BLASTX nr result

ID: Cimicifuga21_contig00033359 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00033359
         (558 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280337.1| PREDICTED: uncharacterized protein LOC100266...   224   9e-57
ref|XP_002516166.1| conserved hypothetical protein [Ricinus comm...   208   4e-52
ref|XP_002871980.1| hypothetical protein ARALYDRAFT_489043 [Arab...   205   4e-51
ref|NP_680185.1| ubiquitin carboxyl-terminal hydrolase-like prot...   202   2e-50
ref|XP_002309452.1| predicted protein [Populus trichocarpa] gi|2...   197   1e-48

>ref|XP_002280337.1| PREDICTED: uncharacterized protein LOC100266378 [Vitis vinifera]
           gi|296081739|emb|CBI20744.3| unnamed protein product
           [Vitis vinifera]
          Length = 411

 Score =  224 bits (570), Expect = 9e-57
 Identities = 113/166 (68%), Positives = 134/166 (80%)
 Frame = +3

Query: 3   GSQEFDKRAIAVMHELLSFTIEKRLVTDYLTHFRKELVMPQKLMRFFLKHCGIFYVSERG 182
           GS+EFDKRA+A+MHELLSFTIEKRLVTD+LTHFR ELVMPQKLMR  LKH GIFYVSERG
Sbjct: 247 GSREFDKRAVAIMHELLSFTIEKRLVTDHLTHFRWELVMPQKLMRLLLKHFGIFYVSERG 306

Query: 183 KRLSVYLTEAYDGSELIDKCPLVLWKEKVQRLVGYRGRKRDIKTYNEFSDMDEDANLFEA 362
           KR SV+LTEAY+GSELIDKCPLVLWKEKVQ L+GYRGRKR I+T+++ +DM  D +LFE 
Sbjct: 307 KRFSVFLTEAYEGSELIDKCPLVLWKEKVQNLIGYRGRKRRIETFDDLTDM-ADTSLFEM 365

Query: 363 NVKGESSFLEDEGEETISNLEGISIPDDSEMEVGDVLTAYKNTETS 500
           + + E+   E E  ETI  L    + DD EME+G++  AYK+ E S
Sbjct: 366 DSENENFDAELEQGETIDGLGNGLLADDVEMEIGEICNAYKDNEPS 411


>ref|XP_002516166.1| conserved hypothetical protein [Ricinus communis]
           gi|223544652|gb|EEF46168.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 413

 Score =  208 bits (530), Expect = 4e-52
 Identities = 103/166 (62%), Positives = 131/166 (78%)
 Frame = +3

Query: 3   GSQEFDKRAIAVMHELLSFTIEKRLVTDYLTHFRKELVMPQKLMRFFLKHCGIFYVSERG 182
           GS EFDKRA+A+MHELLSFTIEKRLVTD+LTHFR+E VMPQKLMR  LKH GIFYVSERG
Sbjct: 249 GSLEFDKRAVAIMHELLSFTIEKRLVTDHLTHFRREFVMPQKLMRLLLKHFGIFYVSERG 308

Query: 183 KRLSVYLTEAYDGSELIDKCPLVLWKEKVQRLVGYRGRKRDIKTYNEFSDMDEDANLFEA 362
           KR SV+LTEAY G ELI+K PLV+WKEK+  LVGYRG+++ I+T+++ SDM+ D  L E 
Sbjct: 309 KRFSVFLTEAYKGQELIEKGPLVVWKEKLLSLVGYRGKQKKIETFSDLSDMEYD-KLAEN 367

Query: 363 NVKGESSFLEDEGEETISNLEGISIPDDSEMEVGDVLTAYKNTETS 500
           N + ES  ++ E +ET+ NLE   + D+ EME+G++   YK+ + S
Sbjct: 368 NSENESISVQFEDDETMGNLESALLADNDEMEIGEINCEYKDRDVS 413


>ref|XP_002871980.1| hypothetical protein ARALYDRAFT_489043 [Arabidopsis lyrata subsp.
           lyrata] gi|297317817|gb|EFH48239.1| hypothetical protein
           ARALYDRAFT_489043 [Arabidopsis lyrata subsp. lyrata]
          Length = 448

 Score =  205 bits (521), Expect = 4e-51
 Identities = 103/161 (63%), Positives = 124/161 (77%)
 Frame = +3

Query: 3   GSQEFDKRAIAVMHELLSFTIEKRLVTDYLTHFRKELVMPQKLMRFFLKHCGIFYVSERG 182
           GS+EFDKRAIAVMHELLSFT+EKRLVTD+LTHFR+E VMPQKLMR FLKHCGIFYVSERG
Sbjct: 287 GSKEFDKRAIAVMHELLSFTLEKRLVTDHLTHFRREFVMPQKLMRIFLKHCGIFYVSERG 346

