BLASTX nr result

ID: Cimicifuga21_contig00033299 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00033299
         (283 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004160730.1| PREDICTED: LOB domain-containing protein 21-...   117   1e-24
ref|XP_004138415.1| PREDICTED: LOB domain-containing protein 21-...   117   1e-24
ref|XP_002272821.1| PREDICTED: LOB domain-containing protein 21 ...   114   1e-23
gb|ABK93040.1| unknown [Populus trichocarpa]                          113   2e-23
ref|XP_003519427.1| PREDICTED: LOB domain-containing protein 21-...   112   4e-23

>ref|XP_004160730.1| PREDICTED: LOB domain-containing protein 21-like isoform 3 [Cucumis
           sativus]
          Length = 167

 Score =  117 bits (293), Expect = 1e-24
 Identities = 56/84 (66%), Positives = 69/84 (82%)
 Frame = +2

Query: 5   QFAKIHKVFGASNASKILNEVPQDQRGETVKSLVYEAEARLNDPVHGCIGAMALLQNRRM 184
           +FAK+HKVFGASN SKIL EVP++QR +TV SL YEAEARL DPV+GCIGA+ALLQ + +
Sbjct: 40  KFAKVHKVFGASNVSKILTEVPEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMV 99

Query: 185 QLQHDLAITRAHLACYANTSNPLS 256
           +LQHDLA+ +A LA YAN +   S
Sbjct: 100 ELQHDLALAKARLARYANNNTSSS 123


>ref|XP_004138415.1| PREDICTED: LOB domain-containing protein 21-like isoform 1 [Cucumis
           sativus] gi|449441292|ref|XP_004138416.1| PREDICTED: LOB
           domain-containing protein 21-like isoform 2 [Cucumis
           sativus] gi|449499124|ref|XP_004160728.1| PREDICTED: LOB
           domain-containing protein 21-like isoform 1 [Cucumis
           sativus] gi|449499130|ref|XP_004160729.1| PREDICTED: LOB
           domain-containing protein 21-like isoform 2 [Cucumis
           sativus]
          Length = 172

 Score =  117 bits (293), Expect = 1e-24
 Identities = 56/84 (66%), Positives = 69/84 (82%)
 Frame = +2

Query: 5   QFAKIHKVFGASNASKILNEVPQDQRGETVKSLVYEAEARLNDPVHGCIGAMALLQNRRM 184
           +FAK+HKVFGASN SKIL EVP++QR +TV SL YEAEARL DPV+GCIGA+ALLQ + +
Sbjct: 40  KFAKVHKVFGASNVSKILTEVPEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMV 99

Query: 185 QLQHDLAITRAHLACYANTSNPLS 256
           +LQHDLA+ +A LA YAN +   S
Sbjct: 100 ELQHDLALAKARLARYANNNTSSS 123


>ref|XP_002272821.1| PREDICTED: LOB domain-containing protein 21 [Vitis vinifera]
           gi|297736578|emb|CBI25449.3| unnamed protein product
           [Vitis vinifera]
          Length = 171

 Score =  114 bits (284), Expect = 1e-23
 Identities = 56/84 (66%), Positives = 68/84 (80%)
 Frame = +2

Query: 5   QFAKIHKVFGASNASKILNEVPQDQRGETVKSLVYEAEARLNDPVHGCIGAMALLQNRRM 184
           +FAK+HKVFGASN SKIL EVP++QR +TV SL YEAEARL DPV+GCIGA+ALLQ + +
Sbjct: 39  KFAKVHKVFGASNVSKILVEVPEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQRKMV 98

Query: 185 QLQHDLAITRAHLACYANTSNPLS 256
           +LQHDLAI RA LA Y   ++  S
Sbjct: 99  ELQHDLAIARARLARYTMPASSTS 122


>gb|ABK93040.1| unknown [Populus trichocarpa]
          Length = 163

 Score =  113 bits (282), Expect = 2e-23
 Identities = 56/83 (67%), Positives = 68/83 (81%)
 Frame = +2

Query: 5   QFAKIHKVFGASNASKILNEVPQDQRGETVKSLVYEAEARLNDPVHGCIGAMALLQNRRM 184
           +FA++HKVFGASN SKIL EVP++QR +TV SL YEAEARL DPV+GCIGA+ALLQ + +
Sbjct: 39  KFARVHKVFGASNVSKILIEVPEEQREDTVNSLAYEAEARLTDPVYGCIGAIALLQRKMV 98

Query: 185 QLQHDLAITRAHLACYANTSNPL 253
           +LQ DLAI RA LA YA  S P+
Sbjct: 99  ELQVDLAIARARLARYAANSPPI 121


>ref|XP_003519427.1| PREDICTED: LOB domain-containing protein 21-like [Glycine max]
          Length = 188

 Score =  112 bits (279), Expect = 4e-23
 Identities = 54/80 (67%), Positives = 66/80 (82%)
 Frame = +2

Query: 5   QFAKIHKVFGASNASKILNEVPQDQRGETVKSLVYEAEARLNDPVHGCIGAMALLQNRRM 184
           +FAK+HKVFGASN SKIL EVP++QR +TV SL YEAEARL DPV+GCIGA+ALLQ + +
Sbjct: 40  KFAKVHKVFGASNVSKILVEVPEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQRKMV 99

Query: 185 QLQHDLAITRAHLACYANTS 244
           +LQHDLAI +  LA YA  +
Sbjct: 100 ELQHDLAIAKDRLARYATAA 119


Top