BLASTX nr result
ID: Cimicifuga21_contig00033330
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00033330
(696 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002533738.1| conserved hypothetical protein [Ricinus comm... 71 2e-10
ref|XP_002271158.2| PREDICTED: putative F-box/LRR-repeat protein... 64 3e-08
emb|CAN83117.1| hypothetical protein VITISV_017709 [Vitis vinifera] 64 4e-08
ref|XP_002270150.2| PREDICTED: F-box/FBD/LRR-repeat protein At1g... 60 3e-07
emb|CBI27433.3| unnamed protein product [Vitis vinifera] 60 3e-07
>ref|XP_002533738.1| conserved hypothetical protein [Ricinus communis]
gi|223526344|gb|EEF28641.1| conserved hypothetical
protein [Ricinus communis]
Length = 539
Score = 70.9 bits (172), Expect = 2e-10
Identities = 66/212 (31%), Positives = 96/212 (45%), Gaps = 13/212 (6%)
Frame = -1
Query: 696 NHSTMIKISSPNLVTLKCKGYMFKDYTLESVSAVVAVEIDTIINHIDKGLPDVPRMDGLG 517
N + IS+PNLV L+ G +++ + ++ +I + + +
Sbjct: 288 NERLRMSISTPNLVMLRIIGECLNSASIQKATHLIDAQIGICVIYTNNA----------- 336
Query: 516 FGTCLNKILRALISMESLTLSAYGFQSFLELPNMLNPGL-ISCRNLKHLKLIRWCSDAYI 340
G LN +LR L +SLT+S + Q L + + L L I R +KHLKLI S +
Sbjct: 337 DGDALNTLLRGLRHCQSLTVSTWSIQ-VLPIESTLQQQLPIPLRKVKHLKLIAAISKKEL 395
Query: 339 HPMAKLLEFFPNLE--TLVLERNETLLESELDGGD---------WGEQ-LSFQCLFCHLK 196
++ LL NLE T VL LL EL W Q L F CL LK
Sbjct: 396 ARLSCLLRSCSNLEILTAVLSGPLDLLGFELPNSATDDIFEQTFWESQTLPFPCLRNSLK 455
Query: 195 VIEIQNLERCENELKFIAFLLKNATILEKIII 100
+ + L NE++ I F+LKNA LEK+I+
Sbjct: 456 QLTVTGLMGRINEVEMIMFILKNAVALEKVIL 487
>ref|XP_002271158.2| PREDICTED: putative F-box/LRR-repeat protein At3g18150-like [Vitis
vinifera]
Length = 665
Score = 63.9 bits (154), Expect = 3e-08
Identities = 64/226 (28%), Positives = 111/226 (49%), Gaps = 28/226 (12%)
Frame = -1
Query: 687 TMIKISSPNLVTLKCKGYMFKDYTLESVSAVVAVEIDTIINHIDKGLPDVPRMDGLGFGT 508
T++++S+PN+ +L+ G K L +S++V ++D + H D+ +
Sbjct: 418 TVLEVSAPNIRSLELSGNWEKMCRLLDMSSLVNAKLDIQMMHQDRNFQYFSE----DYSN 473
Query: 507 CLNKILRALISMESLTLSAYGFQ--SFLELPNMLNPGLISCRNLKHLKLI------RWCS 352
L +IL+ L +E+LT+ + + S LE+ +M +P KH LI +W
Sbjct: 474 MLREILKQLSHVENLTVGTWCLEVLSVLEMKSMPSP------LSKHRYLILNTLPKKWD- 526
Query: 351 DAYIHPMAKLLEFFPNLETLVLERN---------ETLLESELDGGD------W-GEQLSF 220
+ +A LL+ P+LE L ++ N + + GD W E+ SF
Sbjct: 527 ---LPGIASLLKSSPDLEKLHIDVNPLNVLKFWEHQVFNNYYKYGDDHGESFWESEEKSF 583
Query: 219 QCLFCHLKVIEIQNLER--CENE--LKFIAFLLKNATILEKIIITV 94
+CL +LK+I+I + C+ + + FI FLLKNA +LEK++I V
Sbjct: 584 KCLLQNLKIIKIVGFDPGYCDIQFAIAFIEFLLKNAQVLEKMVINV 629
>emb|CAN83117.1| hypothetical protein VITISV_017709 [Vitis vinifera]
Length = 526
Score = 63.5 bits (153), Expect = 4e-08
