BLASTX nr result

ID: Cimicifuga21_contig00033430 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00033430
         (314 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273413.2| PREDICTED: TMV resistance protein N-like [Vi...    56   3e-06

>ref|XP_002273413.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1640

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 31/71 (43%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
 Frame = +3

Query: 12   WVYILGLPFNLWSLENLRTIGDNLGKFIKADSDSLNFENLQGPRILVEFGNFAQ-EWFQA 188
            WV I+GLP +LWS E LR +GD  G FI AD ++ +  +LQ  RILV++G  A+    + 
Sbjct: 1406 WVRIVGLPISLWSPEILRRVGDACGGFITADENTRSIRDLQWARILVKWGGEARPNVLEI 1465

Query: 189  SAEVDKVVFSL 221
              E +  V SL
Sbjct: 1466 EGEEESYVVSL 1476


Top