BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00033213
         (442 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521483.1| conserved hypothetical protein [Ricinus comm...    91   1e-16
ref|XP_002272412.2| PREDICTED: uncharacterized protein LOC100254...    88   6e-16
emb|CBI34848.3| unnamed protein product [Vitis vinifera]               88   6e-16
ref|NP_189392.1| RNA-binding CRS1 / YhbY (CRM) domain protein [A...    85   5e-15
ref|XP_002877058.1| hypothetical protein ARALYDRAFT_484545 [Arab...    84   1e-14

>ref|XP_002521483.1| conserved hypothetical protein [Ricinus communis]
           gi|223539382|gb|EEF40973.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 745

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 57/129 (44%), Positives = 78/129 (60%), Gaps = 17/129 (13%)
 Frame = +3

Query: 105 ATKKLHRHCLNTLYFSLPHN-----------TKTRLHLGDSCPKFLARNV-----FDEMS 236
           A ++ H HC  TL   L  N           T T+L    +C   + +NV     F    
Sbjct: 3   AARRFHSHCFKTLSSLLLSNPNRNAMLVKDVTSTKL----ACINLMQQNVSCEYGFPSFL 58

Query: 237 ERKYPISWFNGS-RSMSTARGRSMRSKVEKLMRRDVGRTQKEIRKARNLRKKLMTDEERL 413
              +P +  NGS R MST++GRSMRSKVE+ M+++ G+T +EIR+A+ L+KKLMTDEERL
Sbjct: 59  PLDHPFN--NGSCRGMSTSKGRSMRSKVERRMQKESGKTLREIRRAKKLKKKLMTDEERL 116

Query: 414 IWNLRRAKK 440
           I+NL+RAKK
Sbjct: 117 IYNLKRAKK 125


>ref|XP_002272412.2| PREDICTED: uncharacterized protein LOC100254349 [Vitis vinifera]
          Length = 666

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 46/73 (63%), Positives = 60/73 (82%), Gaps = 1/73 (1%)
 Frame = +3

Query: 225 DEMSERKYPISWFNG-SRSMSTARGRSMRSKVEKLMRRDVGRTQKEIRKARNLRKKLMTD 401
           ++ S    P + F+G SR+MSTA GRSMRSKVE+ MR++ G+T +E+R+A+ LRKKLMTD
Sbjct: 35  EDCSSSISPWNGFSGWSRAMSTAGGRSMRSKVERRMRKESGKTLREVRRAQKLRKKLMTD 94

Query: 402 EERLIWNLRRAKK 440
           EERLI+NLRRAKK
Sbjct: 95  EERLIYNLRRAKK 107


>emb|CBI34848.3| unnamed protein product [Vitis vinifera]
          Length = 545

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 46/73 (63%), Positives = 60/73 (82%), Gaps = 1/73 (1%)
 Frame = +3

Query: 225 DEMSERKYPISWFNG-SRSMSTARGRSMRSKVEKLMRRDVGRTQKEIRKARNLRKKLMTD 401
           ++ S    P + F+G SR+MSTA GRSMRSKVE+ MR++ G+T +E+R+A+ LRKKLMTD
Sbjct: 50  EDCSSSISPWNGFSGWSRAMSTAGGRSMRSKVERRMRKESGKTLREVRRAQKLRKKLMTD 109

Query: 402 EERLIWNLRRAKK 440
           EERLI+NLRRAKK
Sbjct: 110 EERLIYNLRRAKK 122


>ref|NP_189392.1| RNA-binding CRS1 / YhbY (CRM) domain protein [Arabidopsis thaliana]
           gi|11994182|dbj|BAB01285.1| unnamed protein product
           [Arabidopsis thaliana] gi|332643815|gb|AEE77336.1|
           RNA-binding CRS1 / YhbY (CRM) domain protein
           [Arabidopsis thaliana]
          Length = 491

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 41/57 (71%), Positives = 51/57 (89%)
 Frame = +3

Query: 270 SRSMSTARGRSMRSKVEKLMRRDVGRTQKEIRKARNLRKKLMTDEERLIWNLRRAKK 440
           SR MST+RGRSMRSKVE  MR++ G+T +EIR+A+ L+KKLMTDEERLI+NL+RAKK
Sbjct: 9   SRGMSTSRGRSMRSKVESRMRKESGKTLREIRRAKKLKKKLMTDEERLIYNLKRAKK 65


>ref|XP_002877058.1| hypothetical protein ARALYDRAFT_484545 [Arabidopsis lyrata subsp.
           lyrata] gi|297322896|gb|EFH53317.1| hypothetical protein
           ARALYDRAFT_484545 [Arabidopsis lyrata subsp. lyrata]
          Length = 488

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 40/56 (71%), Positives = 51/56 (91%)
 Frame = +3

Query: 273 RSMSTARGRSMRSKVEKLMRRDVGRTQKEIRKARNLRKKLMTDEERLIWNLRRAKK 440
           R+MST+RGRSMRSKVE  MR++ G+T +EIR+A+ L+KKLMTDEERLI+NL+RAKK
Sbjct: 10  RAMSTSRGRSMRSKVESRMRKESGKTLREIRRAKKLKKKLMTDEERLIYNLKRAKK 65