BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00033315
         (245 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAX62235.1| reverse transcriptase [Peperomia caperata] gi|620...   125   3e-27
gb|ABD43089.1| reverse transcriptase [Orobanche crenata]              124   6e-27
gb|AAX62236.1| reverse transcriptase [Peperomia caperata]             124   6e-27
gb|AAP53894.1| retrotransposon protein, putative, Ty3-gypsy subc...   124   6e-27
gb|ABM55240.1| retrotransposon protein [Beta vulgaris]                124   1e-26

>gb|AAX62235.1| reverse transcriptase [Peperomia caperata]
           gi|62082819|gb|AAX62237.1| reverse transcriptase
           [Peperomia caperata]
          Length = 116

 Score =  125 bits (315), Expect = 3e-27
 Identities = 59/81 (72%), Positives = 69/81 (85%)
 Frame = -1

Query: 245 LTIKNQYPLPRIDDLLDQLRGASVFSQFDLRTGYHQMGVQSDNIPLTAFRTRYDLYEFPV 66
           +TIKN+YPLPRIDDL DQL+GA+VFS+ DLR+GYHQ+ +Q  +IP TAFRTRY  YEF V
Sbjct: 15  VTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLKIQDKDIPKTAFRTRYGHYEFLV 74

Query: 65  MPFRLTNAPTFFMDLMNRLFR 3
           MPF LTNAP  FMDLMNR+FR
Sbjct: 75  MPFGLTNAPAAFMDLMNRVFR 95


>gb|ABD43089.1| reverse transcriptase [Orobanche crenata]
          Length = 143

 Score =  124 bits (312), Expect = 6e-27
 Identities = 58/80 (72%), Positives = 70/80 (87%)
 Frame = -1

Query: 245 LTIKNQYPLPRIDDLLDQLRGASVFSQFDLRTGYHQMGVQSDNIPLTAFRTRYDLYEFPV 66
           +TIKN+YPLPRIDDLLDQL+GA VFS+ DLR+GYHQ+ ++ ++IP TAFRTRY  YEF V
Sbjct: 12  VTIKNKYPLPRIDDLLDQLQGAVVFSKIDLRSGYHQLRIREEDIPKTAFRTRYGHYEFVV 71

Query: 65  MPFRLTNAPTFFMDLMNRLF 6
           MPF LTNAPT FM+LMNR+F
Sbjct: 72  MPFGLTNAPTVFMELMNRVF 91


>gb|AAX62236.1| reverse transcriptase [Peperomia caperata]
          Length = 116

 Score =  124 bits (312), Expect = 6e-27
 Identities = 58/81 (71%), Positives = 69/81 (85%)
 Frame = -1

Query: 245 LTIKNQYPLPRIDDLLDQLRGASVFSQFDLRTGYHQMGVQSDNIPLTAFRTRYDLYEFPV 66
           +TIKN+YPLPRIDDL DQL+GA+VFS+ DLR+GYHQ+ +Q  +IP TAFRTRY  YEF V
Sbjct: 16  VTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLKIQDKDIPKTAFRTRYGHYEFLV 75

Query: 65  MPFRLTNAPTFFMDLMNRLFR 3
           MPF LTNAP  FMDLMN++FR
Sbjct: 76  MPFGLTNAPAAFMDLMNKVFR 96


>gb|AAP53894.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1829

 Score =  124 bits (312), Expect = 6e-27
 Identities = 57/80 (71%), Positives = 70/80 (87%)
 Frame = -1

Query: 245  LTIKNQYPLPRIDDLLDQLRGASVFSQFDLRTGYHQMGVQSDNIPLTAFRTRYDLYEFPV 66
            +TIKN+YPLPRIDDL DQL+GA VFS+ DLR+GYHQ+ ++S++IP TAF TRY LYEF V
Sbjct: 987  VTIKNKYPLPRIDDLFDQLKGARVFSKIDLRSGYHQLKIRSEDIPKTAFSTRYGLYEFTV 1046

Query: 65   MPFRLTNAPTFFMDLMNRLF 6
            M F LTNAPTFFM+LMN++F
Sbjct: 1047 MSFGLTNAPTFFMNLMNKIF 1066


>gb|ABM55240.1| retrotransposon protein [Beta vulgaris]
          Length = 1501

 Score =  124 bits (310), Expect = 1e-26
 Identities = 58/80 (72%), Positives = 66/80 (82%)
 Frame = -1

Query: 245 LTIKNQYPLPRIDDLLDQLRGASVFSQFDLRTGYHQMGVQSDNIPLTAFRTRYDLYEFPV 66
           +TIKN+YPLPRIDDL DQL GASVFS+ DLR+GYHQ+ V   ++P TAFRTRY  YEF V
Sbjct: 622 VTIKNKYPLPRIDDLFDQLNGASVFSKIDLRSGYHQLRVADKDVPKTAFRTRYGHYEFTV 681

Query: 65  MPFRLTNAPTFFMDLMNRLF 6
           MPF LTNAP  FMDLMNR+F
Sbjct: 682 MPFGLTNAPAIFMDLMNRIF 701