BLASTX nr result

ID: Cimicifuga21_contig00033306 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00033306
         (1180 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306134.1| predicted protein [Populus trichocarpa] gi|2...    58   2e-07
ref|XP_002313012.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07
ref|XP_003527615.1| PREDICTED: uncharacterized protein LOC100815...    58   4e-07
ref|XP_003612119.1| Zinc finger CCCH domain-containing protein [...    58   4e-07
ref|XP_003612118.1| Zinc finger CCCH domain-containing protein [...    58   4e-07

>ref|XP_002306134.1| predicted protein [Populus trichocarpa] gi|222849098|gb|EEE86645.1|
           predicted protein [Populus trichocarpa]
          Length = 657

 Score = 57.8 bits (138), Expect(2) = 2e-07
 Identities = 29/56 (51%), Positives = 38/56 (67%), Gaps = 3/56 (5%)
 Frame = -3

Query: 845 PFTL*QLQNWSTKGHFPADLRIWRSSETQEYSILLIEAFGGNNIRGVP---NSYWK 687
           PF++ QL+ WS  G+FP DLRIWR++ T++ SILL EA  GN  R  P   NS+ K
Sbjct: 191 PFSMVQLRKWSNTGYFPVDLRIWRNTGTKDDSILLTEALSGNFQRDPPAVDNSFLK 246



 Score = 24.6 bits (52), Expect(2) = 2e-07
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -1

Query: 883 VWHYEDSCGRIQ 848
           +WHY+D  G+IQ
Sbjct: 178 IWHYQDPSGKIQ 189


>ref|XP_002313012.1| predicted protein [Populus trichocarpa] gi|222849420|gb|EEE86967.1|
           predicted protein [Populus trichocarpa]
          Length = 746

 Score = 60.5 bits (145), Expect(2) = 2e-07
 Identities = 26/46 (56%), Positives = 36/46 (78%)
 Frame = -3

Query: 857 ENPRPFTL*QLQNWSTKGHFPADLRIWRSSETQEYSILLIEAFGGN 720
           +N  PF++ QL+ WS  G+FPADLRIWR++ET++ SILL +A  GN
Sbjct: 192 KNQGPFSMVQLRKWSNTGYFPADLRIWRNTETKDDSILLTDALSGN 237



 Score = 21.6 bits (44), Expect(2) = 2e-07
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -1

Query: 883 VWHYEDSCGRIQ 848
           +WHY+D  G+ Q
Sbjct: 183 IWHYKDPSGKNQ 194


>ref|XP_003527615.1| PREDICTED: uncharacterized protein LOC100815079 [Glycine max]
          Length = 1421

 Score = 57.8 bits (138), Expect(2) = 4e-07
 Identities = 25/42 (59%), Positives = 32/42 (76%)
 Frame = -3

Query: 845  PFTL*QLQNWSTKGHFPADLRIWRSSETQEYSILLIEAFGGN 720
            PF++ QL  WS  G+FPADLRIWR++E Q+ SILL +A  GN
Sbjct: 882  PFSMVQLHKWSNTGYFPADLRIWRTTEKQDDSILLTDALAGN 923



 Score = 23.5 bits (49), Expect(2) = 4e-07
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = -1

Query: 883 VWHYEDSCGRIQ 848
           +WHY+D  G++Q
Sbjct: 869 MWHYQDPSGKVQ 880


>ref|XP_003612119.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
           gi|355513454|gb|AES95077.1| Zinc finger CCCH
           domain-containing protein [Medicago truncatula]
          Length = 1255

 Score = 58.2 bits (139), Expect(2) = 4e-07
 Identities = 32/83 (38%), Positives = 44/83 (53%)
 Frame = -3

Query: 845 PFTL*QLQNWSTKGHFPADLRIWRSSETQEYSILLIEAFGGNNIRGVPNSYWKNVSGLAN 666
           PF++ QL  W+  GHFP DL++WR  E Q  SILL +A  G   + VP    +N S L +
Sbjct: 741 PFSMLQLYKWNASGHFPPDLKVWRVDEKQANSILLTDALNGKCSKNVP---LRNNSLLLS 797

Query: 665 GGSQAVGMDAASSPTAGMNGMSS 597
            G+     D  SS   G N  ++
Sbjct: 798 LGANVALDDKESSQDGGRNSTTN 820



 Score = 23.1 bits (48), Expect(2) = 4e-07
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -1

Query: 880 WHYEDSCGRIQ 848
           WHY+D  G++Q
Sbjct: 729 WHYQDPSGKVQ 739


>ref|XP_003612118.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
           gi|355513453|gb|AES95076.1| Zinc finger CCCH
           domain-containing protein [Medicago truncatula]
          Length = 673

 Score = 58.2 bits (139), Expect(2) = 4e-07
 Identities = 32/83 (38%), Positives = 44/83 (53%)
 Frame = -3

Query: 845 PFTL*QLQNWSTKGHFPADLRIWRSSETQEYSILLIEAFGGNNIRGVPNSYWKNVSGLAN 666
           PF++ QL  W+  GHFP DL++WR  E Q  SILL +A  G   + VP    +N S L +
Sbjct: 159 PFSMLQLYKWNASGHFPPDLKVWRVDEKQANSILLTDALNGKCSKNVP---LRNNSLLLS 215

Query: 665 GGSQAVGMDAASSPTAGMNGMSS 597
            G+     D  SS   G N  ++
Sbjct: 216 LGANVALDDKESSQDGGRNSTTN 238



 Score = 23.1 bits (48), Expect(2) = 4e-07
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -1

Query: 880 WHYEDSCGRIQ 848
           WHY+D  G++Q
Sbjct: 147 WHYQDPSGKVQ 157


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