BLASTX nr result

ID: Cimicifuga21_contig00033211 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00033211
         (631 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269839.1| PREDICTED: putative copper-transporting ATPa...   108   5e-29
ref|XP_002303580.1| heavy metal ATPase [Populus trichocarpa] gi|...   105   8e-29
ref|XP_002509783.1| copper-transporting atpase p-type, putative ...   105   2e-28
ref|XP_002299540.1| heavy metal ATPase [Populus trichocarpa] gi|...   103   2e-28
ref|XP_002269758.2| PREDICTED: putative copper-transporting ATPa...   104   4e-28

>ref|XP_002269839.1| PREDICTED: putative copper-transporting ATPase 3-like [Vitis
           vinifera]
          Length = 984

 Score =  108 bits (269), Expect(2) = 5e-29
 Identities = 56/78 (71%), Positives = 63/78 (80%)
 Frame = -2

Query: 549 LKVLRGSKVASDCFVIWGQSHVNESMTTGEALPVAMRKCDDVIGGVSNENGVLHLQATRV 370
           +K+L G+KVASD FVIWGQSHVNESM TGEA PVA RK D VIGG  NENGVLH++ATRV
Sbjct: 464 IKILPGAKVASDGFVIWGQSHVNESMITGEARPVAKRKGDTVIGGTVNENGVLHIKATRV 523

Query: 369 GSKSAPLQIVQTVAVNQL 316
           GS+SA  QIVQ V   Q+
Sbjct: 524 GSESALSQIVQLVESAQM 541



 Score = 45.4 bits (106), Expect(2) = 5e-29
 Identities = 21/29 (72%), Positives = 26/29 (89%)
 Frame = -1

Query: 631 VLLTLDNDGNVTSGEEIDSRLIRKNDVIK 545
           +LL LD++GNV + EEIDSRLI+KNDVIK
Sbjct: 437 ILLALDSEGNVINEEEIDSRLIQKNDVIK 465


>ref|XP_002303580.1| heavy metal ATPase [Populus trichocarpa]
           gi|222841012|gb|EEE78559.1| heavy metal ATPase [Populus
           trichocarpa]
          Length = 987

 Score =  105 bits (262), Expect(2) = 8e-29
 Identities = 53/78 (67%), Positives = 63/78 (80%)
 Frame = -2

Query: 549 LKVLRGSKVASDCFVIWGQSHVNESMTTGEALPVAMRKCDDVIGGVSNENGVLHLQATRV 370
           +K++ G+K+ASD FVIWGQSHVNESM TGEA PVA RK D VIGG  NENGVLH++ATRV
Sbjct: 467 IKIIPGAKIASDGFVIWGQSHVNESMITGEARPVAKRKGDTVIGGTVNENGVLHIKATRV 526

Query: 369 GSKSAPLQIVQTVAVNQL 316
           GS+SA  QIV+ V   Q+
Sbjct: 527 GSESALSQIVRLVESAQM 544



 Score = 47.4 bits (111), Expect(2) = 8e-29
 Identities = 22/29 (75%), Positives = 27/29 (93%)
 Frame = -1

Query: 631 VLLTLDNDGNVTSGEEIDSRLIRKNDVIK 545
           +LLTLD+ GNV+S EEIDSRLI++NDVIK
Sbjct: 440 ILLTLDDQGNVSSEEEIDSRLIQRNDVIK 468


>ref|XP_002509783.1| copper-transporting atpase p-type, putative [Ricinus communis]
           gi|223549682|gb|EEF51170.1| copper-transporting atpase
           p-type, putative [Ricinus communis]
          Length = 987

 Score =  105 bits (262), Expect(2) = 2e-28
 Identities = 53/78 (67%), Positives = 63/78 (80%)
 Frame = -2

Query: 549 LKVLRGSKVASDCFVIWGQSHVNESMTTGEALPVAMRKCDDVIGGVSNENGVLHLQATRV 370
           +K++ G+KVASD FVIWGQSHVNESM TGEA PVA RK D VIGG  NENGV+H++ATRV
Sbjct: 467 IKIIPGAKVASDGFVIWGQSHVNESMITGEARPVAKRKGDPVIGGTVNENGVMHIKATRV 526

Query: 369 GSKSAPLQIVQTVAVNQL 316
           GS+SA  QIV+ V   Q+
Sbjct: 527 GSESALAQIVRLVESAQM 544



 Score = 45.8 bits (107), Expect(2) = 2e-28
 Identities = 22/29 (75%), Positives = 25/29 (86%)
 Frame = -1

Query: 631 VLLTLDNDGNVTSGEEIDSRLIRKNDVIK 545
           +LLTLD+ GNV   EEIDSRLI+KNDVIK
Sbjct: 440 ILLTLDDKGNVIDEEEIDSRLIQKNDVIK 468


>ref|XP_002299540.1| heavy metal ATPase [Populus trichocarpa]
           gi|222846798|gb|EEE84345.1| heavy metal ATPase [Populus
           trichocarpa]
          Length = 965

 Score =  103 bits (258), Expect(2) = 2e-28
 Identities = 53/78 (67%), Positives = 62/78 (79%)
 Frame = -2

Query: 549 LKVLRGSKVASDCFVIWGQSHVNESMTTGEALPVAMRKCDDVIGGVSNENGVLHLQATRV 370
           +K++ G+K ASD FVIWGQSHVNESM TGEA PVA RK D VIGG  NENGVLH++ATRV
Sbjct: 445 IKIVPGAKAASDGFVIWGQSHVNESMITGEARPVAKRKGDTVIGGTVNENGVLHIKATRV 504

Query: 369 GSKSAPLQIVQTVAVNQL 316
           GS+SA  QIV+ V   Q+
Sbjct: 505 GSESALSQIVRLVESAQM 522



 Score = 47.4 bits (111), Expect(2) = 2e-28
 Identities = 22/29 (75%), Positives = 27/29 (93%)
 Frame = -1

Query: 631 VLLTLDNDGNVTSGEEIDSRLIRKNDVIK 545
           +LLTLD++GNV S EEIDSRLI++NDVIK
Sbjct: 418 ILLTLDDEGNVISEEEIDSRLIQRNDVIK 446


>ref|XP_002269758.2| PREDICTED: putative copper-transporting ATPase 3-like [Vitis
           vinifera]
          Length = 965

 Score =  104 bits (260), Expect(2) = 4e-28
 Identities = 54/78 (69%), Positives = 63/78 (80%)
 Frame = -2

Query: 549 LKVLRGSKVASDCFVIWGQSHVNESMTTGEALPVAMRKCDDVIGGVSNENGVLHLQATRV 370
           +K+L G+KVASD FVIWGQSHVNESM TGEA PVA RK D VIGG  NE+GVLH++AT+V
Sbjct: 445 IKILPGAKVASDGFVIWGQSHVNESMITGEARPVAKRKGDTVIGGTVNEDGVLHVEATQV 504

Query: 369 GSKSAPLQIVQTVAVNQL 316
           GS+SA  QIVQ V   Q+
Sbjct: 505 GSESALSQIVQLVESAQM 522



 Score = 45.8 bits (107), Expect(2) = 4e-28
 Identities = 22/29 (75%), Positives = 26/29 (89%)
 Frame = -1

Query: 631 VLLTLDNDGNVTSGEEIDSRLIRKNDVIK 545
           +LLTLD +GNV + EEIDSRLI+KNDVIK
Sbjct: 418 ILLTLDCEGNVITEEEIDSRLIQKNDVIK 446


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