BLASTX nr result

ID: Cimicifuga21_contig00033381 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00033381
         (288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264685.1| PREDICTED: APO protein 1, chloroplastic [Vit...    77   2e-12
emb|CAN79322.1| hypothetical protein VITISV_018985 [Vitis vinifera]    77   2e-12
ref|XP_002520827.1| APO protein 3, mitochondrial precursor, puta...    75   7e-12
ref|XP_002329944.1| predicted protein [Populus trichocarpa] gi|2...    74   2e-11
ref|XP_003548251.1| PREDICTED: APO protein 1, chloroplastic-like...    72   4e-11

>ref|XP_002264685.1| PREDICTED: APO protein 1, chloroplastic [Vitis vinifera]
           gi|297734690|emb|CBI16741.3| unnamed protein product
           [Vitis vinifera]
          Length = 444

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 35/43 (81%), Positives = 39/43 (90%)
 Frame = -3

Query: 286 FYGKAPAVIELCMQAGAEVPLKYKPMMRLDIVVPDAEERSLVA 158
           FYGKAPAV+E+CMQAGA+VP KYKPMMRLDIV+PD EE  LVA
Sbjct: 402 FYGKAPAVVEVCMQAGAQVPDKYKPMMRLDIVIPDTEESRLVA 444


>emb|CAN79322.1| hypothetical protein VITISV_018985 [Vitis vinifera]
          Length = 932

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 35/43 (81%), Positives = 39/43 (90%)
 Frame = -3

Query: 286  FYGKAPAVIELCMQAGAEVPLKYKPMMRLDIVVPDAEERSLVA 158
            FYGKAPAV+E+CMQAGA+VP KYKPMMRLDIV+PD EE  LVA
Sbjct: 890  FYGKAPAVVEVCMQAGAQVPDKYKPMMRLDIVIPDTEESRLVA 932


>ref|XP_002520827.1| APO protein 3, mitochondrial precursor, putative [Ricinus communis]
           gi|223539958|gb|EEF41536.1| APO protein 3, mitochondrial
           precursor, putative [Ricinus communis]
          Length = 400

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 32/43 (74%), Positives = 39/43 (90%)
 Frame = -3

Query: 286 FYGKAPAVIELCMQAGAEVPLKYKPMMRLDIVVPDAEERSLVA 158
           FYGKAPAV+E+CMQAGAE+P KYKPMMRLDI++P+ +E  LVA
Sbjct: 358 FYGKAPAVVEMCMQAGAEIPEKYKPMMRLDIMIPETDEAKLVA 400


>ref|XP_002329944.1| predicted protein [Populus trichocarpa] gi|222871966|gb|EEF09097.1|
           predicted protein [Populus trichocarpa]
          Length = 302

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 32/43 (74%), Positives = 40/43 (93%)
 Frame = -3

Query: 286 FYGKAPAVIELCMQAGAEVPLKYKPMMRLDIVVPDAEERSLVA 158
           FYGKAPAV+E+CMQAGA+VP +YKPMMRLDI+VP+++E  LVA
Sbjct: 260 FYGKAPAVVEVCMQAGAQVPDRYKPMMRLDIIVPESDEAKLVA 302


>ref|XP_003548251.1| PREDICTED: APO protein 1, chloroplastic-like [Glycine max]
          Length = 438

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 29/43 (67%), Positives = 39/43 (90%)
 Frame = -3

Query: 286 FYGKAPAVIELCMQAGAEVPLKYKPMMRLDIVVPDAEERSLVA 158
           +YGKAPAV+E+CMQAGA++P +YKPMMRLDI++PD EE  ++A
Sbjct: 396 YYGKAPAVVEVCMQAGAQIPEEYKPMMRLDIIIPDTEEARMIA 438


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