDGLCKDGRVDEAMSLLEEMRERG 182 LI+G C L E++ P ITY TL+ G CK GR+ EA + E M ERG Sbjct: 253 LIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERG 312 Query: 183 LDADVVVYTTLINGLCNNDEVDKGKKLFHEMLDKGIPPNVVTYSCLIHGLCKIGSFQEAI 362 + +V YT LI+GLC + + +L + ML K PNVVTY+ +I+ LCK +A+ Sbjct: 313 VRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADAL 372 Query: 363 VWLSAMAERGICPDVVTYTGLIDGLCKGGRGNQAMEVFQSMKEKG--VNPSFVTYNVLIN 536 + M +R PD +TY L+ GLC G ++A ++ M + +P +++N LI+ Sbjct: 373 EIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIH 432 Query: 537 RLCKEGLVSDAFEFYTKMTER 599 LCK + A + Y + E+ Sbjct: 433 GLCKGNRLHQALDIYDLLVEK 453 Score = 114 bits (285), Expect = 1e-23 Identities = 72/233 (30%), Positives = 115/233 (49%), Gaps = 37/233 (15%) Frame = +3 Query: 3 LIKGLCKERMFGEALELRVEMVGSNCVPNVITYTTLMDGLCKDGRVDEAMSLLEEMRERG 182 LI GLC EAL+L M+ + PNV+TY +++ LCKD V +A+ ++E M++R Sbjct: 323 LIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEIVELMKKRR 382 Query: 183 LDADVVVYTTLINGLCNNDEVDKGKKLFHEMLDKG--IPPNVVTYSCLIHGLCKIGSFQE 356 D + Y +L+ GLC ++D+ KL + ML P+V++++ LIHGLCK + Sbjct: 383 TRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQ 442 Query: 357 AI-------------------VWLSAMAERG----------------ICPDVVTYTGLID 431 A+ + L++ + G I P+ TYT +ID Sbjct: 443 ALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMID 502 Query: 432 GLCKGGRGNQAMEVFQSMKEKGVNPSFVTYNVLINRLCKEGLVSDAFEFYTKM 590 G CK G N A + M+ + PS YN L++ LCK+G + A+ + +M Sbjct: 503 GFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLCKKGTLDQAWRLFEEM 555 Score = 111 bits (278), Expect = 8e-23 Identities = 62/198 (31%), Positives = 101/198 (51%) Frame = +3 Query: 3 LIKGLCKERMFGEALELRVEMVGSNCVPNVITYTTLMDGLCKDGRVDEAMSLLEEMRERG 182 LI GLCK +AL++ +V +++T L++ K G V++AM L +++ Sbjct: 430 LIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQISNSK 489 Query: 183 LDADVVVYTTLINGLCNNDEVDKGKKLFHEMLDKGIPPNVVTYSCLIHGLCKIGSFQEAI 362 + + YTT+I+G C ++ K L +M +PP+V Y+CL+ LCK G+ +A Sbjct: 490 IVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLCKKGTLDQAW 549 Query: 363 VWLSAMAERGICPDVVTYTGLIDGLCKGGRGNQAMEVFQSMKEKGVNPSFVTYNVLINRL 542 M PDV+++ +IDG K G A + M G++P TY+ LINR Sbjct: 550 RLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAESLLVGMSHAGLSPDLFTYSKLINRF 609 Query: 543 CKEGLVSDAFEFYTKMTE 596 K G + +A F+ KM + Sbjct: 610 LKLGYLDEAISFFDKMID 627 Score = 103 bits (258), Expect = 2e-20 Identities = 61/199 (30%), Positives = 99/199 (49%) Frame = +3 Query: 3 LIKGLCKERMFGEALELRVEMVGSNCVPNVITYTTLMDGLCKDGRVDEAMSLLEEMRERG 182 L+ K +A+EL ++ S VPN TYTT++DG CK G ++ A LL +MR Sbjct: 465 LLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSE 524 Query: 183 LDADVVVYTTLINGLCNNDEVDKGKKLFHEMLDKGIPPNVVTYSCLIHGLCKIGSFQEAI 362 L V Y L++ LC +D+ +LF EM P+V++++ +I G K G + A Sbjct: 525 LPPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAE 584 Query: 363 VWLSAMAERGICPDVVTYTGLIDGLCKGGRGNQAMEVFQSMKEKGVNPSFVTYNVLINRL 542 L M+ G+ PD+ TY+ LI+ K G ++A+ F M + G P + ++ Sbjct: 585 SLLVGMSHAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMIDSGFEPDAHICDSVLKYC 644 Query: 543 CKEGLVSDAFEFYTKMTER 599 +G EF K+ ++ Sbjct: 645 ISQGETDKLTEFVKKLVDK 663 Score = 97.1 bits (240), Expect = 2e-18 Identities = 58/191 (30%), Positives = 98/191 (51%), Gaps = 2/191 (1%) Frame = +3 Query: 3 LIKGLCKERMFGEALELRVEMV--GSNCVPNVITYTTLMDGLCKDGRVDEAMSLLEEMRE 176 L+ GLC + EA +L M+ S P+VI++ L+ GLCK R+ +A+ + + + E Sbjct: 393 LLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALDIYDLLVE 452 Query: 177 RGLDADVVVYTTLINGLCNNDEVDKGKKLFHEMLDKGIPPNVVTYSCLIHGLCKIGSFQE 356 + D+V L+N + +V+K +L+ ++ + I PN TY+ +I G CK G Sbjct: 453 KLGAGDIVTTNILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNV 512 Query: 357 AIVWLSAMAERGICPDVVTYTGLIDGLCKGGRGNQAMEVFQSMKEKGVNPSFVTYNVLIN 536 A L M + P V Y L+ LCK G +QA +F+ M+ P +++N++I+ Sbjct: 513 AKGLLCKMRLSELPPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMID 572 Query: 537 RLCKEGLVSDA 569 K G + A Sbjct: 573 GSLKAGDIKSA 583 Score = 81.6 bits (200), Expect = 9e-14 Identities = 49/166 (29%), Positives = 77/166 (46%) Frame = +3 Query: 3 LIKGLCKERMFGEALELRVEMVGSNCVPNVITYTTLMDGLCKDGRVDEAMSLLEEMRERG 182 +I G CK M A L +M S P+V Y L+ LCK G +D+A L EEM+ Sbjct: 500 MIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDD 559 Query: 183 LDADVVVYTTLINGLCNNDEVDKGKKLFHEMLDKGIPPNVVTYSCLIHGLCKIGSFQEAI 362 DV+ + +I+G ++ + L M G+ P++ TYS LI+ K+G EAI Sbjct: 560 SFPDVISFNIMIDGSLKAGDIKSAESLLVGMSHAGLSPDLFTYSKLINRFLKLGYLDEAI 619 Query: 363 VWLSAMAERGICPDVVTYTGLIDGLCKGGRGNQAMEVFQSMKEKGV 500 + M + G PD ++ G ++ E + + +K V Sbjct: 620 SFFDKMIDSGFEPDAHICDSVLKYCISQGETDKLTEFVKKLVDKDV 665 Score = 62.8 bits (151), Expect = 4e-08 Identities = 37/146 (25%), Positives = 66/146 (45%) Frame = +3 Query: 3 LIKGLCKERMFGEALELRVEMVGSNCVPNVITYTTLMDGLCKDGRVDEAMSLLEEMRERG 182 L+ LCK+ +A L EM + P+VI++ ++DG K G + A SLL M G Sbjct: 535 LLSSLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAESLLVGMSHAG 594 Query: 183 LDADVVVYTTLINGLCNNDEVDKGKKLFHEMLDKGIPPNVVTYSCLIHGLCKIGSFQEAI 362 L D+ Y+ LIN +D+ F +M+D G P+ ++ G + Sbjct: 595 LSPDLFTYSKLINRFLKLGYLDEAISFFDKMIDSGFEPDAHICDSVLKYCISQGETDKLT 654 Query: 363 VWLSAMAERGICPDVVTYTGLIDGLC 440 ++ + ++ + D ++D +C Sbjct: 655 EFVKKLVDKDVVLDKELTCTVMDYMC 680