BLASTX nr result

ID: Cimicifuga21_contig00033388 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00033388
         (325 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN63485.1| hypothetical protein VITISV_017086 [Vitis vinifera]   105   4e-21
ref|XP_002281981.1| PREDICTED: uncharacterized protein LOC100253...   105   5e-21
ref|XP_002313839.1| predicted protein [Populus trichocarpa] gi|2...    97   1e-18
ref|XP_002521862.1| conserved hypothetical protein [Ricinus comm...    96   4e-18
ref|XP_004136989.1| PREDICTED: uncharacterized protein LOC101207...    88   6e-16

>emb|CAN63485.1| hypothetical protein VITISV_017086 [Vitis vinifera]
          Length = 366

 Score =  105 bits (262), Expect = 4e-21
 Identities = 60/121 (49%), Positives = 80/121 (66%), Gaps = 20/121 (16%)
 Frame = -1

Query: 304 QMAILISVPAMDNNFDSSCSTPFMSAPSSPKLFGDMYFSAPTSPTRSSALYRDFNNISFV 125
           +M ++I VPA+D NFDS+CSTPF+SAPSSP+ FG+ +FSAPTSP+R+SA YR+FN+ +F 
Sbjct: 2   EMEVVIPVPAVDFNFDSACSTPFISAPSSPQRFGN-FFSAPTSPSRASAFYREFNDFNFS 60

Query: 124 QRTSTSCDASPLSND------------------THLIDQD--DFAFDFNGQIERPSSTAD 5
            R S++  AS +  D                  T   D D  DFAFDF+GQ+ER S +AD
Sbjct: 61  GRDSSASAASVIPFDWEEKPGIPKVKTAATRSTTRDEDDDDQDFAFDFSGQLERTSLSAD 120

Query: 4   E 2
           E
Sbjct: 121 E 121


>ref|XP_002281981.1| PREDICTED: uncharacterized protein LOC100253812 [Vitis vinifera]
          Length = 365

 Score =  105 bits (261), Expect = 5e-21
 Identities = 60/121 (49%), Positives = 79/121 (65%), Gaps = 20/121 (16%)
 Frame = -1

Query: 304 QMAILISVPAMDNNFDSSCSTPFMSAPSSPKLFGDMYFSAPTSPTRSSALYRDFNNISFV 125
           +M ++I VPA+D NFDS+CSTPF+SAPSSP+ FG  +FSAPTSP+R+SA YR+FN+ +F 
Sbjct: 2   EMEVVIPVPAVDFNFDSACSTPFISAPSSPQRFGS-FFSAPTSPSRASAFYREFNDFNFS 60

Query: 124 QRTSTSCDASPLSND------------------THLIDQD--DFAFDFNGQIERPSSTAD 5
            R S++  AS +  D                  T   D D  DFAFDF+GQ+ER S +AD
Sbjct: 61  GRDSSASAASVIPFDWEEKPGIPKVKTAATRSTTRDEDDDDQDFAFDFSGQLERTSLSAD 120

Query: 4   E 2
           E
Sbjct: 121 E 121


>ref|XP_002313839.1| predicted protein [Populus trichocarpa] gi|222850247|gb|EEE87794.1|
           predicted protein [Populus trichocarpa]
          Length = 375

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 53/118 (44%), Positives = 77/118 (65%), Gaps = 17/118 (14%)
 Frame = -1

Query: 304 QMAILISVPAMDNNFDSSCSTPFMSAPSSPKLFGDMYFSAPTSPTRSSALYRDFNNISFV 125
           +M I++ VP +D NFDS+CS+P+M+APSSP+ FG++ FSAPTSPTR S+ YR+ N+I+  
Sbjct: 2   EMEIVMPVPPVDFNFDSTCSSPYMTAPSSPQRFGNLLFSAPTSPTRMSSFYRELNDITLS 61

Query: 124 QRTSTSC-------DASPLS---------NDTHLID-QDDFAFDFNGQIERPSSTADE 2
             +S++          +P S         ND  L D  +DF FDF+GQ+ER S +A+E
Sbjct: 62  TNSSSTIPFDWGKKPGTPKSKNQSEDNNKNDGDLDDYNEDFEFDFSGQLERTSLSAEE 119


>ref|XP_002521862.1| conserved hypothetical protein [Ricinus communis]
           gi|223538900|gb|EEF40498.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 382

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 49/117 (41%), Positives = 75/117 (64%), Gaps = 16/117 (13%)
 Frame = -1

Query: 304 QMAILISVPAM--DNNFDSSCSTPFMSAPSSPKLFGDMYFSAPTSPTRSSALYRDFNNIS 131
           +M ++++VP +  D NFDS+CS+P+M+APSSP+ FG+ + SAPTSPTRSS+ +R+ N++S
Sbjct: 2   EMEVVVAVPPVPVDFNFDSTCSSPYMTAPSSPQRFGNFFSSAPTSPTRSSSFFRELNDVS 61

Query: 130 FVQRTST--------------SCDASPLSNDTHLIDQDDFAFDFNGQIERPSSTADE 2
               +S+                + +  S D   ID  DF FDF+GQ++R S +ADE
Sbjct: 62  LATNSSSIPFDWEEKPGTPKARKNTNHDSEDFDFIDDGDFEFDFSGQLDRTSLSADE 118


>ref|XP_004136989.1| PREDICTED: uncharacterized protein LOC101207472 [Cucumis sativus]
          Length = 366

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 48/115 (41%), Positives = 69/115 (60%), Gaps = 15/115 (13%)
 Frame = -1

Query: 301 MAILISVPAMDNNFDSSCSTPFMSAPSSPKLFGDMYF-SAPTSPTRSSALYRDFNNIS-- 131
           M + + V  +D NFDS+CS+P+M+APSSP+ FG+ +F SAPTSP+ ++A Y DFN+    
Sbjct: 1   MEVAVPVSPVDFNFDSACSSPYMTAPSSPQRFGNFFFSSAPTSPSHAAAFYYDFNDFDSP 60

Query: 130 FVQRTSTSCDASPL------------SNDTHLIDQDDFAFDFNGQIERPSSTADE 2
           +V   S+S    P              +    +  DDF FDF+GQ+ER S +ADE
Sbjct: 61  YVDGRSSSASEIPFLWEDLPGIVKSGGDACSSVADDDFQFDFSGQLERTSLSADE 115


Top