Query: 183 KRLSVYLTEAYDGSELIDKCPLVLWKEKVQRLVGYRGRKRDIKTYNEFSDMDEDANLFEA 362
           KR SV+LTE Y+G ELI+KCPL+LWKEK+ +  GYRGRKRDI TYN+  DM E+  L E+
Sbjct: 347 KRFSVFLTEGYEGPELIEKCPLILWKEKLLKFTGYRGRKRDIPTYNDTLDM-EERELLES 405

Query: 363 NVKGESSFLEDEGEETISNLEGISIPDDSEMEVGDVLTAYK 485
               E   +   G E   + + +   DD EM++G+V  AY+
Sbjct: 406 GSGDEDMSV---GFEKDDDDDDVVTDDDDEMDIGEVNDAYE 443


>ref|NP_680185.1| ubiquitin carboxyl-terminal hydrolase-like protein [Arabidopsis
           thaliana] gi|13374856|emb|CAC34490.1| putative protein
           [Arabidopsis thaliana] gi|22531217|gb|AAM97112.1|
           unknown protein [Arabidopsis thaliana]
           gi|29294056|gb|AAO73893.1| expressed protein
           [Arabidopsis thaliana] gi|110742391|dbj|BAE99118.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332005579|gb|AED92962.1| ubiquitin carboxyl-terminal
           hydrolase-like protein [Arabidopsis thaliana]
          Length = 449

 Score =  202 bits (515), Expect = 2e-50
 Identities = 101/161 (62%), Positives = 125/161 (77%)
 Frame = +3

Query: 3   GSQEFDKRAIAVMHELLSFTIEKRLVTDYLTHFRKELVMPQKLMRFFLKHCGIFYVSERG 182
           GS+EFDKRAIAVMHELLSFT+EKRLVTD+LTHFR+E VMPQKLMR FLKHCGIFYVSERG
Sbjct: 289 GSKEFDKRAIAVMHELLSFTLEKRLVTDHLTHFRREFVMPQKLMRIFLKHCGIFYVSERG 348

Query: 183 KRLSVYLTEAYDGSELIDKCPLVLWKEKVQRLVGYRGRKRDIKTYNEFSDMDEDANLFEA 362
           KR SV+LTE Y+G ELI+KCPL+LWKEK+ +  GYRGRKRDI+TY++  DM E+  L E+
Sbjct: 349 KRFSVFLTEGYEGPELIEKCPLILWKEKLLKFTGYRGRKRDIQTYSDTLDM-EERELLES 407

Query: 363 NVKGESSFLEDEGEETISNLEGISIPDDSEMEVGDVLTAYK 485
               E   +  E +    ++    + DD EM++G+V  AY+
Sbjct: 408 GSGDEDLSVGFEKDGDYDDV----VTDDDEMDIGEVNDAYE 444


>ref|XP_002309452.1| predicted protein [Populus trichocarpa] gi|222855428|gb|EEE92975.1|
           predicted protein [Populus trichocarpa]
          Length = 411

 Score =  197 bits (500), Expect = 1e-48
 Identities = 98/166 (59%), Positives = 127/166 (76%)
 Frame = +3

Query: 3   GSQEFDKRAIAVMHELLSFTIEKRLVTDYLTHFRKELVMPQKLMRFFLKHCGIFYVSERG 182
           GS EFDKRA+A+MHELLSFT+EKRLVTD+LTHFR E VMPQKLMR  LKH GIFYVSERG
Sbjct: 247 GSLEFDKRAVAIMHELLSFTLEKRLVTDHLTHFRTEFVMPQKLMRLLLKHMGIFYVSERG 306

Query: 183 KRLSVYLTEAYDGSELIDKCPLVLWKEKVQRLVGYRGRKRDIKTYNEFSDMDEDANLFEA 362
           KR SV+LTEAY+G ELI+KCPLV+WKEK+  LVGYR +K+ I T+ + SD+ ED+ L E+
Sbjct: 307 KRFSVFLTEAYEGQELIEKCPLVVWKEKLLSLVGYREKKKKILTFGDLSDL-EDSGLIES 365

Query: 363 NVKGESSFLEDEGEETISNLEGISIPDDSEMEVGDVLTAYKNTETS 500
           + + E+  +    E+T+  +E   + D+ EM +G++  A  N+E S
Sbjct: 366 SSEHENISMHFGHEDTMVGVEDALLADNDEMNIGEIGLAGWNSEKS 411


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