BLASTX nr result

ID: Cimicifuga21_contig00033289 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00033289
         (339 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]           166   1e-39
gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas]         162   2e-38
emb|CAN76397.1| hypothetical protein VITISV_001411 [Vitis vinifera]   157   6e-37
emb|CAN61554.1| hypothetical protein VITISV_028479 [Vitis vinifera]   156   1e-36
gb|AAW22873.1| putative polyprotein [Solanum lycopersicum]            156   2e-36

>dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]
          Length = 1338

 Score =  166 bits (421), Expect = 1e-39
 Identities = 78/111 (70%), Positives = 93/111 (83%)
 Frame = +3

Query: 3    APRQWYRKFESFMTMHGYKRTSSDHCVFIQKFGPDDFVVLLLYVDNMLIVGQNKRRISKL 182
            APRQWY+KFES M  HGYK+T+SDHCVF QKF  DDF++LLLYVD+MLIVG+N  RI+ L
Sbjct: 967  APRQWYKKFESVMGQHGYKKTTSDHCVFAQKFSDDDFIILLLYVDDMLIVGRNVSRINSL 1026

Query: 183  KEDLAKSFETKDLGRARLILGMKIRRDRKQGKLWLSQEQYVEKVLKRFNME 335
            KE L+K F  KDLG A+ ILGM+I RDR+  KLWLSQE+Y+EKVL+RFNME
Sbjct: 1027 KEQLSKFFAMKDLGPAKQILGMRIMRDREAKKLWLSQEKYIEKVLQRFNME 1077


>gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas]
          Length = 1415

 Score =  162 bits (411), Expect = 2e-38
 Identities = 74/110 (67%), Positives = 94/110 (85%)
 Frame = +3

Query: 3    APRQWYRKFESFMTMHGYKRTSSDHCVFIQKFGPDDFVVLLLYVDNMLIVGQNKRRISKL 182
            APRQWY+KF S M+ HGYK+TSSDHCVF+ ++  DDFV+LLLYVD+MLIVG+N  RI +L
Sbjct: 964  APRQWYKKFTSVMSKHGYKKTSSDHCVFVNRYSDDDFVILLLYVDDMLIVGRNASRIQEL 1023

Query: 183  KEDLAKSFETKDLGRARLILGMKIRRDRKQGKLWLSQEQYVEKVLKRFNM 332
            K++L+KSF  KD+G A+ ILGMKI RDR+  KLWLSQE+Y+EKVL+RF+M
Sbjct: 1024 KQELSKSFSMKDMGPAKQILGMKIIRDRQNKKLWLSQEKYIEKVLERFHM 1073


>emb|CAN76397.1| hypothetical protein VITISV_001411 [Vitis vinifera]
          Length = 384

 Score =  157 bits (398), Expect = 6e-37
 Identities = 71/110 (64%), Positives = 89/110 (80%)
 Frame = +3

Query: 3   APRQWYRKFESFMTMHGYKRTSSDHCVFIQKFGPDDFVVLLLYVDNMLIVGQNKRRISKL 182
           APRQWY+KF+SFM  HGY RT+SDHCVF ++F  DDF++LLLYVD+MLI+  +  +I KL
Sbjct: 134 APRQWYKKFDSFMISHGYNRTTSDHCVFTKRFSDDDFIILLLYVDDMLIIDHDASKIEKL 193

Query: 183 KEDLAKSFETKDLGRARLILGMKIRRDRKQGKLWLSQEQYVEKVLKRFNM 332
           K +L+KSF  KDLG A+ ILGMKI  DRK  KLWLSQE Y+EK+L+RFN+
Sbjct: 194 KRELSKSFAMKDLGYAKQILGMKISHDRKNEKLWLSQEAYIEKILERFNI 243


>emb|CAN61554.1| hypothetical protein VITISV_028479 [Vitis vinifera]
          Length = 1144

 Score =  156 bits (395), Expect = 1e-36
 Identities = 73/112 (65%), Positives = 91/112 (81%)
 Frame = +3

Query: 3    APRQWYRKFESFMTMHGYKRTSSDHCVFIQKFGPDDFVVLLLYVDNMLIVGQNKRRISKL 182
            APRQWY+KFES M   GY++T+SDHCVF+QKF  +DFV+ LLYVD++LIVG+N  RI KL
Sbjct: 792  APRQWYKKFESVMGEQGYRKTTSDHCVFVQKFSDNDFVIFLLYVDDILIVGRNVSRIDKL 851

Query: 183  KEDLAKSFETKDLGRARLILGMKIRRDRKQGKLWLSQEQYVEKVLKRFNMEN 338
            K+ L KSF  KDLG A+ ILG++I RDR   KL++SQEQY+EKVL+RFNM N
Sbjct: 852  KKQLRKSFSMKDLGPAKKILGIRIERDRASKKLYMSQEQYIEKVLERFNMSN 903


>gb|AAW22873.1| putative polyprotein [Solanum lycopersicum]
          Length = 687

 Score =  156 bits (394), Expect = 2e-36
 Identities = 72/112 (64%), Positives = 93/112 (83%)
 Frame = +3

Query: 3   APRQWYRKFESFMTMHGYKRTSSDHCVFIQKFGPDDFVVLLLYVDNMLIVGQNKRRISKL 182
           APRQWY KF+SFM+ + YKRT++D CV+ +KF   +F++L LYVD+MLIVGQ+   I +L
Sbjct: 326 APRQWYHKFDSFMSNNEYKRTTADPCVYFRKFSEGNFIILCLYVDDMLIVGQDVEMICRL 385

Query: 183 KEDLAKSFETKDLGRARLILGMKIRRDRKQGKLWLSQEQYVEKVLKRFNMEN 338
           KEDL+KSF+ KDLG A+ ILGM+I RDRK GKLWLSQE Y+E+VL+RFNM+N
Sbjct: 386 KEDLSKSFDMKDLGPAKQILGMEIARDRKAGKLWLSQENYIERVLERFNMKN 437


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