BLASTX nr result

ID: Cimicifuga21_contig00033196 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00033196
         (370 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522229.1| conserved hypothetical protein [Ricinus comm...    82   5e-14
emb|CBI30704.3| unnamed protein product [Vitis vinifera]               80   1e-13
ref|XP_002265875.2| PREDICTED: DUF246 domain-containing protein ...    79   3e-13
ref|XP_003547176.1| PREDICTED: DUF246 domain-containing protein ...    75   7e-12
ref|XP_003541696.1| PREDICTED: DUF246 domain-containing protein ...    72   5e-11

>ref|XP_002522229.1| conserved hypothetical protein [Ricinus communis]
           gi|223538482|gb|EEF40087.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 598

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 42/77 (54%), Positives = 51/77 (66%)
 Frame = -1

Query: 271 IKIKVGNGLV*SSCSDGFRKDEMSGLTDEQKTPVVLYGRLLNLASSALAEKEFKHHSSTP 92
           I ++VG+    SS      K+E      E+K PV +Y RLLNLASSALAEKEFK   S  
Sbjct: 109 INVQVGS----SSRKSSRFKEERIAYNSEEKPPVQMYSRLLNLASSALAEKEFKREKSNF 164

Query: 91  WEEPYKQASAWKPCADQ 41
           WEEPY++AS WKPCAD+
Sbjct: 165 WEEPYQKASVWKPCADK 181


>emb|CBI30704.3| unnamed protein product [Vitis vinifera]
          Length = 629

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 38/63 (60%), Positives = 48/63 (76%)
 Frame = -1

Query: 229 SDGFRKDEMSGLTDEQKTPVVLYGRLLNLASSALAEKEFKHHSSTPWEEPYKQASAWKPC 50
           S G ++D+     +E+K+PV++Y RLLNLASSALAEKEFK  S   WEEPY+ AS WKPC
Sbjct: 125 SSGLKEDK--SYPNEEKSPVLMYDRLLNLASSALAEKEFKQDSLNFWEEPYRHASVWKPC 182

Query: 49  ADQ 41
           AD+
Sbjct: 183 ADR 185


>ref|XP_002265875.2| PREDICTED: DUF246 domain-containing protein At1g04910-like [Vitis
           vinifera]
          Length = 628

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 39/59 (66%), Positives = 45/59 (76%), Gaps = 5/59 (8%)
 Frame = -1

Query: 202 SGLTD-----EQKTPVVLYGRLLNLASSALAEKEFKHHSSTPWEEPYKQASAWKPCADQ 41
           SGL D     E+K+PV++Y RLLNLASSALAEKEFK  S   WEEPY+ AS WKPCAD+
Sbjct: 126 SGLKDKSYPNEEKSPVLMYDRLLNLASSALAEKEFKQDSLNFWEEPYRHASVWKPCADR 184


>ref|XP_003547176.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Glycine
           max]
          Length = 583

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 35/60 (58%), Positives = 44/60 (73%)
 Frame = -1

Query: 184 QKTPVVLYGRLLNLASSALAEKEFKHHSSTPWEEPYKQASAWKPCADQHNLLPEDKPTKN 5
           +++PV +Y RLLNLASSALAEKEFK  SS  W EP++QAS WKPCA++       KP +N
Sbjct: 95  KQSPVYMYERLLNLASSALAEKEFKQESSNLWVEPFRQASLWKPCAERKVQTNPRKPVQN 154


>ref|XP_003541696.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Glycine
           max]
          Length = 583

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 33/60 (55%), Positives = 43/60 (71%)
 Frame = -1

Query: 184 QKTPVVLYGRLLNLASSALAEKEFKHHSSTPWEEPYKQASAWKPCADQHNLLPEDKPTKN 5
           +++PV +Y RLLNLASSALAEKEFK  SS  W E ++QAS WKPC+++       KP +N
Sbjct: 95  KRSPVYMYERLLNLASSALAEKEFKQESSNLWVETFRQASLWKPCSERKTQTNPRKPVQN 154


Top