Identities = 64/226 (28%), Positives = 110/226 (48%), Gaps = 28/226 (12%)
Frame = -1
Query: 687 TMIKISSPNLVTLKCKGYMFKDYTLESVSAVVAVEIDTIINHIDKGLPDVPRMDGLGFGT 508
T++++S+PN+ +L+ G K L +S++V ++D + H D+ +
Sbjct: 265 TVLEVSAPNIRSLELSGNWEKMCRLLDMSSLVNAKLDIQMMHQDRNFQYFSE----DYSN 320
Query: 507 CLNKILRALISMESLTLSAYGFQ--SFLELPNMLNPGLISCRNLKHLKLI------RWCS 352
L +IL+ L +E+LT+ + + S LE+ +M +P KH LI +W
Sbjct: 321 MLREILKQLSHVENLTVGTWCLEVLSVLEMKSMPSP------LSKHRYLILNTLPKKWD- 373
Query: 351 DAYIHPMAKLLEFFPNLETLVLERNETLLESELD----------GGDWGEQL------SF 220
+ +A LL+ P+LE L ++ N + + G D GE SF
Sbjct: 374 ---LPGIASLLKSSPDLEKLHIDVNPLNVLKFWEXQVFNNYYKYGDDHGESFWESEEKSF 430
Query: 219 QCLFCHLKVIEIQNLER--CENE--LKFIAFLLKNATILEKIIITV 94
+CL +LK+I+I + C+ + + FI FLLKNA +LEK++I V
Sbjct: 431 KCLLQNLKIIKIVGFDPGYCDIQFAIAFIEFLLKNAQVLEKMVINV 476
>ref|XP_002270150.2| PREDICTED: F-box/FBD/LRR-repeat protein At1g13570-like [Vitis
vinifera]
Length = 414
Score = 60.5 bits (145), Expect = 3e-07
Identities = 56/208 (26%), Positives = 98/208 (47%), Gaps = 10/208 (4%)
Frame = -1
Query: 690 STMIKISSPNLVTLKCKGYMFKDYTLESVSAVVAVEI-----DTIINHIDKGLPDVPRMD 526
S + IS+PNL L +G FK+ LE+ +V+V + D ++ H ++
Sbjct: 188 SLALNISAPNLKYLFLEGE-FKEICLENTPGLVSVTVAMYMSDDVVEHFEQS-------- 238
Query: 525 GLGFGTC-LNKILRALISMESLTLSAYGFQSFLELPNMLNPGLISCRNLKHLKLIRWCSD 349
+C K +E L Y F FL + N L I+ +LK+++L + +
Sbjct: 239 ----SSCNFIKFFGGAPHLERLIGHIY-FTKFLSIGNELGRHPITYHHLKNIELYQVSFE 293
Query: 348 AY--IHPMAKLLEFFPNLETLVLE--RNETLLESELDGGDWGEQLSFQCLFCHLKVIEIQ 181
I + +L+ + PNLE L + N ++ LD W + C F L+ +++
Sbjct: 294 DIKEILVILRLIIYSPNLEELQISGSSNTSVSPEVLDLDFWENECPLDCAFKCLQTVKMT 353
Query: 180 NLERCENELKFIAFLLKNATILEKIIIT 97
++ +E++FI FLL+N+ ILE + IT
Sbjct: 354 DISGLPHEMRFIKFLLENSPILEIMSIT 381
>emb|CBI27433.3| unnamed protein product [Vitis vinifera]
Length = 394
Score = 60.5 bits (145), Expect = 3e-07
Identities = 56/208 (26%), Positives = 98/208 (47%), Gaps = 10/208 (4%)
Frame = -1
Query: 690 STMIKISSPNLVTLKCKGYMFKDYTLESVSAVVAVEI-----DTIINHIDKGLPDVPRMD 526
S + IS+PNL L +G FK+ LE+ +V+V + D ++ H ++
Sbjct: 168 SLALNISAPNLKYLFLEGE-FKEICLENTPGLVSVTVAMYMSDDVVEHFEQS-------- 218
Query: 525 GLGFGTC-LNKILRALISMESLTLSAYGFQSFLELPNMLNPGLISCRNLKHLKLIRWCSD 349
+C K +E L Y F FL + N L I+ +LK+++L + +
Sbjct: 219 ----SSCNFIKFFGGAPHLERLIGHIY-FTKFLSIGNELGRHPITYHHLKNIELYQVSFE 273
Query: 348 AY--IHPMAKLLEFFPNLETLVLE--RNETLLESELDGGDWGEQLSFQCLFCHLKVIEIQ 181
I + +L+ + PNLE L + N ++ LD W + C F L+ +++
Sbjct: 274 DIKEILVILRLIIYSPNLEELQISGSSNTSVSPEVLDLDFWENECPLDCAFKCLQTVKMT 333
Query: 180 NLERCENELKFIAFLLKNATILEKIIIT 97
++ +E++FI FLL+N+ ILE + IT
Sbjct: 334 DISGLPHEMRFIKFLLENSPILEIMSIT 361