BLASTX nr result

ID: Cimicifuga21_contig00033383 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00033383
         (293 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK36739.1| unknown [Lotus japonicus]                               73   3e-11
gb|ACU16068.1| unknown [Glycine max]                                   72   4e-11
ref|XP_002301686.1| predicted protein [Populus trichocarpa] gi|2...    72   6e-11
ref|NP_001238444.1| peroxisomal small heat shock protein [Glycin...    71   8e-11
ref|NP_001239965.1| uncharacterized protein LOC100802108 [Glycin...    70   1e-10

>gb|AFK36739.1| unknown [Lotus japonicus]
          Length = 144

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 34/66 (51%), Positives = 45/66 (68%), Gaps = 5/66 (7%)
 Frame = +3

Query: 102 PFW*LLWSTPT-----SRSTTLMGWIKIPTAHIYKSNVPGFWKEGIKVEVEDGNVLHIRG 266
           PF   LW  P      S ST L+ W++ PTAHI K NVPGF K+ IKV++EDGN+LH++G
Sbjct: 9   PFGRFLWGHPPIYREWSGSTPLLDWLESPTAHILKINVPGFSKDDIKVQIEDGNILHVKG 68

Query: 267 ERAKKD 284
           E  K++
Sbjct: 69  EGGKEE 74


>gb|ACU16068.1| unknown [Glycine max]
          Length = 144

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 35/67 (52%), Positives = 46/67 (68%), Gaps = 5/67 (7%)
 Frame = +3

Query: 102 PFW*LLWSTPT-----SRSTTLMGWIKIPTAHIYKSNVPGFWKEGIKVEVEDGNVLHIRG 266
           PF   +W  P      S ST L+ W++ PTAHI K NVPGF KE IKV++EDGN+LHI+G
Sbjct: 9   PFRHFIWGYPPIFKEWSGSTALLDWLESPTAHILKINVPGFSKEDIKVQIEDGNILHIKG 68

Query: 267 ERAKKDL 287
           E  +++L
Sbjct: 69  EVWREEL 75


>ref|XP_002301686.1| predicted protein [Populus trichocarpa] gi|222843412|gb|EEE80959.1|
           predicted protein [Populus trichocarpa]
          Length = 141

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 37/71 (52%), Positives = 47/71 (66%), Gaps = 4/71 (5%)
 Frame = +3

Query: 84  DYFLSDPFW*LLWSTPT----SRSTTLMGWIKIPTAHIYKSNVPGFWKEGIKVEVEDGNV 251
           D F   PF  L  S P     S ST LM W++ PTAHI+K NVPGF KE IKV+V +GN+
Sbjct: 3   DGFFGYPFRRLFLSPPAYHEWSGSTALMDWLESPTAHIFKVNVPGFNKEDIKVQVGEGNI 62

Query: 252 LHIRGERAKKD 284
           LHI+G+  K++
Sbjct: 63  LHIKGDGGKEE 73


>ref|NP_001238444.1| peroxisomal small heat shock protein [Glycine max]
           gi|167962173|dbj|BAG09378.1| peroxisomal small heat
           shock protein [Glycine max]
          Length = 144

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 34/61 (55%), Positives = 42/61 (68%), Gaps = 5/61 (8%)
 Frame = +3

Query: 102 PFW*LLWSTPT-----SRSTTLMGWIKIPTAHIYKSNVPGFWKEGIKVEVEDGNVLHIRG 266
           PF   +W  P      S ST L+ W++ PTAHI K NVPGF KE IKV++EDGN+LHI+G
Sbjct: 9   PFRHFIWGHPPIFKEWSGSTALLDWLESPTAHILKINVPGFSKEDIKVQIEDGNILHIKG 68

Query: 267 E 269
           E
Sbjct: 69  E 69


>ref|NP_001239965.1| uncharacterized protein LOC100802108 [Glycine max]
           gi|255648026|gb|ACU24469.1| unknown [Glycine max]
          Length = 144

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 34/72 (47%), Positives = 45/72 (62%), Gaps = 5/72 (6%)
 Frame = +3

Query: 84  DYFLSDPFW*LLWSTPT-----SRSTTLMGWIKIPTAHIYKSNVPGFWKEGIKVEVEDGN 248
           D     PF   +W  P      S S  L+ W++ PTAHI K NVPGF KE IKV++EDGN
Sbjct: 3   DAIFGYPFRRFIWGHPPIFREWSGSIALLDWLESPTAHILKVNVPGFSKEDIKVQIEDGN 62

Query: 249 VLHIRGERAKKD 284
           +LHI+GE  +++
Sbjct: 63  ILHIKGEGGREE 74


Top