BLASTX nr result

ID: Cimicifuga21_contig00033198 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00033198
         (398 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAA18527.1| proline-rich protein [Daucus carota]                    93   3e-17
prf||1108300B protein 33kD,Pro rich                                    90   2e-16
sp|P06600.1|PRP33_DAUCA RecName: Full=Proline-rich 33 kDa extens...    90   2e-16

>gb|AAA18527.1| proline-rich protein [Daucus carota]
          Length = 235

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 46/81 (56%), Positives = 47/81 (58%)
 Frame = -2

Query: 385 QPIQKPPVHKPPTEHKPPVHEPATGEHKPSPVYQXXXXXXXXXXXXXXXXXXXXXXXXXX 206
           QPI +PPVHKPPTEHKPPVHEPAT EHKPSPVYQ                          
Sbjct: 156 QPIHRPPVHKPPTEHKPPVHEPAT-EHKPSPVYQPPKTEKPVPEHKPPHLPPIVVRPPPT 214

Query: 205 XXXXXPYGQHPGHPPVENTGN 143
                PYG HPGHPPVENTGN
Sbjct: 215 HKPNPPYGHHPGHPPVENTGN 235


>prf||1108300B protein 33kD,Pro rich
          Length = 211

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 45/81 (55%), Positives = 46/81 (56%)
 Frame = -2

Query: 385 QPIQKPPVHKPPTEHKPPVHEPATGEHKPSPVYQXXXXXXXXXXXXXXXXXXXXXXXXXX 206
           QPI +PPVHKPPTEHKPPVHEPAT EHKPSPVYQ                          
Sbjct: 132 QPIHRPPVHKPPTEHKPPVHEPAT-EHKPSPVYQPPKTEKPVPEHKPPHLPPIVVRPPPT 190

Query: 205 XXXXXPYGQHPGHPPVENTGN 143
                PYG HP HPPVENTGN
Sbjct: 191 HKPNPPYGHHPRHPPVENTGN 211


>sp|P06600.1|PRP33_DAUCA RecName: Full=Proline-rich 33 kDa extensin-related protein; Flags:
           Precursor gi|167558|gb|AAA33138.1| 33-kDa protein,
           partial [Daucus carota]
          Length = 211

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 45/81 (55%), Positives = 46/81 (56%)
 Frame = -2

Query: 385 QPIQKPPVHKPPTEHKPPVHEPATGEHKPSPVYQXXXXXXXXXXXXXXXXXXXXXXXXXX 206
           QPI +PPVHKPPTEHKPPVHEPAT EHKPSPVYQ                          
Sbjct: 132 QPIHRPPVHKPPTEHKPPVHEPAT-EHKPSPVYQPPKTEKPVPEHKPPHLPPIVVRPPPT 190

Query: 205 XXXXXPYGQHPGHPPVENTGN 143
                PYG HP HPPVENTGN
Sbjct: 191 HKPNPPYGHHPRHPPVENTGN 211


Top