BLASTX nr result

ID: Cimicifuga21_contig00033403 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00033403
         (604 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEC83666.1| hypothetical protein OsI_29439 [Oryza sativa Indi...    68   1e-09
ref|NP_001061946.1| Os08g0451400 [Oryza sativa Japonica Group] g...    68   1e-09
ref|XP_002324130.1| predicted protein [Populus trichocarpa] gi|2...    65   9e-09
tpg|DAA48833.1| TPA: hypothetical protein ZEAMMB73_656706 [Zea m...    64   2e-08
tpg|DAA48832.1| TPA: hypothetical protein ZEAMMB73_656706 [Zea m...    64   2e-08

>gb|EEC83666.1| hypothetical protein OsI_29439 [Oryza sativa Indica Group]
          Length = 761

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 36/65 (55%), Positives = 40/65 (61%), Gaps = 2/65 (3%)
 Frame = +2

Query: 416 MLSFQGHQKSTCTLLAVLCGKLFDSKHTQKCLPSEGDRPR--YPFPELVSWGRLEVHTLT 589
           M   Q      CTLLAVLCGK+ D +     L  E  RPR  YPFPEL+S GRLEVHTL 
Sbjct: 1   MAQIQSSSLVNCTLLAVLCGKVTDKQQKPPGLVPEVKRPRLSYPFPELISSGRLEVHTLI 60

Query: 590 NPTTE 604
           NPT +
Sbjct: 61  NPTVD 65


>ref|NP_001061946.1| Os08g0451400 [Oryza sativa Japonica Group]
           gi|113623915|dbj|BAF23860.1| Os08g0451400 [Oryza sativa
           Japonica Group] gi|222640662|gb|EEE68794.1| hypothetical
           protein OsJ_27533 [Oryza sativa Japonica Group]
          Length = 761

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 36/65 (55%), Positives = 40/65 (61%), Gaps = 2/65 (3%)
 Frame = +2

Query: 416 MLSFQGHQKSTCTLLAVLCGKLFDSKHTQKCLPSEGDRPR--YPFPELVSWGRLEVHTLT 589
           M   Q      CTLLAVLCGK+ D +     L  E  RPR  YPFPEL+S GRLEVHTL 
Sbjct: 1   MAQIQSSSLVNCTLLAVLCGKVTDKQQKPPGLVPEVKRPRLSYPFPELISSGRLEVHTLI 60

Query: 590 NPTTE 604
           NPT +
Sbjct: 61  NPTVD 65


>ref|XP_002324130.1| predicted protein [Populus trichocarpa] gi|222865564|gb|EEF02695.1|
           predicted protein [Populus trichocarpa]
          Length = 745

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 34/63 (53%), Positives = 40/63 (63%)
 Frame = +2

Query: 416 MLSFQGHQKSTCTLLAVLCGKLFDSKHTQKCLPSEGDRPRYPFPELVSWGRLEVHTLTNP 595
           M   QG  ++ CTLLAVLCGK  + K     LP   D+PRYP PEL S GRLEV  L NP
Sbjct: 1   MFHAQGPLRNHCTLLAVLCGKSGEQK-----LPLSDDKPRYPLPELESTGRLEVQVLNNP 55

Query: 596 TTE 604
           +T+
Sbjct: 56  STD 58


>tpg|DAA48833.1| TPA: hypothetical protein ZEAMMB73_656706 [Zea mays]
          Length = 276

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 34/65 (52%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
 Frame = +2

Query: 416 MLSFQGHQKSTCTLLAVLCGKLFDSKHTQKCLPSEGDRPR--YPFPELVSWGRLEVHTLT 589
           M   Q   +  CTLLAVLCG+  + + T   L  +  R R  YPFPEL S GRLEVHTL 
Sbjct: 1   MPQIQNTMRQNCTLLAVLCGEFAEKRQTPASLAPDTKRLRLSYPFPELASSGRLEVHTLI 60

Query: 590 NPTTE 604
           NPT E
Sbjct: 61  NPTLE 65


>tpg|DAA48832.1| TPA: hypothetical protein ZEAMMB73_656706 [Zea mays]
          Length = 351

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 34/65 (52%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
 Frame = +2

Query: 416 MLSFQGHQKSTCTLLAVLCGKLFDSKHTQKCLPSEGDRPR--YPFPELVSWGRLEVHTLT 589
           M   Q   +  CTLLAVLCG+  + + T   L  +  R R  YPFPEL S GRLEVHTL 
Sbjct: 99  MPQIQNTMRQNCTLLAVLCGEFAEKRQTPASLAPDTKRLRLSYPFPELASSGRLEVHTLI 158

Query: 590 NPTTE 604
           NPT E
Sbjct: 159 NPTLE 163


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