BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00033406
         (364 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004165440.1| PREDICTED: mediator of RNA polymerase II tra...   124   8e-27
ref|XP_002516789.1| conserved hypothetical protein [Ricinus comm...   123   1e-26
ref|XP_002883436.1| hypothetical protein ARALYDRAFT_479868 [Arab...   122   2e-26
dbj|BAC41797.1| unknown protein [Arabidopsis thaliana]                122   2e-26
ref|NP_189001.1| REF4-related 1 protein [Arabidopsis thaliana] g...   122   2e-26

>ref|XP_004165440.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            33A-like [Cucumis sativus]
          Length = 1311

 Score =  124 bits (311), Expect = 8e-27
 Identities = 57/66 (86%), Positives = 63/66 (95%)
 Frame = -3

Query: 200  LLAGGTSPATLPLPLAAFVSLTITYKLDKASERYLNLAGPAMESLAAGCPWPCMPIVASL 21
            L AGG+SPATLPLPLAAFVSLTITYK+D+AS+R+LNLAGPA+ESLAAGCPWPCMPIVASL
Sbjct: 937  LAAGGSSPATLPLPLAAFVSLTITYKIDRASQRFLNLAGPALESLAAGCPWPCMPIVASL 996

Query: 20   WAQKVK 3
            W QK K
Sbjct: 997  WTQKAK 1002


>ref|XP_002516789.1| conserved hypothetical protein [Ricinus communis]
            gi|223543877|gb|EEF45403.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1325

 Score =  123 bits (309), Expect = 1e-26
 Identities = 57/66 (86%), Positives = 62/66 (93%)
 Frame = -3

Query: 200  LLAGGTSPATLPLPLAAFVSLTITYKLDKASERYLNLAGPAMESLAAGCPWPCMPIVASL 21
            L +GG+SPATLPLPLAAFVSLTITYK+DKASER+LNLAGPA+E LAAGCPWPCMPIVASL
Sbjct: 952  LASGGSSPATLPLPLAAFVSLTITYKIDKASERFLNLAGPALECLAAGCPWPCMPIVASL 1011

Query: 20   WAQKVK 3
            W QK K
Sbjct: 1012 WTQKAK 1017


>ref|XP_002883436.1| hypothetical protein ARALYDRAFT_479868 [Arabidopsis lyrata subsp.
            lyrata] gi|297329276|gb|EFH59695.1| hypothetical protein
            ARALYDRAFT_479868 [Arabidopsis lyrata subsp. lyrata]
          Length = 1309

 Score =  122 bits (307), Expect = 2e-26
 Identities = 57/66 (86%), Positives = 61/66 (92%)
 Frame = -3

Query: 200  LLAGGTSPATLPLPLAAFVSLTITYKLDKASERYLNLAGPAMESLAAGCPWPCMPIVASL 21
            L  GG+SPATLPLPLAAFVSLTITYK+DKASER+LNLAGPA+E LAAGCPWPCMPIVASL
Sbjct: 934  LAPGGSSPATLPLPLAAFVSLTITYKIDKASERFLNLAGPALECLAAGCPWPCMPIVASL 993

Query: 20   WAQKVK 3
            W QK K
Sbjct: 994  WTQKAK 999


>dbj|BAC41797.1| unknown protein [Arabidopsis thaliana]
          Length = 1309

 Score =  122 bits (307), Expect = 2e-26
 Identities = 57/66 (86%), Positives = 61/66 (92%)
 Frame = -3

Query: 200  LLAGGTSPATLPLPLAAFVSLTITYKLDKASERYLNLAGPAMESLAAGCPWPCMPIVASL 21
            L  GG+SPATLPLPLAAFVSLTITYK+DKASER+LNLAGPA+E LAAGCPWPCMPIVASL
Sbjct: 934  LAPGGSSPATLPLPLAAFVSLTITYKIDKASERFLNLAGPALECLAAGCPWPCMPIVASL 993

Query: 20   WAQKVK 3
            W QK K
Sbjct: 994  WTQKAK 999


>ref|NP_189001.1| REF4-related 1 protein [Arabidopsis thaliana]
            gi|75274224|sp|Q9LUG9.1|MD33A_ARATH RecName:
            Full=Mediator of RNA polymerase II transcription subunit
            33A; AltName: Full=REF4-related 1 protein; AltName:
            Full=REF4-resembling 1 protein gi|9294515|dbj|BAB02777.1|
            unnamed protein product [Arabidopsis thaliana]
            gi|332643259|gb|AEE76780.1| REF4-related 1 protein
            [Arabidopsis thaliana]
          Length = 1309

 Score =  122 bits (307), Expect = 2e-26
 Identities = 57/66 (86%), Positives = 61/66 (92%)
 Frame = -3

Query: 200  LLAGGTSPATLPLPLAAFVSLTITYKLDKASERYLNLAGPAMESLAAGCPWPCMPIVASL 21
            L  GG+SPATLPLPLAAFVSLTITYK+DKASER+LNLAGPA+E LAAGCPWPCMPIVASL
Sbjct: 934  LAPGGSSPATLPLPLAAFVSLTITYKIDKASERFLNLAGPALECLAAGCPWPCMPIVASL 993

Query: 20   WAQKVK 3
            W QK K
Sbjct: 994  WTQKAK 999