BLASTX nr result

ID: Cimicifuga21_contig00033179 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00033179
         (237 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003528429.1| PREDICTED: uncharacterized protein LOC100792...    57   2e-06

>ref|XP_003528429.1| PREDICTED: uncharacterized protein LOC100792028 [Glycine max]
          Length = 397

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 31/78 (39%), Positives = 46/78 (58%), Gaps = 2/78 (2%)
 Frame = -3

Query: 232 LRYE--HSKIESGWHWRSRGLIMEGNGGNMASSLPQGIVQPTSDLELRPLWTSSKPRFQP 59
           L+Y+    +I+  W++R          GN+   LP+GI+Q TSD ELRPLW+ S  R + 
Sbjct: 38  LKYQSYQEEIDKQWNFREDEKASSETSGNL-KGLPRGIIQATSDFELRPLWSPSSLRSKV 96

Query: 58  NSVKSIAKMAVPVGLKQK 5
           +   +   +AVPVG+KQK
Sbjct: 97  SVYSNRNLLAVPVGIKQK 114


Top